| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226223070
Identifier: 226223070
GI number: 226223070
Start: 477168
End: 478436
Strand: Reverse
Name: 226223070
Synonym: Lm4b_00466
Alternate gene names: NA
Gene position: 478436-477168 (Counterclockwise)
Preceding gene: 226223072
Following gene: 226223067
Centisome position: 16.43
GC content: 38.3
Gene sequence:
>1269_bases ATGGTAAAAATCACGAGTTATCCCGCTGAACCTTCTGATGTTAAACATTATATTTCTGGAGAAAAAATGAAAAATGACCA CCATTTGCATACGGTACTTAAGTTTGATAATCATTTAAATATAGACGTTCTAAAAAAAGCAGTGATGCAGTCTACTAAAA AACTTCCGCTATTACTTTGTCATTTTAAAGAAACGAAAAAAGGTGCTTTTTGGCAAGAAAGTGTTTTTTCTGCGGAGGAT TTGGTTTTCTTAGTGGAAACGCAAGCGCCAGAAACCGAAGTGGACCGAGCACTTGTAACGAAGCTTTCCACAGAAAATGG GCCGCAAATTTGCTTTACTGTTGTTCGGGCTGATACTTCTGATCAGCTTGTGGTTATTATGAATCATATGTTAGCAGATG GCGCTGGATTTAAGGAATATCTTTATTTATTGAGTGAGCTTTATTCTAATCTGCTTGAAAATCCGGATTATGCGGCGAAT TTGAGCTTAGGTTCCCGGAGTTTAAAGCAAATTTTTGATCAACTTTCGCGTAAAGATATAAAGTCCATTTTTACGGAAAA AACGAAGCAAAAAGCTGTCCATAACCCAACTTTCCCTCTTAAAGGTGACCCGAAAAATCCGAAAGTTATTTGGACTAAGC TACCAAAAGAGGATTTTTCGGAAATCATCCACTTTGCAAAAGAGCACGAGGCAACTGTGAATGATGTTCTGTTCGCCGCA ATGGCGCGCACTGTTCAGCAAACAACAGGGCAACAAGAAATGTCAATTGATTGCCCGGTGGATCTCCGTAAGTATTTGCC GAGTAAGACCAGTAGCGGAATTACCAATCTCACCGCCAATATTACATGCCAAATCAGCGCAAACGATGACCTAACGTCAT TTGAAAGCACACTCCAAGCCGTCAAAAATTCACTCAATCCACAAAAAAACAGCTTTGCACCTCTACGAATTTATTATTTA TTGGAACTGATTTTCAAGAAAAAGAACTACTCTGTTGCAAAAAAAGCTTCTGAAAAAATGTATTCTATTCCGAAAACAAG TTTTACGAATATAGGTATTATCGATGAGGAAAAACTCGTTTTTGAAGGTAGCACTTTAACAGATTGTTTTATTTGTGGTT CTTTAAAGTATGCGCCGTTTTTCCAAGTCGCTGCTACAACTTTCCGCGGCGAGCTGACACTGAGTACTAATTTGCATGGT ACTACGCAAGATCATGCTTGGCAGAAAGACTTTTTGGAGCAGATGATTTCAGAATTTCCTTCTAAATAA
Upstream 100 bases:
>100_bases CAGTATAACTTAAACTCACTTTGATCCGCAACTTGTTTCGCAGCACTGCTTTCAGGGAAACTATTAACAACTATTTAAAC CGAAGAAAGAAGGAAGTCCC
Downstream 100 bases:
>100_bases GAAAAAGCTATCCTCAGCAGGATGGCTTTTTCTTATTTCTGACTATCCAATAATTCGTAGCCTACTTTCAAGTTATTTAA GGCTGTTTGTAATTTATTCG
Product: module of peptide synthetase
Products: NA
Alternate protein names: Condensation Domain Protein; Alcohol Acetyltransferase; Protein Containing A NRPS Condensation Like Domain; Module Of Peptide Synthetase; Siderophore/Surfactin Synthetase Related Protein
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MVKITSYPAEPSDVKHYISGEKMKNDHHLHTVLKFDNHLNIDVLKKAVMQSTKKLPLLLCHFKETKKGAFWQESVFSAED LVFLVETQAPETEVDRALVTKLSTENGPQICFTVVRADTSDQLVVIMNHMLADGAGFKEYLYLLSELYSNLLENPDYAAN LSLGSRSLKQIFDQLSRKDIKSIFTEKTKQKAVHNPTFPLKGDPKNPKVIWTKLPKEDFSEIIHFAKEHEATVNDVLFAA MARTVQQTTGQQEMSIDCPVDLRKYLPSKTSSGITNLTANITCQISANDDLTSFESTLQAVKNSLNPQKNSFAPLRIYYL LELIFKKKNYSVAKKASEKMYSIPKTSFTNIGIIDEEKLVFEGSTLTDCFICGSLKYAPFFQVAATTFRGELTLSTNLHG TTQDHAWQKDFLEQMISEFPSK
Sequences:
>Translated_422_residues MVKITSYPAEPSDVKHYISGEKMKNDHHLHTVLKFDNHLNIDVLKKAVMQSTKKLPLLLCHFKETKKGAFWQESVFSAED LVFLVETQAPETEVDRALVTKLSTENGPQICFTVVRADTSDQLVVIMNHMLADGAGFKEYLYLLSELYSNLLENPDYAAN LSLGSRSLKQIFDQLSRKDIKSIFTEKTKQKAVHNPTFPLKGDPKNPKVIWTKLPKEDFSEIIHFAKEHEATVNDVLFAA MARTVQQTTGQQEMSIDCPVDLRKYLPSKTSSGITNLTANITCQISANDDLTSFESTLQAVKNSLNPQKNSFAPLRIYYL LELIFKKKNYSVAKKASEKMYSIPKTSFTNIGIIDEEKLVFEGSTLTDCFICGSLKYAPFFQVAATTFRGELTLSTNLHG TTQDHAWQKDFLEQMISEFPSK >Mature_422_residues MVKITSYPAEPSDVKHYISGEKMKNDHHLHTVLKFDNHLNIDVLKKAVMQSTKKLPLLLCHFKETKKGAFWQESVFSAED LVFLVETQAPETEVDRALVTKLSTENGPQICFTVVRADTSDQLVVIMNHMLADGAGFKEYLYLLSELYSNLLENPDYAAN LSLGSRSLKQIFDQLSRKDIKSIFTEKTKQKAVHNPTFPLKGDPKNPKVIWTKLPKEDFSEIIHFAKEHEATVNDVLFAA MARTVQQTTGQQEMSIDCPVDLRKYLPSKTSSGITNLTANITCQISANDDLTSFESTLQAVKNSLNPQKNSFAPLRIYYL LELIFKKKNYSVAKKASEKMYSIPKTSFTNIGIIDEEKLVFEGSTLTDCFICGSLKYAPFFQVAATTFRGELTLSTNLHG TTQDHAWQKDFLEQMISEFPSK
Specific function: Unknown
COG id: COG4908
COG function: function code R; Uncharacterized protein containing a NRPS condensation (elongation) domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47692; Mature: 47692
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKITSYPAEPSDVKHYISGEKMKNDHHLHTVLKFDNHLNIDVLKKAVMQSTKKLPLLLC CEEECCCCCCHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEE HFKETKKGAFWQESVFSAEDLVFLVETQAPETEVDRALVTKLSTENGPQICFTVVRADTS ECHHCCCCCCHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCC DQLVVIMNHMLADGAGFKEYLYLLSELYSNLLENPDYAANLSLGSRSLKQIFDQLSRKDI CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHH KSIFTEKTKQKAVHNPTFPLKGDPKNPKVIWTKLPKEDFSEIIHFAKEHEATVNDVLFAA HHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHH MARTVQQTTGQQEMSIDCPVDLRKYLPSKTSSGITNLTANITCQISANDDLTSFESTLQA HHHHHHHHCCCCCEEECCCHHHHHHCCCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHH VKNSLNPQKNSFAPLRIYYLLELIFKKKNYSVAKKASEKMYSIPKTSFTNIGIIDEEKLV HHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEECCCCEE FEGSTLTDCFICGSLKYAPFFQVAATTFRGELTLSTNLHGTTQDHAWQKDFLEQMISEFP ECCCCCCHHEEECCCCCCCHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCC SK CC >Mature Secondary Structure MVKITSYPAEPSDVKHYISGEKMKNDHHLHTVLKFDNHLNIDVLKKAVMQSTKKLPLLLC CEEECCCCCCHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEE HFKETKKGAFWQESVFSAEDLVFLVETQAPETEVDRALVTKLSTENGPQICFTVVRADTS ECHHCCCCCCHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCC DQLVVIMNHMLADGAGFKEYLYLLSELYSNLLENPDYAANLSLGSRSLKQIFDQLSRKDI CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHH KSIFTEKTKQKAVHNPTFPLKGDPKNPKVIWTKLPKEDFSEIIHFAKEHEATVNDVLFAA HHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHH MARTVQQTTGQQEMSIDCPVDLRKYLPSKTSSGITNLTANITCQISANDDLTSFESTLQA HHHHHHHHCCCCCEEECCCHHHHHHCCCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHH VKNSLNPQKNSFAPLRIYYLLELIFKKKNYSVAKKASEKMYSIPKTSFTNIGIIDEEKLV HHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEECCCCEE FEGSTLTDCFICGSLKYAPFFQVAATTFRGELTLSTNLHGTTQDHAWQKDFLEQMISEFP ECCCCCCHHEEECCCCCCCHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCC SK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA