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The map label for this gene is 226223140

Identifier: 226223140

GI number: 226223140

Start: 546155

End: 546586

Strand: Direct

Name: 226223140

Synonym: Lm4b_00537

Alternate gene names: NA

Gene position: 546155-546586 (Clockwise)

Preceding gene: 226223139

Following gene: 226223144

Centisome position: 18.75

GC content: 38.43

Gene sequence:

>432_bases
ATGGAAAAATATCATCGCATTCTTGTAGCAGTGGATGGTTCTGAACCAGCAAAATTAGCCTTTGAAAAGGGACTGAAATT
AGCACTCAAACTAGACGGCGTGCTTGGAATTGCTAGTATTGTCGATTTACGTGCCTTTTCCCCGAATGTTTCTTATGATG
GTAGCTTAGAAGAAAAAGCCGAACTAGAATTAAAAACGAGCGTTAATGAATACGCAGAAAAAGCTAGAACGGCAGGAGTG
AAACAAGTAGAAACTTTTGTTGCTAAAGGTAATCCGAAAATCTTACTTTCCACAGATATTCCAGCAGAGTTCCAAGCAGA
TTTAATTATTTGCGGAGCGACTGGGATGAACCGAGTAGAAAAGCTAGTTCTTGGTAGTGTTTCTTCTTATATTATGGCTC
ATGCAATTTGCGATACTTTAATAGCTAGATAA

Upstream 100 bases:

>100_bases
GTTATTGTGAATTCATTAGCAAAAAGAATGAATGGCAGGCCTAAAATCATTTTTATAGGGTATGGAATACTATAAGAAAA
GTTGTAGGAGGTTTTATATG

Downstream 100 bases:

>100_bases
AAAAAGCGTAGATATCTTTGTTAGAAGATATCTACGCTTTTTATTATCAAAATGGATCGAAGTAAGTGTATTCTGTTACG
CCGCCCTCGATAGGTTTACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MEKYHRILVAVDGSEPAKLAFEKGLKLALKLDGVLGIASIVDLRAFSPNVSYDGSLEEKAELELKTSVNEYAEKARTAGV
KQVETFVAKGNPKILLSTDIPAEFQADLIICGATGMNRVEKLVLGSVSSYIMAHAICDTLIAR

Sequences:

>Translated_143_residues
MEKYHRILVAVDGSEPAKLAFEKGLKLALKLDGVLGIASIVDLRAFSPNVSYDGSLEEKAELELKTSVNEYAEKARTAGV
KQVETFVAKGNPKILLSTDIPAEFQADLIICGATGMNRVEKLVLGSVSSYIMAHAICDTLIAR
>Mature_143_residues
MEKYHRILVAVDGSEPAKLAFEKGLKLALKLDGVLGIASIVDLRAFSPNVSYDGSLEEKAELELKTSVNEYAEKARTAGV
KQVETFVAKGNPKILLSTDIPAEFQADLIICGATGMNRVEKLVLGSVSSYIMAHAICDTLIAR

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 15410; Mature: 15410

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKYHRILVAVDGSEPAKLAFEKGLKLALKLDGVLGIASIVDLRAFSPNVSYDGSLEEKA
CCCCEEEEEEECCCCCHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCHH
ELELKTSVNEYAEKARTAGVKQVETFVAKGNPKILLSTDIPAEFQADLIICGATGMNRVE
HHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCHHHHH
KLVLGSVSSYIMAHAICDTLIAR
HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEKYHRILVAVDGSEPAKLAFEKGLKLALKLDGVLGIASIVDLRAFSPNVSYDGSLEEKA
CCCCEEEEEEECCCCCHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCHH
ELELKTSVNEYAEKARTAGVKQVETFVAKGNPKILLSTDIPAEFQADLIICGATGMNRVE
HHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCHHHHH
KLVLGSVSSYIMAHAICDTLIAR
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11418146 [H]