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The map label for this gene is sufD [C]

Identifier: 225852444

GI number: 225852444

Start: 927702

End: 928979

Strand: Direct

Name: sufD [C]

Synonym: BMEA_A0971

Alternate gene names: 225852444

Gene position: 927702-928979 (Clockwise)

Preceding gene: 225852443

Following gene: 225852445

Centisome position: 43.64

GC content: 59.08

Gene sequence:

>1278_bases
ATGAATATCCAGGCCACTTCGGCACCCAAGCCGCGCACCCCGGCTGAAAGCGTGCTGATCGACAGTTTTGCCGAGCGCAT
GGGCGATCTGCCCGGCAATGGCGATGTCGTGATCGCACGCGACACGGCCCTTGAAGCCCTCAAGGTTCAGGGGCTTCCCT
CGCGCCGCATCGAAAGCTGGCATTACACCGATTTCCGCACGTTGCTGAAGGGCGTTGCGGCATTCGACACATCTGCCGGA
ACACAGGCTCTGCCGGCGCTGATTGCCGGTTCGTCCATCATTGCCGCCAGCAATGGTGTCGCGCTTGCCGCCAAGGCCCC
CAAAGGCGTTTTGCTGACGCCGGTTCGTGAGGCGCTTGCCGATGGTTCGCTTGTCTCGCAGCTTAGGTCGCGTGGCTTCG
ACGATACGATCGGCCAGATCAACGCTGCCTATGTCAGCGACGGCTGGATGGTTTCGATTGCCGATGACACGGAACTGGAA
GAGCCGCTCGAAATACAGAACATCCAGAATGCCGGGCAGGGGCATACGCGGTTTCCGGTTCGCATCGGCGCCAACGTCAA
GGGCACGATCATCGAACGCCAGAATGGCGGTGAGGGGGATGCCTTCTCCACATCCGTCAACCATGTGACGGTCGGCGATG
GTGCGCAGATCATCTGGGTGATTCTGCGCGATTTCGGCCAGGCAACACAGCTCTCGCAGTTCAATGTGACAATCGGCAAG
GGGTCCAGGCTGACGCTTTACATCGTCAATGCGGGCGGCAAGCTGGTTCGTCAGGAAGTGCATGTGAATGTCGAGGGCGA
GGATTCCGATTTTGAGCTTCGCGGCCTCAATCTTCTGGCCGATGACAGCCATACGGACGTCACCATGACCGTGGGCCATT
TGGTGGAGAATACCCGCTCCACCGAGATTGTGCGCAATGTGGTGAAAGACCGTGCACGCGGCGTTTTCCAGGGCATGATC
CGTGTCGCCCAGATCGCCCAGAAGACTGATGCCCGCATGGCCTGCAACACACTTCTGCTTTCGGATGAAGGCGAGTTTGA
TGCCAAGCCTGAACTTGAAATCTTCGCGGACGATGTGGCCTGCGGCCATGGCGCGACGGTTGCGGAACTGTCCAGGGACT
ATCTCTTTTATCTGATGGCCCGTGGCATCCCCGAAAATGAAGCGCGCGGCCTGCTGATCAAGGCGTTCATCGCCGAGATC
ATCGAGGAGCTGGAAGACGAAACGCTGGTTGAAGCACTCGAAGGGGTTCTTTCCAACTGGCTCGCCGTTCATGCTTGA

Upstream 100 bases:

>100_bases
GGGCAGGTCATCAAGTCCGGCGACAAGAGCCTCGCGCTGCATCTGGAAGAAAATGGTTATGCCGACGTAATCGGCGAAGC
CGCCTGAGGAGGGTTGGATC

Downstream 100 bases:

>100_bases
GTGAATTGGGCCTGATTGAACAGGACGGGGCGGGAGTTTCCCGCTTCCTCCTTTCCTGCCGGGAAGGCAGAAGGAACGAT
CATGGATCAGAAGAATCCGC

Product: FeS assembly protein SufD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MNIQATSAPKPRTPAESVLIDSFAERMGDLPGNGDVVIARDTALEALKVQGLPSRRIESWHYTDFRTLLKGVAAFDTSAG
TQALPALIAGSSIIAASNGVALAAKAPKGVLLTPVREALADGSLVSQLRSRGFDDTIGQINAAYVSDGWMVSIADDTELE
EPLEIQNIQNAGQGHTRFPVRIGANVKGTIIERQNGGEGDAFSTSVNHVTVGDGAQIIWVILRDFGQATQLSQFNVTIGK
GSRLTLYIVNAGGKLVRQEVHVNVEGEDSDFELRGLNLLADDSHTDVTMTVGHLVENTRSTEIVRNVVKDRARGVFQGMI
RVAQIAQKTDARMACNTLLLSDEGEFDAKPELEIFADDVACGHGATVAELSRDYLFYLMARGIPENEARGLLIKAFIAEI
IEELEDETLVEALEGVLSNWLAVHA

Sequences:

>Translated_425_residues
MNIQATSAPKPRTPAESVLIDSFAERMGDLPGNGDVVIARDTALEALKVQGLPSRRIESWHYTDFRTLLKGVAAFDTSAG
TQALPALIAGSSIIAASNGVALAAKAPKGVLLTPVREALADGSLVSQLRSRGFDDTIGQINAAYVSDGWMVSIADDTELE
EPLEIQNIQNAGQGHTRFPVRIGANVKGTIIERQNGGEGDAFSTSVNHVTVGDGAQIIWVILRDFGQATQLSQFNVTIGK
GSRLTLYIVNAGGKLVRQEVHVNVEGEDSDFELRGLNLLADDSHTDVTMTVGHLVENTRSTEIVRNVVKDRARGVFQGMI
RVAQIAQKTDARMACNTLLLSDEGEFDAKPELEIFADDVACGHGATVAELSRDYLFYLMARGIPENEARGLLIKAFIAEI
IEELEDETLVEALEGVLSNWLAVHA
>Mature_425_residues
MNIQATSAPKPRTPAESVLIDSFAERMGDLPGNGDVVIARDTALEALKVQGLPSRRIESWHYTDFRTLLKGVAAFDTSAG
TQALPALIAGSSIIAASNGVALAAKAPKGVLLTPVREALADGSLVSQLRSRGFDDTIGQINAAYVSDGWMVSIADDTELE
EPLEIQNIQNAGQGHTRFPVRIGANVKGTIIERQNGGEGDAFSTSVNHVTVGDGAQIIWVILRDFGQATQLSQFNVTIGK
GSRLTLYIVNAGGKLVRQEVHVNVEGEDSDFELRGLNLLADDSHTDVTMTVGHLVENTRSTEIVRNVVKDRARGVFQGMI
RVAQIAQKTDARMACNTLLLSDEGEFDAKPELEIFADDVACGHGATVAELSRDYLFYLMARGIPENEARGLLIKAFIAEI
IEELEDETLVEALEGVLSNWLAVHA

Specific function: FhuF function [C]

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=402, Percent_Identity=26.3681592039801, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI87081955, Length=326, Percent_Identity=20.5521472392638, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 45715; Mature: 45715

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIQATSAPKPRTPAESVLIDSFAERMGDLPGNGDVVIARDTALEALKVQGLPSRRIESW
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHCCCCCCHHCCCC
HYTDFRTLLKGVAAFDTSAGTQALPALIAGSSIIAASNGVALAAKAPKGVLLTPVREALA
CCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEECCCEEEEECCCCCEEEHHHHHHHC
DGSLVSQLRSRGFDDTIGQINAAYVSDGWMVSIADDTELEEPLEIQNIQNAGQGHTRFPV
CCHHHHHHHHCCCCCHHHCEEEEEECCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCEE
RIGANVKGTIIERQNGGEGDAFSTSVNHVTVGDGAQIIWVILRDFGQATQLSQFNVTIGK
EECCCCEEEEEECCCCCCCCCEECCCCEEEECCCCHHHHHHHHHCCCCCCCEEEEEEECC
GSRLTLYIVNAGGKLVRQEVHVNVEGEDSDFELRGLNLLADDSHTDVTMTVGHLVENTRS
CCEEEEEEECCCCCEEEEEEEEEECCCCCCEEEECCEEEECCCCCCEEEEHHHHHHCCCH
TEIVRNVVKDRARGVFQGMIRVAQIAQKTDARMACNTLLLSDEGEFDAKPELEIFADDVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCEEEEECCCC
CGHGATVAELSRDYLFYLMARGIPENEARGLLIKAFIAEIIEELEDETLVEALEGVLSNW
CCCCCHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
LAVHA
HEECC
>Mature Secondary Structure
MNIQATSAPKPRTPAESVLIDSFAERMGDLPGNGDVVIARDTALEALKVQGLPSRRIESW
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHCCCCCCHHCCCC
HYTDFRTLLKGVAAFDTSAGTQALPALIAGSSIIAASNGVALAAKAPKGVLLTPVREALA
CCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEECCCEEEEECCCCCEEEHHHHHHHC
DGSLVSQLRSRGFDDTIGQINAAYVSDGWMVSIADDTELEEPLEIQNIQNAGQGHTRFPV
CCHHHHHHHHCCCCCHHHCEEEEEECCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCEE
RIGANVKGTIIERQNGGEGDAFSTSVNHVTVGDGAQIIWVILRDFGQATQLSQFNVTIGK
EECCCCEEEEEECCCCCCCCCEECCCCEEEECCCCHHHHHHHHHCCCCCCCEEEEEEECC
GSRLTLYIVNAGGKLVRQEVHVNVEGEDSDFELRGLNLLADDSHTDVTMTVGHLVENTRS
CCEEEEEEECCCCCEEEEEEEEEECCCCCCEEEECCEEEECCCCCCEEEEHHHHHHCCCH
TEIVRNVVKDRARGVFQGMIRVAQIAQKTDARMACNTLLLSDEGEFDAKPELEIFADDVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCEEEEECCCC
CGHGATVAELSRDYLFYLMARGIPENEARGLLIKAFIAEIIEELEDETLVEALEGVLSNW
CCCCCHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
LAVHA
HEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]