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The map label for this gene is sgcC [H]

Identifier: 226223133

GI number: 226223133

Start: 538662

End: 539933

Strand: Direct

Name: sgcC [H]

Synonym: Lm4b_00530

Alternate gene names: 226223133

Gene position: 538662-539933 (Clockwise)

Preceding gene: 226223132

Following gene: 226223134

Centisome position: 18.49

GC content: 40.25

Gene sequence:

>1272_bases
ATGGATATTATTCTAGATTTCTTTAAATATATTATCGGGCTTGGTGTAACAGTTATGATGCCGATTATCATTACCATTCT
AGGTGTGATTTTCCGCAAAAAAATTAGTGTAGCTTTTAAAGCGGGGCTAACAGTTGGTGTTGGGTTTGTTGGACTAGGCG
TTATCACTTCACTCATGTTAACGACTATTACACCAGTTACAAAAGCACTTGTAGAAAATTATAATTTTAAATTAACCGCA
ACGGATATCGGTTGGGGAGTTGGGTCATCACTCGCATGGGGAACAGAAGTCGTACCATTTGTTTTCGTCGCAATTATTGC
AACCAATATTTTAATGATTGCCTTTAAATGGACGAAAACAATGGACGTAGATATTTGGAATTACTGGCAACCACTTTTCA
TCGCCAGTGCACTTTACTTAACAACAGGAAGCATGATTATTGCGATTCTTAGTTCGATTATCAATATGGCAATTATCTTC
AAAATTGCTGACTGGACACAAAAAGATGTGGAGAATGTATTAGGATTAGAGGGGATTTCTTTACCACAAATTCAAACTAC
CGGGTGGGCGCTTGTTGGTTATCCAATGAACTGGCTACTCGGAAAAATTCCCGGCGTTAGAAAAATTAATTGGTCCACAG
AGAAAGTGCAATCACGTTTAGGTATTTTCGGCGAACCAATGCTTATGGGCTTAATTATTGGTGGTGGACTTGCTGCCATT
GCTCAAATGCCGCTGAGCCAAGTACTGCAAACCGGAGTAACGATTGCCGCTAGTTTAGTACTTATTCCGCGGATGGTTTC
CCTTCTAATGGACGGTCTTACGGTTATCTCGGAAGCTGCCCATGAATTCATGGAAAAACGTTTCCCAGGTCGCGAACTAT
TTATCGGACTAGATTCAGCGGTGGGGATTGGTCATCCATTTGTACTTTCGCTTGGCTTACTCATGATCCCGATTACTTTG
ATTTTAGCGTTCATTTTGCCAGGAAATAAAGTATTACCTTTAGCTGATTTAACGGCGCTTCCATTCTACATGATTTTTGC
TATTGTTCCATCCAAAGGGAATTTATTTAGAGGGATTTTCACAGGTATTGTTATCGTCATTATCACCCTCTACCTATCAG
GAGCAGCGGCACCTTTAATGACAGAACTTGCAGGTCAAATTGGTTATAATATACCGAAAGACGCTGTAGAAGTAACCTCT
CTAGCAGTTGGGACTCAGTGGTATACGTGGATTGTATATTACGGCCTTCATTGGTTCGGAGGTATTCTATAA

Upstream 100 bases:

>100_bases
TACCAGTTGTCATTGGAAGATCATTTTTAACAGGCCTAAAAAAACAAGAAACAATCGATGAAATACTCGCGATACTTCAA
GATTAAAGGGAGGGCACAAA

Downstream 100 bases:

>100_bases
TTGCAATTTAATGAAACAAGCATTAGTTTGCGCTAATGCTTGTTTTATTTGGACCAATGATTTTTAGCTAGTAGACAACA
CATTGACAGTTCTATATAAT

Product: PTS system, Galactitol-specific IIC component

Products: NA

Alternate protein names: Putative PTS system EIIC component [H]

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MDIILDFFKYIIGLGVTVMMPIIITILGVIFRKKISVAFKAGLTVGVGFVGLGVITSLMLTTITPVTKALVENYNFKLTA
TDIGWGVGSSLAWGTEVVPFVFVAIIATNILMIAFKWTKTMDVDIWNYWQPLFIASALYLTTGSMIIAILSSIINMAIIF
KIADWTQKDVENVLGLEGISLPQIQTTGWALVGYPMNWLLGKIPGVRKINWSTEKVQSRLGIFGEPMLMGLIIGGGLAAI
AQMPLSQVLQTGVTIAASLVLIPRMVSLLMDGLTVISEAAHEFMEKRFPGRELFIGLDSAVGIGHPFVLSLGLLMIPITL
ILAFILPGNKVLPLADLTALPFYMIFAIVPSKGNLFRGIFTGIVIVIITLYLSGAAAPLMTELAGQIGYNIPKDAVEVTS
LAVGTQWYTWIVYYGLHWFGGIL

Sequences:

>Translated_423_residues
MDIILDFFKYIIGLGVTVMMPIIITILGVIFRKKISVAFKAGLTVGVGFVGLGVITSLMLTTITPVTKALVENYNFKLTA
TDIGWGVGSSLAWGTEVVPFVFVAIIATNILMIAFKWTKTMDVDIWNYWQPLFIASALYLTTGSMIIAILSSIINMAIIF
KIADWTQKDVENVLGLEGISLPQIQTTGWALVGYPMNWLLGKIPGVRKINWSTEKVQSRLGIFGEPMLMGLIIGGGLAAI
AQMPLSQVLQTGVTIAASLVLIPRMVSLLMDGLTVISEAAHEFMEKRFPGRELFIGLDSAVGIGHPFVLSLGLLMIPITL
ILAFILPGNKVLPLADLTALPFYMIFAIVPSKGNLFRGIFTGIVIVIITLYLSGAAAPLMTELAGQIGYNIPKDAVEVTS
LAVGTQWYTWIVYYGLHWFGGIL
>Mature_423_residues
MDIILDFFKYIIGLGVTVMMPIIITILGVIFRKKISVAFKAGLTVGVGFVGLGVITSLMLTTITPVTKALVENYNFKLTA
TDIGWGVGSSLAWGTEVVPFVFVAIIATNILMIAFKWTKTMDVDIWNYWQPLFIASALYLTTGSMIIAILSSIINMAIIF
KIADWTQKDVENVLGLEGISLPQIQTTGWALVGYPMNWLLGKIPGVRKINWSTEKVQSRLGIFGEPMLMGLIIGGGLAAI
AQMPLSQVLQTGVTIAASLVLIPRMVSLLMDGLTVISEAAHEFMEKRFPGRELFIGLDSAVGIGHPFVLSLGLLMIPITL
ILAFILPGNKVLPLADLTALPFYMIFAIVPSKGNLFRGIFTGIVIVIITLYLSGAAAPLMTELAGQIGYNIPKDAVEVTS
LAVGTQWYTWIVYYGLHWFGGIL

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane [H]

COG id: COG3775

COG function: function code G; Phosphotransferase system, galactitol-specific IIC component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIC type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1790758, Length=404, Percent_Identity=39.3564356435644, Blast_Score=285, Evalue=3e-78,
Organism=Escherichia coli, GI1788408, Length=407, Percent_Identity=36.3636363636364, Blast_Score=283, Evalue=1e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013853
- InterPro:   IPR013014
- InterPro:   IPR004703 [H]

Pfam domain/function: PF03611 EIIC-GAT [H]

EC number: NA

Molecular weight: Translated: 45922; Mature: 45922

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: PS00107 PROTEIN_KINASE_ATP ; PS51104 PTS_EIIC_TYPE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIILDFFKYIIGLGVTVMMPIIITILGVIFRKKISVAFKAGLTVGVGFVGLGVITSLML
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
TTITPVTKALVENYNFKLTATDIGWGVGSSLAWGTEVVPFVFVAIIATNILMIAFKWTKT
HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCE
MDVDIWNYWQPLFIASALYLTTGSMIIAILSSIINMAIIFKIADWTQKDVENVLGLEGIS
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCC
LPQIQTTGWALVGYPMNWLLGKIPGVRKINWSTEKVQSRLGIFGEPMLMGLIIGGGLAAI
CCCEECCCEEEECCCHHHHHHCCCCCEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AQMPLSQVLQTGVTIAASLVLIPRMVSLLMDGLTVISEAAHEFMEKRFPGRELFIGLDSA
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC
VGIGHPFVLSLGLLMIPITLILAFILPGNKVLPLADLTALPFYMIFAIVPSKGNLFRGIF
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHCCCCCCHHHHHH
TGIVIVIITLYLSGAAAPLMTELAGQIGYNIPKDAVEVTSLAVGTQWYTWIVYYGLHWFG
HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHC
GIL
CCC
>Mature Secondary Structure
MDIILDFFKYIIGLGVTVMMPIIITILGVIFRKKISVAFKAGLTVGVGFVGLGVITSLML
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
TTITPVTKALVENYNFKLTATDIGWGVGSSLAWGTEVVPFVFVAIIATNILMIAFKWTKT
HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCE
MDVDIWNYWQPLFIASALYLTTGSMIIAILSSIINMAIIFKIADWTQKDVENVLGLEGIS
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCC
LPQIQTTGWALVGYPMNWLLGKIPGVRKINWSTEKVQSRLGIFGEPMLMGLIIGGGLAAI
CCCEECCCEEEECCCHHHHHHCCCCCEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AQMPLSQVLQTGVTIAASLVLIPRMVSLLMDGLTVISEAAHEFMEKRFPGRELFIGLDSA
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC
VGIGHPFVLSLGLLMIPITLILAFILPGNKVLPLADLTALPFYMIFAIVPSKGNLFRGIF
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHCCCCCCHHHHHH
TGIVIVIITLYLSGAAAPLMTELAGQIGYNIPKDAVEVTSLAVGTQWYTWIVYYGLHWFG
HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHC
GIL
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]