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The map label for this gene is rplGA [H]

Identifier: 226223925

GI number: 226223925

Start: 1337056

End: 1337355

Strand: Direct

Name: rplGA [H]

Synonym: Lm4b_01332

Alternate gene names: 226223925

Gene position: 1337056-1337355 (Clockwise)

Preceding gene: 226223924

Following gene: 226223926

Centisome position: 45.9

GC content: 39.33

Gene sequence:

>300_bases
ATGGATAAAAAAGCACTTTCCTTATTAGGCCTCGCTAACCGAGCACGTAAAATTACCACTGGTGAAGAATTAGTACTAAA
AGCAGTTAGAAATGGGAAAGCAAAAATGGTTCTCATTTCAGAAGATATATCCGAAAAAACCGAGAAAACAATCCGCAACA
AGTGTGAATACTACAATGTTGTCGTGAAAAAAGCCGGTACCCGGGAAATGATAGGGGGTGCAATCGGCAAAGACACACGT
GCAATAGTTGCCATACTTGATAAAGGATTTGCTGTTAAATTAGCAGAATTACTCGGTTGA

Upstream 100 bases:

>100_bases
AAAAAGAAAAACGCCATTTTTCATCAACTAAAAATGCCGGAACAAGAGTCCTTTTATGATGAGTTAATTACTTATGTGAA
GTCTCTCGAGGAACCAACGA

Downstream 100 bases:

>100_bases
ATCTTATACGGAGGTGTACGACATGAGTAAAGTTCGTGTATATGAATACGCAAAAGAACATCAAGTATCAAGCAAAAAAG
TCATTGAAGCATTAAAAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MDKKALSLLGLANRARKITTGEELVLKAVRNGKAKMVLISEDISEKTEKTIRNKCEYYNVVVKKAGTREMIGGAIGKDTR
AIVAILDKGFAVKLAELLG

Sequences:

>Translated_99_residues
MDKKALSLLGLANRARKITTGEELVLKAVRNGKAKMVLISEDISEKTEKTIRNKCEYYNVVVKKAGTREMIGGAIGKDTR
AIVAILDKGFAVKLAELLG
>Mature_99_residues
MDKKALSLLGLANRARKITTGEELVLKAVRNGKAKMVLISEDISEKTEKTIRNKCEYYNVVVKKAGTREMIGGAIGKDTR
AIVAILDKGFAVKLAELLG

Specific function: Unknown

COG id: COG1358

COG function: function code J; Ribosomal protein HS6-type (S12/L30/L7a)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L7Ae family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004038
- InterPro:   IPR004037 [H]

Pfam domain/function: PF01248 Ribosomal_L7Ae [H]

EC number: NA

Molecular weight: Translated: 10776; Mature: 10776

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKALSLLGLANRARKITTGEELVLKAVRNGKAKMVLISEDISEKTEKTIRNKCEYYNV
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHH
VVKKAGTREMIGGAIGKDTRAIVAILDKGFAVKLAELLG
HHHCCCCHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHCC
>Mature Secondary Structure
MDKKALSLLGLANRARKITTGEELVLKAVRNGKAKMVLISEDISEKTEKTIRNKCEYYNV
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHH
VVKKAGTREMIGGAIGKDTRAIVAILDKGFAVKLAELLG
HHHCCCCHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8491709; 9384377 [H]