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The map label for this gene is ylxR [H]

Identifier: 226223924

GI number: 226223924

Start: 1336779

End: 1337063

Strand: Direct

Name: ylxR [H]

Synonym: Lm4b_01331

Alternate gene names: 226223924

Gene position: 1336779-1337063 (Clockwise)

Preceding gene: 226223923

Following gene: 226223925

Centisome position: 45.89

GC content: 39.3

Gene sequence:

>285_bases
ATGCGTAATAAAAAAATCCCCCTTCGAAAATGTATTATTACCGGTGAACGCTTGCCAAAAGGCGAACTTCTTCGTATTGC
GTATTCGAAAGACGGAGCGCTTACGATAGATCCTACAGGCAAAGCACCTGGACGCGGTTTCTACATTATTAAAAGTGTAG
AAGTATGCGAAAAAGCGAAAAAGAAAAACGCCATTTTTCATCAACTAAAAATGCCGGAACAAGAGTCCTTTTATGATGAG
TTAATTACTTATGTGAAGTCTCTCGAGGAACCAACGAATGGATAA

Upstream 100 bases:

>100_bases
AACTAGGCATCTATCCTCGTAATGACGTAGAAGCGCCAGAAGTGGAAGATGCAGAGAGCGAAACTTATACAGAAGATGAA
GAGTAAAAAGGAGAATTATC

Downstream 100 bases:

>100_bases
AAAAGCACTTTCCTTATTAGGCCTCGCTAACCGAGCACGTAAAATTACCACTGGTGAAGAATTAGTACTAAAAGCAGTTA
GAAATGGGAAAGCAAAAATG

Product: hypothetical protein

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MRNKKIPLRKCIITGERLPKGELLRIAYSKDGALTIDPTGKAPGRGFYIIKSVEVCEKAKKKNAIFHQLKMPEQESFYDE
LITYVKSLEEPTNG

Sequences:

>Translated_94_residues
MRNKKIPLRKCIITGERLPKGELLRIAYSKDGALTIDPTGKAPGRGFYIIKSVEVCEKAKKKNAIFHQLKMPEQESFYDE
LITYVKSLEEPTNG
>Mature_94_residues
MRNKKIPLRKCIITGERLPKGELLRIAYSKDGALTIDPTGKAPGRGFYIIKSVEVCEKAKKKNAIFHQLKMPEQESFYDE
LITYVKSLEEPTNG

Specific function: Unknown

COG id: COG2740

COG function: function code K; Predicted nucleic-acid-binding protein implicated in transcription termination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007393 [H]

Pfam domain/function: PF04296 DUF448 [H]

EC number: NA

Molecular weight: Translated: 10684; Mature: 10684

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNKKIPLRKCIITGERLPKGELLRIAYSKDGALTIDPTGKAPGRGFYIIKSVEVCEKAK
CCCCCCCHHHHEECCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCEEEEEHHHHHHHHH
KKNAIFHQLKMPEQESFYDELITYVKSLEEPTNG
HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRNKKIPLRKCIITGERLPKGELLRIAYSKDGALTIDPTGKAPGRGFYIIKSVEVCEKAK
CCCCCCCHHHHEECCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCEEEEEHHHHHHHHH
KKNAIFHQLKMPEQESFYDELITYVKSLEEPTNG
HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8491709; 9384377 [H]