Click here to switch to the map view.

The map label for this gene is 225686374

Identifier: 225686374

GI number: 225686374

Start: 553724

End: 555115

Strand: Direct

Name: 225686374

Synonym: BMEA_B0563

Alternate gene names: NA

Gene position: 553724-555115 (Clockwise)

Preceding gene: 225686372

Following gene: 225686375

Centisome position: 46.71

GC content: 55.17

Gene sequence:

>1392_bases
GTGGAATTCACGCTTATGCCCATGCTTATTACCAATCCACATCTGCCGGACAATCCGATCGTTTTTGCCAACCCCGCCTT
TCTGAAATTGACGGGTTACGAGGCTGACGAGGTTATGGGGCGCAATTGCCGCTTTCTTCAGGGGCACGGAACCGATCCTG
CGCATGTTCGCGCCATCAAATCTGCAATTGCGGCTGAAAAACCCATTGATATCGATATCATCAATTACAAGAAGTCCGGC
GAAGCCTTCTGGAACCGCCTGCATATTTCGCCGGTGCACAATGCAAATGGGCGGCTCCAGCATTTTGTTTCATCCCAGCT
CGACGTGACATTGGAACTTAGCAGGCTGGTGGAACTGGAAAAAGAGCGCAAGACGCTTTCCATCGAAACGGCGCGCAGCA
AGGACCAGCTTGATTATATCGTCGAGGTCGCGAATATCGGCTTCTGGACGCGGGAATTCTATTCCGGAAAGATGACATGT
TCGGCCGAATGCCGACGGATTTATGGATTTACGCCGGATGAGCCGGTGCATTTCGATACGATCCTCGATCTGGTCGTTCT
GGAAGACCGGATGACTGTCGTGCAAAAGGCCCATCAGGCGGTTACGGGCGAACCCTATAGTATCGAATATCGGATCGTCA
CGCGGCTGGGGGAAACGCGCTGGCTGGAAACCCGCGCCAAGGCGCTGACGGGTGAAAATCCGCTGGTTCTGGGTATCGTG
CAGGATGTAACCGAGCGCAAGAAAGCAGAAGCGAACAAGGCTCTGGTTTCCCGCGAAATTGCGCATCGCTTCAAGAACTC
CATGGCGATGGTGCAATCAATCGCCAACCAGACCCTGCGCAACACCTATGATCCAGAACAGGCAAACCGGCTGTTCAGCG
AACGGTTGCGCGCGCTGTCGCAAGCCCATGACATGCTGCTAAAGGAAAACTGGGCGGGCGCCACCATACAGCAAATCTGC
GCGACCGCGCTTGCGCCATTCAACAGCACTTTCGCCAATCGCATCCATATGAGCGGGCCGCACCTGCTCGTCAGCGACCG
TGTGACGGTAGCGCTTTCTCTGGCGTTTTATGAACTGGCCACCAATGCGGTGAAATATGGCGCTCTCTCGAACGAGAAAG
GCGTGATCAATATCACATGGGCCATTATGGAGGATAAAGGCGAAAAGAAATTTCACATGCGCTGGGCGGAAAGCCGGGGA
CCGGAGGTTATGCAACCGGCCCGGCGAGGCTTCGGGCAGAGACTGCTGCATTCTGTGCTGGCAGAGGAACTGAAGGCGAA
ATGCGATGTGGAATTCGCCGCATCCGGGCTTTTGATAGACGTTCTGGCCCCAATCACGCCGGAAGTCTTTCCGGGCATGG
GCCACAATGTGCCGGAACAGCGCATCGCGTGA

Upstream 100 bases:

>100_bases
TTTGAGTAAGTTTGAGGGCTGTATGGCAATAGATTTAAGGCCATTCATACCATTTGGGAGAGGTGCGCTATCGCAGGCAA
CCGATCCCTTTCGGGCCGCG

Downstream 100 bases:

>100_bases
CCCATATGGCAATGTCTCAACTTATATGTCCTTATCCAATCGTAGTTGGAAAATGCGACAAAACAAATAGTTAGTGCGGT
TCCGACGATTCTGTTAAAAT

Product: PAS domain S-box-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MEFTLMPMLITNPHLPDNPIVFANPAFLKLTGYEADEVMGRNCRFLQGHGTDPAHVRAIKSAIAAEKPIDIDIINYKKSG
EAFWNRLHISPVHNANGRLQHFVSSQLDVTLELSRLVELEKERKTLSIETARSKDQLDYIVEVANIGFWTREFYSGKMTC
SAECRRIYGFTPDEPVHFDTILDLVVLEDRMTVVQKAHQAVTGEPYSIEYRIVTRLGETRWLETRAKALTGENPLVLGIV
QDVTERKKAEANKALVSREIAHRFKNSMAMVQSIANQTLRNTYDPEQANRLFSERLRALSQAHDMLLKENWAGATIQQIC
ATALAPFNSTFANRIHMSGPHLLVSDRVTVALSLAFYELATNAVKYGALSNEKGVINITWAIMEDKGEKKFHMRWAESRG
PEVMQPARRGFGQRLLHSVLAEELKAKCDVEFAASGLLIDVLAPITPEVFPGMGHNVPEQRIA

Sequences:

>Translated_463_residues
MEFTLMPMLITNPHLPDNPIVFANPAFLKLTGYEADEVMGRNCRFLQGHGTDPAHVRAIKSAIAAEKPIDIDIINYKKSG
EAFWNRLHISPVHNANGRLQHFVSSQLDVTLELSRLVELEKERKTLSIETARSKDQLDYIVEVANIGFWTREFYSGKMTC
SAECRRIYGFTPDEPVHFDTILDLVVLEDRMTVVQKAHQAVTGEPYSIEYRIVTRLGETRWLETRAKALTGENPLVLGIV
QDVTERKKAEANKALVSREIAHRFKNSMAMVQSIANQTLRNTYDPEQANRLFSERLRALSQAHDMLLKENWAGATIQQIC
ATALAPFNSTFANRIHMSGPHLLVSDRVTVALSLAFYELATNAVKYGALSNEKGVINITWAIMEDKGEKKFHMRWAESRG
PEVMQPARRGFGQRLLHSVLAEELKAKCDVEFAASGLLIDVLAPITPEVFPGMGHNVPEQRIA
>Mature_463_residues
MEFTLMPMLITNPHLPDNPIVFANPAFLKLTGYEADEVMGRNCRFLQGHGTDPAHVRAIKSAIAAEKPIDIDIINYKKSG
EAFWNRLHISPVHNANGRLQHFVSSQLDVTLELSRLVELEKERKTLSIETARSKDQLDYIVEVANIGFWTREFYSGKMTC
SAECRRIYGFTPDEPVHFDTILDLVVLEDRMTVVQKAHQAVTGEPYSIEYRIVTRLGETRWLETRAKALTGENPLVLGIV
QDVTERKKAEANKALVSREIAHRFKNSMAMVQSIANQTLRNTYDPEQANRLFSERLRALSQAHDMLLKENWAGATIQQIC
ATALAPFNSTFANRIHMSGPHLLVSDRVTVALSLAFYELATNAVKYGALSNEKGVINITWAIMEDKGEKKFHMRWAESRG
PEVMQPARRGFGQRLLHSVLAEELKAKCDVEFAASGLLIDVLAPITPEVFPGMGHNVPEQRIA

Specific function: Photosensitive kinase that is involved in increased bacterial virulence upon exposure to light. Once ejected from an infected animal host, sunlight acts as an environmental signal that increases the virulence of the bacterium, preparing it for infection o

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Drosophila melanogaster, GI17136946, Length=105, Percent_Identity=31.4285714285714, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR013655
- InterPro:   IPR011102 [H]

Pfam domain/function: PF07536 HWE_HK; PF00989 PAS; PF08447 PAS_3 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 52105; Mature: 52105

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: PS50112 PAS ; PS50113 PAC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFTLMPMLITNPHLPDNPIVFANPAFLKLTGYEADEVMGRNCRFLQGHGTDPAHVRAIK
CCEEEEEHEEECCCCCCCCEEEECCCEEEEECCCHHHHCCCCCEEEECCCCCHHHHHHHH
SAIAAEKPIDIDIINYKKSGEAFWNRLHISPVHNANGRLQHFVSSQLDVTLELSRLVELE
HHHHCCCCCEEEEEECCCCCHHHHHEEECCCCCCCCCHHHHHHHCCCCEEEEHHHHHHHH
KERKTLSIETARSKDQLDYIVEVANIGFWTREFYSGKMTCSAECRRIYGFTPDEPVHFDT
HHCCEEEEEECCCHHHHHHHHHHHHCCHHHHHHHCCCCEECHHHHHHCCCCCCCCCHHHH
ILDLVVLEDRMTVVQKAHQAVTGEPYSIEYRIVTRLGETRWLETRAKALTGENPLVLGIV
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEHH
QDVTERKKAEANKALVSREIAHRFKNSMAMVQSIANQTLRNTYDPEQANRLFSERLRALS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
QAHDMLLKENWAGATIQQICATALAPFNSTFANRIHMSGPHLLVSDRVTVALSLAFYELA
HHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHEEECCCCEEEEECCHHHHHHHHHHHHH
TNAVKYGALSNEKGVINITWAIMEDKGEKKFHMRWAESRGPEVMQPARRGFGQRLLHSVL
HHHHHHCCCCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
AEELKAKCDVEFAASGLLIDVLAPITPEVFPGMGHNVPEQRIA
HHHHHHHCCHHHHCCCHHHHHHCCCCHHHCCCCCCCCCHHHCC
>Mature Secondary Structure
MEFTLMPMLITNPHLPDNPIVFANPAFLKLTGYEADEVMGRNCRFLQGHGTDPAHVRAIK
CCEEEEEHEEECCCCCCCCEEEECCCEEEEECCCHHHHCCCCCEEEECCCCCHHHHHHHH
SAIAAEKPIDIDIINYKKSGEAFWNRLHISPVHNANGRLQHFVSSQLDVTLELSRLVELE
HHHHCCCCCEEEEEECCCCCHHHHHEEECCCCCCCCCHHHHHHHCCCCEEEEHHHHHHHH
KERKTLSIETARSKDQLDYIVEVANIGFWTREFYSGKMTCSAECRRIYGFTPDEPVHFDT
HHCCEEEEEECCCHHHHHHHHHHHHCCHHHHHHHCCCCEECHHHHHHCCCCCCCCCHHHH
ILDLVVLEDRMTVVQKAHQAVTGEPYSIEYRIVTRLGETRWLETRAKALTGENPLVLGIV
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEHH
QDVTERKKAEANKALVSREIAHRFKNSMAMVQSIANQTLRNTYDPEQANRLFSERLRALS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
QAHDMLLKENWAGATIQQICATALAPFNSTFANRIHMSGPHLLVSDRVTVALSLAFYELA
HHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHEEECCCCEEEEECCHHHHHHHHHHHHH
TNAVKYGALSNEKGVINITWAIMEDKGEKKFHMRWAESRGPEVMQPARRGFGQRLLHSVL
HHHHHHCCCCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
AEELKAKCDVEFAASGLLIDVLAPITPEVFPGMGHNVPEQRIA
HHHHHHHCCHHHHCCCHHHHHHCCCCHHHCCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA