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The map label for this gene is 225686372

Identifier: 225686372

GI number: 225686372

Start: 551242

End: 552402

Strand: Direct

Name: 225686372

Synonym: BMEA_B0560

Alternate gene names: NA

Gene position: 551242-552402 (Clockwise)

Preceding gene: 225686371

Following gene: 225686374

Centisome position: 46.5

GC content: 59.09

Gene sequence:

>1161_bases
ATGGATGCCATGTTGGCCCGTAACATCATCGTCATGCCGGTTGAACTGGGGCCGTGGCGCGCCGCACTCGATAAGGAAGA
CGGCGAATGCAACTATCTCGATTCCGATTTCGAGGCTATTGCCAAGGAAGCCCTGCGCGGGCTTGATCTTGGCGTCTATT
TCCACCCCGTGCTGACCGGCATCGGCCAGGGCGCAACCATTGCCTATGCCGCCGCCTCCGATTCTCCTGATGCGACGATT
GCAGGCGCGGTTTCGCTGGACCCGACACCCGCCAGAACCCGCCTTCCCTCCTGCACGGAAAAGGCCGAGGCCATCAAGGG
GCCGGACGGAGGCTTCACTTACAGCGTCAACGCTGCCCTGCCTGCACCTGCATTGCTGATAAGCCCGCCCGGATCGCCGG
TAAACAACCCGGTAGAAGCGCGTCGGAAGAACATCGCCGTGTTGCAGACTGCGCCCGATTTTTCCGCACGCATGAAAATG
GCGGTTGATAATGTGGTCGCCATGGCAGATCAGGACGCCAAAAACGAGGCCCTGCCCATCATTGACCTGCCCGCCAAAGG
CGGCAACGCGGATATGGTCGCCGTGTTCTATTCCGGCGATGGTGGCTGGCGCGATATCGACAAATCCATTGGCGAATGGC
TGCAAGCCCATGGGGTGCATGTGATCGGTGTGGATTCGCTGCGCTATTTCTGGTCCGAACGCACACCGGAGGAAATCGCC
AACGACACAACCGCCATGATTAAAAAGGCAGATCCGACCGGAAAGCTGCCCGTTGCCGTGCTTGGCTATTCTTTCGGTGC
TGATACTTTCCCGTTCGCATGGAAATATCTCGATCCTTCCATTCAGGACCGCACTCGTATGGTGGGGCTGCTGGGCGTCG
AAACCACCACGACCTTTCAGGTTTCCATTGAAGGCTGGCTCGGCATGAATGGCGACAAGGATGTGGTGCCGGCCATTGCG
AGCATTCCGCTTGATCGCGTGGTCTGCGTTTATGGTCAGGAAGAAGACGATACCGCCTGCACCGCCGATGAGTTGAAGGG
AATGGATACCATAAAATTGCCCGGCGGCCACCATTTCGACGAGAATTATGAGCCGATTGCCGCAGCCCTTCTCGACAAGA
TGCGCAGCCGCGCCGGCTTGCCGCCGCGCCCTGCGCGCTGA

Upstream 100 bases:

>100_bases
CCTGTCGAACATTCCGGTCTATATGCCGAAGGGCGACCCGGTTGGCCTTGCCATCCTTCTCAGCGATGAGAAAGGCATTG
GCGATCAGGAGCGCAGCTAT

Downstream 100 bases:

>100_bases
GGCAAATCACATGCCGTTACCGCTTTCGCGGCAAGTGGGATATGAATGTGAGACTTTAAACTTATGGTGCTAAGTGATTG
ATTTTGGTGAGCGCGCAGGG

Product: virulence factor family protein

Products: NA

Alternate protein names: Virulence Protein; Type IV Secretory Pathway VirJ Component-Like Protein; Acid lerance Protein; Type IV Secretion System VirJ-Like Protein; Acid Virulence Protein B; AcvB-Related Protein; Type IV Secretory Pathway Virj Component-Related Protein; Virj-Like Protein; Glycosyl Transferase/Polysaccharide Deacetylase; Type IV Secretory Pathway VirJ Component; Virulance And Acid lerance Protein; Type IV Secretion System Virj-Like Protein; Virulence Factor; Chromosomal Virulence Protein B

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MDAMLARNIIVMPVELGPWRAALDKEDGECNYLDSDFEAIAKEALRGLDLGVYFHPVLTGIGQGATIAYAAASDSPDATI
AGAVSLDPTPARTRLPSCTEKAEAIKGPDGGFTYSVNAALPAPALLISPPGSPVNNPVEARRKNIAVLQTAPDFSARMKM
AVDNVVAMADQDAKNEALPIIDLPAKGGNADMVAVFYSGDGGWRDIDKSIGEWLQAHGVHVIGVDSLRYFWSERTPEEIA
NDTTAMIKKADPTGKLPVAVLGYSFGADTFPFAWKYLDPSIQDRTRMVGLLGVETTTTFQVSIEGWLGMNGDKDVVPAIA
SIPLDRVVCVYGQEEDDTACTADELKGMDTIKLPGGHHFDENYEPIAAALLDKMRSRAGLPPRPAR

