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The map label for this gene is gatB [C]

Identifier: 226223132

GI number: 226223132

Start: 538354

End: 538647

Strand: Direct

Name: gatB [C]

Synonym: Lm4b_00529

Alternate gene names: 226223132

Gene position: 538354-538647 (Clockwise)

Preceding gene: 226223131

Following gene: 226223133

Centisome position: 18.48

GC content: 36.05

Gene sequence:

>294_bases
ATGAAAAAGAAGAAAATTTATGTTTGTTGTGGGACTGGAATTGCAACTTCCACTGTTATTTCCAAAAAAGTGCGTGCGGT
ACTAGACGAAAAGCGCATTCCATATGAAATTAGTCAATGTACGGTTCAAGAAGTAGCGTCAAAAGTAAGCACATCTAAGC
CAGACATTATTGTTAGTTCAACAACAGTTACAGGTGATGTTGGTGATGTACCAGTTGTCATTGGAAGATCATTTTTAACA
GGCCTAAAAAAACAAGAAACAATCGATGAAATACTCGCGATACTTCAAGATTAA

Upstream 100 bases:

>100_bases
TTCACTTGCTGAAGGACCAGAAGTTTTTGAGCGAATCTATGAAAGAAATGAATTTTTCGGGAAAGTATTATTTTTCCCAG
AATAATAGGGGGATTTTAGG

Downstream 100 bases:

>100_bases
AGGGAGGGCACAAAATGGATATTATTCTAGATTTCTTTAAATATATTATCGGGCTTGGTGTAACAGTTATGATGCCGATT
ATCATTACCATTCTAGGTGT

Product: PTS system, Galactitol-specific IIB component

Products: protein histidine; sugar phosphate

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MKKKKIYVCCGTGIATSTVISKKVRAVLDEKRIPYEISQCTVQEVASKVSTSKPDIIVSSTTVTGDVGDVPVVIGRSFLT
GLKKQETIDEILAILQD

Sequences:

>Translated_97_residues
MKKKKIYVCCGTGIATSTVISKKVRAVLDEKRIPYEISQCTVQEVASKVSTSKPDIIVSSTTVTGDVGDVPVVIGRSFLT
GLKKQETIDEILAILQD
>Mature_97_residues
MKKKKIYVCCGTGIATSTVISKKVRAVLDEKRIPYEISQCTVQEVASKVSTSKPDIIVSSTTVTGDVGDVPVVIGRSFLT
GLKKQETIDEILAILQD

Specific function: This Is A Component Of The Phosphoenolpyruvate-Dependent Sugar Phosphotransferase System (Pts), A Major Carbohydrate Active -Transport System. The IIcd Domains Contain The Sugar Binding Site And The Transmembrane Channel; The IIa Domain Contains The Prim

COG id: COG3414

COG function: function code G; Phosphotransferase system, galactitol-specific IIB component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788409, Length=94, Percent_Identity=32.9787234042553, Blast_Score=61, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.1.69

Molecular weight: Translated: 10471; Mature: 10471

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: PS51099 PTS_EIIB_TYPE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKKIYVCCGTGIATSTVISKKVRAVLDEKRIPYEISQCTVQEVASKVSTSKPDIIVSS
CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEC
TTVTGDVGDVPVVIGRSFLTGLKKQETIDEILAILQD
CEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKKKKIYVCCGTGIATSTVISKKVRAVLDEKRIPYEISQCTVQEVASKVSTSKPDIIVSS
CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEC
TTVTGDVGDVPVVIGRSFLTGLKKQETIDEILAILQD
CEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: protein N(pi)-phosphohistidine; sugar

Specific reaction: protein N(pi)-phosphohistidine + sugar = protein histidine + sugar phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA