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The map label for this gene is yacP [H]

Identifier: 226222871

GI number: 226222871

Start: 258670

End: 259182

Strand: Direct

Name: yacP [H]

Synonym: Lm4b_00262

Alternate gene names: 226222871

Gene position: 258670-259182 (Clockwise)

Preceding gene: 226222870

Following gene: 226222872

Centisome position: 8.88

GC content: 40.94

Gene sequence:

>513_bases
ATGGAACAAATTCTGCTTGTTGACGGATATAATGTGATTGGGGCATGGCCAGAACTTAGTTTCTTAAAAGATCGTGATTT
GGAAGCGGCAAGAGATAAGCTTGTTGAATGGATGGCGGAATATCAAAGTTATACAGGATATCGGGTTGTGGTCGTTTTTG
ATGCACAGTTTGTCCGGGGCGTGAAGCGTAAAAGTAAGAAGTATCAGGTAGAAGTCGTTTTTACGCATGAGGATGAAACG
GCAGATGAGTACATCGAACAAAAAGCGATTGAATGGAAAAACGTGCGGACGCAAATTATGGTAGCAACATCTGACTATAC
AGAACAGTGGGCTATTTTTGGACAAGGTGCACTACGAATTTCATCCCGAGAGTTACTTTTTGAAATTCAAGAAATGAGTA
AACAAATCGGACAGAAAATCAAGCGAATTCAGGAAGAAATGCCGAAATCAAACCTTAATCTGGATTCTGATGTCATTTCA
CAGCTCGAAAAGTGGAGAAGAGGCGAGGAGTAA

Upstream 100 bases:

>100_bases
TACCAATGCGTGGAAAAGTTACATCACTTAATGCATCTGTTGCAGCTAGTTTGTTACTTTATGAAGTTTATCGGAAACGT
TTCCCTCTGGAGAAATAAAG

Downstream 100 bases:

>100_bases
GGGATTGACGGTATGTTTTTGACTATGTATAATGGAGCAACCATAGAAGAAATCCTGTCGTAAAGGAGCCGATTAGCCTA
GTGGATAATTCAGTGAACCA

Product: Yacp protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MEQILLVDGYNVIGAWPELSFLKDRDLEAARDKLVEWMAEYQSYTGYRVVVVFDAQFVRGVKRKSKKYQVEVVFTHEDET
ADEYIEQKAIEWKNVRTQIMVATSDYTEQWAIFGQGALRISSRELLFEIQEMSKQIGQKIKRIQEEMPKSNLNLDSDVIS
QLEKWRRGEE

Sequences:

>Translated_170_residues
MEQILLVDGYNVIGAWPELSFLKDRDLEAARDKLVEWMAEYQSYTGYRVVVVFDAQFVRGVKRKSKKYQVEVVFTHEDET
ADEYIEQKAIEWKNVRTQIMVATSDYTEQWAIFGQGALRISSRELLFEIQEMSKQIGQKIKRIQEEMPKSNLNLDSDVIS
QLEKWRRGEE
>Mature_170_residues
MEQILLVDGYNVIGAWPELSFLKDRDLEAARDKLVEWMAEYQSYTGYRVVVVFDAQFVRGVKRKSKKYQVEVVFTHEDET
ADEYIEQKAIEWKNVRTQIMVATSDYTEQWAIFGQGALRISSRELLFEIQEMSKQIGQKIKRIQEEMPKSNLNLDSDVIS
QLEKWRRGEE

Specific function: Unknown

COG id: COG3688

COG function: function code R; Predicted RNA-binding protein containing a PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010298 [H]

Pfam domain/function: PF05991 DUF901 [H]

EC number: NA

Molecular weight: Translated: 20049; Mature: 20049

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQILLVDGYNVIGAWPELSFLKDRDLEAARDKLVEWMAEYQSYTGYRVVVVFDAQFVRG
CCEEEEEECCCEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHH
VKRKSKKYQVEVVFTHEDETADEYIEQKAIEWKNVRTQIMVATSDYTEQWAIFGQGALRI
HHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHEECCCEEEE
SSRELLFEIQEMSKQIGQKIKRIQEEMPKSNLNLDSDVISQLEKWRRGEE
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEQILLVDGYNVIGAWPELSFLKDRDLEAARDKLVEWMAEYQSYTGYRVVVVFDAQFVRG
CCEEEEEECCCEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHH
VKRKSKKYQVEVVFTHEDETADEYIEQKAIEWKNVRTQIMVATSDYTEQWAIFGQGALRI
HHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHEECCCEEEE
SSRELLFEIQEMSKQIGQKIKRIQEEMPKSNLNLDSDVISQLEKWRRGEE
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]