Sequences:

>Translated_386_residues
MDAMLARNIIVMPVELGPWRAALDKEDGECNYLDSDFEAIAKEALRGLDLGVYFHPVLTGIGQGATIAYAAASDSPDATI
AGAVSLDPTPARTRLPSCTEKAEAIKGPDGGFTYSVNAALPAPALLISPPGSPVNNPVEARRKNIAVLQTAPDFSARMKM
AVDNVVAMADQDAKNEALPIIDLPAKGGNADMVAVFYSGDGGWRDIDKSIGEWLQAHGVHVIGVDSLRYFWSERTPEEIA
NDTTAMIKKADPTGKLPVAVLGYSFGADTFPFAWKYLDPSIQDRTRMVGLLGVETTTTFQVSIEGWLGMNGDKDVVPAIA
SIPLDRVVCVYGQEEDDTACTADELKGMDTIKLPGGHHFDENYEPIAAALLDKMRSRAGLPPRPAR
>Mature_386_residues
MDAMLARNIIVMPVELGPWRAALDKEDGECNYLDSDFEAIAKEALRGLDLGVYFHPVLTGIGQGATIAYAAASDSPDATI
AGAVSLDPTPARTRLPSCTEKAEAIKGPDGGFTYSVNAALPAPALLISPPGSPVNNPVEARRKNIAVLQTAPDFSARMKM
AVDNVVAMADQDAKNEALPIIDLPAKGGNADMVAVFYSGDGGWRDIDKSIGEWLQAHGVHVIGVDSLRYFWSERTPEEIA
NDTTAMIKKADPTGKLPVAVLGYSFGADTFPFAWKYLDPSIQDRTRMVGLLGVETTTTFQVSIEGWLGMNGDKDVVPAIA
SIPLDRVVCVYGQEEDDTACTADELKGMDTIKLPGGHHFDENYEPIAAALLDKMRSRAGLPPRPAR

Specific function: Unknown

COG id: COG3946

COG function: function code U; Type IV secretory pathway, VirJ component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41315; Mature: 41315

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAMLARNIIVMPVELGPWRAALDKEDGECNYLDSDFEAIAKEALRGLDLGVYFHPVLTG
CCCCHHCCEEEEEECCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH
IGQGATIAYAAASDSPDATIAGAVSLDPTPARTRLPSCTEKAEAIKGPDGGFTYSVNAAL
CCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCEEEEECCCC
PAPALLISPPGSPVNNPVEARRKNIAVLQTAPDFSARMKMAVDNVVAMADQDAKNEALPI
CCCEEEECCCCCCCCCCHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCE
IDLPAKGGNADMVAVFYSGDGGWRDIDKSIGEWLQAHGVHVIGVDSLRYFWSERTPEEIA
EEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEEHHHHHHHCCCCHHHHH
NDTTAMIKKADPTGKLPVAVLGYSFGADTFPFAWKYLDPSIQDRTRMVGLLGVETTTTFQ
CCHHHEEEECCCCCCCCEEEEEECCCCCCCCCEEEECCCCHHHHHHEEEEEECCEEEEEE
VSIEGWLGMNGDKDVVPAIASIPLDRVVCVYGQEEDDTACTADELKGMDTIKLPGGHHFD
EEEEEEECCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHCCCEEEECCCCCCCC
ENYEPIAAALLDKMRSRAGLPPRPAR
CCCHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MDAMLARNIIVMPVELGPWRAALDKEDGECNYLDSDFEAIAKEALRGLDLGVYFHPVLTG
CCCCHHCCEEEEEECCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH
IGQGATIAYAAASDSPDATIAGAVSLDPTPARTRLPSCTEKAEAIKGPDGGFTYSVNAAL
CCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCEEEEECCCC
PAPALLISPPGSPVNNPVEARRKNIAVLQTAPDFSARMKMAVDNVVAMADQDAKNEALPI
CCCEEEECCCCCCCCCCHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCE
IDLPAKGGNADMVAVFYSGDGGWRDIDKSIGEWLQAHGVHVIGVDSLRYFWSERTPEEIA
EEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEEHHHHHHHCCCCHHHHH
NDTTAMIKKADPTGKLPVAVLGYSFGADTFPFAWKYLDPSIQDRTRMVGLLGVETTTTFQ
CCHHHEEEECCCCCCCCEEEEEECCCCCCCCCEEEECCCCHHHHHHEEEEEECCEEEEEE
VSIEGWLGMNGDKDVVPAIASIPLDRVVCVYGQEEDDTACTADELKGMDTIKLPGGHHFD
EEEEEEECCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHCCCEEEECCCCCCCC
ENYEPIAAALLDKMRSRAGLPPRPAR
CCCHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA