Click here to switch to the map view.

The map label for this gene is ywnA [H]

Identifier: 226223067

GI number: 226223067

Start: 474933

End: 475418

Strand: Reverse

Name: ywnA [H]

Synonym: Lm4b_00463

Alternate gene names: 226223067

Gene position: 475418-474933 (Counterclockwise)

Preceding gene: 226223070

Following gene: 226223056

Centisome position: 16.32

GC content: 31.89

Gene sequence:

>486_bases
TTGAAAGGATTGAAAAAAATGAAATACTCTATCCAATTTAGTGATGCTATCCACATTTTGGCTTATATAGAAATTTTTAA
AAATACGAATTTGTTATCGAGTGAAATTATTGCTGGTAGCGTAAAAACAAATCCCGCTAACATTAGAAAAATCATGAGTA
ATTTGAAAAAGTCCAATTTAATTACTACGCAAACTGGCAAAGCAAATCCGATTCTTGCTAGACCACCAGAAGAAATTTCA
CTGCTTGATGTTTATAAGAGTATAGAAGGCAATACGAATTTAATTCACGTTGATCCAAAAACCAATCCAGACTGCATTGT
CGGAGCCAATATCCAACAAGTTCTTGCGAGTAAATACGATTTGCTCCAACAAAAAATAGAATTTGAAATGGAAAAAATTA
AATTAGATAGTATTGTTCGTGATATTTCTGTACTTGAAAGCAAAGACCGGCCGCAGAATATGGAAATTATCGAAAAGTAT
TTGTAA

Upstream 100 bases:

>100_bases
ATTTAAACCACTCCTTCAAATTTTTTTAATATTAAAGCTGTACATTTATAATTTACACCTTTATAATAAACATTATGATA
AGATAAGTCAAGAAGAAAAT

Downstream 100 bases:

>100_bases
AAATAAGTCCAAAGAAAAAAGAACTGATCCGTTTTCAGCGAATCAGTTCTTTTTTCATAAATTTAAAGTTGTAGCTTTTT
TCTTCCCCAATATTTAGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MKGLKKMKYSIQFSDAIHILAYIEIFKNTNLLSSEIIAGSVKTNPANIRKIMSNLKKSNLITTQTGKANPILARPPEEIS
LLDVYKSIEGNTNLIHVDPKTNPDCIVGANIQQVLASKYDLLQQKIEFEMEKIKLDSIVRDISVLESKDRPQNMEIIEKY
L

Sequences:

>Translated_161_residues
MKGLKKMKYSIQFSDAIHILAYIEIFKNTNLLSSEIIAGSVKTNPANIRKIMSNLKKSNLITTQTGKANPILARPPEEIS
LLDVYKSIEGNTNLIHVDPKTNPDCIVGANIQQVLASKYDLLQQKIEFEMEKIKLDSIVRDISVLESKDRPQNMEIIEKY
L
>Mature_161_residues
MKGLKKMKYSIQFSDAIHILAYIEIFKNTNLLSSEIIAGSVKTNPANIRKIMSNLKKSNLITTQTGKANPILARPPEEIS
LLDVYKSIEGNTNLIHVDPKTNPDCIVGANIQQVLASKYDLLQQKIEFEMEKIKLDSIVRDISVLESKDRPQNMEIIEKY
L

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 18216; Mature: 18216

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGLKKMKYSIQFSDAIHILAYIEIFKNTNLLSSEIIAGSVKTNPANIRKIMSNLKKSNL
CCCHHHHEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCE
ITTQTGKANPILARPPEEISLLDVYKSIEGNTNLIHVDPKTNPDCIVGANIQQVLASKYD
EEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCEEECCCHHHHHHHHHH
LLQQKIEFEMEKIKLDSIVRDISVLESKDRPQNMEIIEKYL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCC
>Mature Secondary Structure
MKGLKKMKYSIQFSDAIHILAYIEIFKNTNLLSSEIIAGSVKTNPANIRKIMSNLKKSNL
CCCHHHHEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCE
ITTQTGKANPILARPPEEISLLDVYKSIEGNTNLIHVDPKTNPDCIVGANIQQVLASKYD
EEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCEEECCCHHHHHHHHHH
LLQQKIEFEMEKIKLDSIVRDISVLESKDRPQNMEIIEKYL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9150240; 9384377 [H]