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The map label for this gene is oppC [H]

Identifier: 225686327

GI number: 225686327

Start: 496300

End: 497433

Strand: Reverse

Name: oppC [H]

Synonym: BMEA_B0509

Alternate gene names: 225686327

Gene position: 497433-496300 (Counterclockwise)

Preceding gene: 225686328

Following gene: 225686326

Centisome position: 41.96

GC content: 58.11

Gene sequence:

>1134_bases
ATGACTGATCTCACTGTACCAACGGAAACCGCCGAACTCAGCATGCCAAGCCGTTCGCTCTGGCAGGATGCCTTCCTGCG
CTTGCGCAAGAACAAGGCAGCCGTTACCAGTGCCATCGTTCTCGTGCTGATGGCTCTTATCGGTATATTCAGCCCCCTGC
TCAGCCCCCACCCCTATGATAAAATCTATCCGCAATTCGTGCGTGTGGCGCCAAGCCTGGAAGCCTATCCCCGCGCCGAC
ACCATCATGCCGGGGCTTGAACAGGTATTGGCCCGCGCACGGCTGAAAGCAGCCGGAGAACCTGAGCTGACCGGCAATCA
ACTGGTCCTCAATGTGACGGCGCAACGCCCGACGGATGAGCGCGTGCTGCGCTATTTCCAGCGTTCCGATCTCTTCAGCA
ACCCGAAGATCGAACTTGCACCCGATGGACTTTCCGGCAAACTGACGATGAATGTGTCGCGCAATTATTTCCTGCTCGGC
ACGGATAATCTCGGTCGCGATCTGATGACGCGCATCTTCATCGGCGTGCGTATGTCGCTTGCCATTGGCCTGCTTGCGTC
TGCAATGGCGCTGGTGCTCGGTGTCGGCTATGGCGCTATTTCCGGCTATCTGGGCGGGCGCGTCGACAATGTGATGATGC
GGCTGGTCGATATTCTCTATTCGTTGCCCTTCATCTTCTTCGTGATCCTGATGCTCGTCTTCTTCGGGCGGTCCATTTTC
ATCATCTTCATCGCCATCGGCGCAACGGAGTGGCTGGATATGGCGCGCATCGTGCGCGGACAGACCCTGAGCCTCAAACG
GCAGGAATTCGTGCAGGCCGCAGAAGCATTGGGCGCGACGCGGAGCGGTGTCATCACCCGCCATATCATTCCCAATGCGC
TTGGTCCCTTCATCGTTTTCGTGACGCTTCTGGTGCCGAAGGCCATTCTTCTGGAAAGCCTTCTTTCTTTCCTTGGTCTC
GGTGTGCAAGACCCCCTCACCTCGCTCGGCCTTCTCATCTCGGAAGGCGCGCAAAACATGCGCGGCGCAAGCTGGCAATT
GATCTGGCCTGCCGCAACGCTGACCATCATCCTGTTTGCGCTGAACTTCCTTGGCGACGGCCTGCGCGACAGCCTTGACC
CGAAGGATCGCTGA

Upstream 100 bases:

>100_bases
ACCCTCGTCATGGGCACGGTTGTCGTCATCTCGATTTTCGTGATTGTTTTCAATCTGATCGTCGATCTTCTTTATGCATG
GCTTGATCCGAGGGTTCGCT

Downstream 100 bases:

>100_bases
GATGACGACGGAAAACATTCTGAGCGTGCGCGACCTGCGCGTCACCTTTGATACGCATGACGGGCCGGTGCAGGCCGTGC
GCGGCATCAATCTCGACGTC

Product: binding-protein-dependent transport systems inner membrane component

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MTDLTVPTETAELSMPSRSLWQDAFLRLRKNKAAVTSAIVLVLMALIGIFSPLLSPHPYDKIYPQFVRVAPSLEAYPRAD
TIMPGLEQVLARARLKAAGEPELTGNQLVLNVTAQRPTDERVLRYFQRSDLFSNPKIELAPDGLSGKLTMNVSRNYFLLG
TDNLGRDLMTRIFIGVRMSLAIGLLASAMALVLGVGYGAISGYLGGRVDNVMMRLVDILYSLPFIFFVILMLVFFGRSIF
IIFIAIGATEWLDMARIVRGQTLSLKRQEFVQAAEALGATRSGVITRHIIPNALGPFIVFVTLLVPKAILLESLLSFLGL
GVQDPLTSLGLLISEGAQNMRGASWQLIWPAATLTIILFALNFLGDGLRDSLDPKDR

