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The map label for this gene is oppB [H]

Identifier: 225686328

GI number: 225686328

Start: 497426

End: 498349

Strand: Reverse

Name: oppB [H]

Synonym: BMEA_B0510

Alternate gene names: 225686328

Gene position: 498349-497426 (Counterclockwise)

Preceding gene: 225686329

Following gene: 225686327

Centisome position: 42.04

GC content: 58.01

Gene sequence:

>924_bases
ATGTTGGGCTACACGCTCCGAAGATTGGGTAGTGCAATACCCACAATCTTCATCATCATCACGCTGACATTTTTCCTGAT
CCGGCTTGCGCCGGGCGGCCCGTTCGATCTGGAACGCCCAATCGACCCGCTGATCCTGGAGAACCTCAAGAAAGCCTATA
ATATGGATGCGCCGCTATGGCAGCAGTATCTCATATATCTGGGCAATCTGTTGTATGGCGATCTTGGCCCAAGCTTCACC
CGGCGTGACTTCACGGTGAACGATCTTTTCGCTTCCGGCCTTCCGGTCTCGATCATACTCGGCACGCTTGGCCTGACCCT
TGCCGCCATCATCGGCACTTTCCTCGGCACGCTGGCTGCGCTGAAACAGAATTCGGCAACTGATTATTTTGTCGTCGCAC
TTGCCACTTTCGGCATCACCACGCCCAATTTCGTCGTGGCCCCTTTGCTTAGCCTCCTTTTTGGCGTCATTCTCGGCTGG
GTTCCGGCTGGCGGCTGGTCTTCTGCCAATGTAGCCTATTGGATATTGCCGGTCCTGACACTGGCATTGCCGCAAGTGGG
CGTGATCGCGCGCCTCGTGCGCGGCGCAACCATCGAGGCACTTCGCGCCAATCACGTGCGCACCGCCCGCGCCTATGGCC
TGCCCTCGCGCGTGGTGGTCGGCATTCATGCACTGCGCGCCGCCATGCTTCCCGCCGTTTCCTATCTGGGCCCAACCGCC
GCCGCCCTTCTCACCGGCTCGGTCGTGGTGGAAACCATTTTCGGCATTCCCGGCATTGGCCGCTACTTCGTGCAGGGCGC
CCTCAGCCGCGATTACACCCTCGTCATGGGCACGGTTGTCGTCATCTCGATTTTCGTGATTGTTTTCAATCTGATCGTCG
ATCTTCTTTATGCATGGCTTGATCCGAGGGTTCGCTATGACTGA

Upstream 100 bases:

>100_bases
CAACCTCGCTTCAATGCGTTGAAAAATGCCGCAAAACAAATAGTTAAAGCGGTTTAGCGATAGGAATCGCTTGGCGCTCC
GGCAAGGAAGGGAAAAGAAC

Downstream 100 bases:

>100_bases
TCTCACTGTACCAACGGAAACCGCCGAACTCAGCATGCCAAGCCGTTCGCTCTGGCAGGATGCCTTCCTGCGCTTGCGCA
AGAACAAGGCAGCCGTTACC

Product: hypothetical protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MLGYTLRRLGSAIPTIFIIITLTFFLIRLAPGGPFDLERPIDPLILENLKKAYNMDAPLWQQYLIYLGNLLYGDLGPSFT
RRDFTVNDLFASGLPVSIILGTLGLTLAAIIGTFLGTLAALKQNSATDYFVVALATFGITTPNFVVAPLLSLLFGVILGW
VPAGGWSSANVAYWILPVLTLALPQVGVIARLVRGATIEALRANHVRTARAYGLPSRVVVGIHALRAAMLPAVSYLGPTA
AALLTGSVVVETIFGIPGIGRYFVQGALSRDYTLVMGTVVVISIFVIVFNLIVDLLYAWLDPRVRYD

Sequences:

>Translated_307_residues
MLGYTLRRLGSAIPTIFIIITLTFFLIRLAPGGPFDLERPIDPLILENLKKAYNMDAPLWQQYLIYLGNLLYGDLGPSFT
RRDFTVNDLFASGLPVSIILGTLGLTLAAIIGTFLGTLAALKQNSATDYFVVALATFGITTPNFVVAPLLSLLFGVILGW
VPAGGWSSANVAYWILPVLTLALPQVGVIARLVRGATIEALRANHVRTARAYGLPSRVVVGIHALRAAMLPAVSYLGPTA
AALLTGSVVVETIFGIPGIGRYFVQGALSRDYTLVMGTVVVISIFVIVFNLIVDLLYAWLDPRVRYD
>Mature_307_residues
MLGYTLRRLGSAIPTIFIIITLTFFLIRLAPGGPFDLERPIDPLILENLKKAYNMDAPLWQQYLIYLGNLLYGDLGPSFT
RRDFTVNDLFASGLPVSIILGTLGLTLAAIIGTFLGTLAALKQNSATDYFVVALATFGITTPNFVVAPLLSLLFGVILGW
VPAGGWSSANVAYWILPVLTLALPQVGVIARLVRGATIEALRANHVRTARAYGLPSRVVVGIHALRAAMLPAVSYLGPTA
AALLTGSVVVETIFGIPGIGRYFVQGALSRDYTLVMGTVVVISIFVIVFNLIVDLLYAWLDPRVRYD

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787497, Length=306, Percent_Identity=49.6732026143791, Blast_Score=320, Evalue=9e-89,
Organism=Escherichia coli, GI1789965, Length=339, Percent_Identity=35.1032448377581, Blast_Score=185, Evalue=3e-48,
Organism=Escherichia coli, GI1787053, Length=309, Percent_Identity=36.2459546925566, Blast_Score=184, Evalue=9e-48,
Organism=Escherichia coli, GI1789888, Length=313, Percent_Identity=34.185303514377, Blast_Score=161, Evalue=5e-41,
Organism=Escherichia coli, GI1787761, Length=316, Percent_Identity=34.8101265822785, Blast_Score=133, Evalue=1e-32,
Organism=Escherichia coli, GI1788504, Length=363, Percent_Identity=26.4462809917355, Blast_Score=124, Evalue=1e-29,
Organism=Escherichia coli, GI1787550, Length=275, Percent_Identity=27.2727272727273, Blast_Score=109, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33152; Mature: 33152

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGYTLRRLGSAIPTIFIIITLTFFLIRLAPGGPFDLERPIDPLILENLKKAYNMDAPLW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHH
QQYLIYLGNLLYGDLGPSFTRRDFTVNDLFASGLPVSIILGTLGLTLAAIIGTFLGTLAA
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LKQNSATDYFVVALATFGITTPNFVVAPLLSLLFGVILGWVPAGGWSSANVAYWILPVLT
HHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
LALPQVGVIARLVRGATIEALRANHVRTARAYGLPSRVVVGIHALRAAMLPAVSYLGPTA
HHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHH
AALLTGSVVVETIFGIPGIGRYFVQGALSRDYTLVMGTVVVISIFVIVFNLIVDLLYAWL
HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DPRVRYD
CCCCCCC
>Mature Secondary Structure
MLGYTLRRLGSAIPTIFIIITLTFFLIRLAPGGPFDLERPIDPLILENLKKAYNMDAPLW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHH
QQYLIYLGNLLYGDLGPSFTRRDFTVNDLFASGLPVSIILGTLGLTLAAIIGTFLGTLAA
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LKQNSATDYFVVALATFGITTPNFVVAPLLSLLFGVILGWVPAGGWSSANVAYWILPVLT
HHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
LALPQVGVIARLVRGATIEALRANHVRTARAYGLPSRVVVGIHALRAAMLPAVSYLGPTA
HHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHH
AALLTGSVVVETIFGIPGIGRYFVQGALSRDYTLVMGTVVVISIFVIVFNLIVDLLYAWL
HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DPRVRYD
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]