Sequences:

>Translated_377_residues
MTDLTVPTETAELSMPSRSLWQDAFLRLRKNKAAVTSAIVLVLMALIGIFSPLLSPHPYDKIYPQFVRVAPSLEAYPRAD
TIMPGLEQVLARARLKAAGEPELTGNQLVLNVTAQRPTDERVLRYFQRSDLFSNPKIELAPDGLSGKLTMNVSRNYFLLG
TDNLGRDLMTRIFIGVRMSLAIGLLASAMALVLGVGYGAISGYLGGRVDNVMMRLVDILYSLPFIFFVILMLVFFGRSIF
IIFIAIGATEWLDMARIVRGQTLSLKRQEFVQAAEALGATRSGVITRHIIPNALGPFIVFVTLLVPKAILLESLLSFLGL
GVQDPLTSLGLLISEGAQNMRGASWQLIWPAATLTIILFALNFLGDGLRDSLDPKDR
>Mature_376_residues
TDLTVPTETAELSMPSRSLWQDAFLRLRKNKAAVTSAIVLVLMALIGIFSPLLSPHPYDKIYPQFVRVAPSLEAYPRADT
IMPGLEQVLARARLKAAGEPELTGNQLVLNVTAQRPTDERVLRYFQRSDLFSNPKIELAPDGLSGKLTMNVSRNYFLLGT
DNLGRDLMTRIFIGVRMSLAIGLLASAMALVLGVGYGAISGYLGGRVDNVMMRLVDILYSLPFIFFVILMLVFFGRSIFI
IFIAIGATEWLDMARIVRGQTLSLKRQEFVQAAEALGATRSGVITRHIIPNALGPFIVFVTLLVPKAILLESLLSFLGLG
VQDPLTSLGLLISEGAQNMRGASWQLIWPAATLTIILFALNFLGDGLRDSLDPKDR

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787498, Length=238, Percent_Identity=57.563025210084, Blast_Score=248, Evalue=5e-67,
Organism=Escherichia coli, GI1787054, Length=217, Percent_Identity=37.3271889400922, Blast_Score=154, Evalue=1e-38,
Organism=Escherichia coli, GI1787760, Length=232, Percent_Identity=35.7758620689655, Blast_Score=151, Evalue=6e-38,
Organism=Escherichia coli, GI1789889, Length=217, Percent_Identity=35.0230414746544, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1789964, Length=218, Percent_Identity=37.6146788990826, Blast_Score=125, Evalue=5e-30,
Organism=Escherichia coli, GI1788505, Length=218, Percent_Identity=31.651376146789, Blast_Score=117, Evalue=9e-28,
Organism=Escherichia coli, GI1787549, Length=216, Percent_Identity=26.8518518518519, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 41409; Mature: 41277

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLTVPTETAELSMPSRSLWQDAFLRLRKNKAAVTSAIVLVLMALIGIFSPLLSPHPYD
CCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
KIYPQFVRVAPSLEAYPRADTIMPGLEQVLARARLKAAGEPELTGNQLVLNVTAQRPTDE
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHH
RVLRYFQRSDLFSNPKIELAPDGLSGKLTMNVSRNYFLLGTDNLGRDLMTRIFIGVRMSL
HHHHHHHHHCCCCCCCEEECCCCCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHH
AIGLLASAMALVLGVGYGAISGYLGGRVDNVMMRLVDILYSLPFIFFVILMLVFFGRSIF
HHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
IIFIAIGATEWLDMARIVRGQTLSLKRQEFVQAAEALGATRSGVITRHIIPNALGPFIVF
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHH
VTLLVPKAILLESLLSFLGLGVQDPLTSLGLLISEGAQNMRGASWQLIWPAATLTIILFA
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHCCCCCEEEECHHHHHHHHHHH
LNFLGDGLRDSLDPKDR
HHHHCCHHHCCCCCCCC
>Mature Secondary Structure 
TDLTVPTETAELSMPSRSLWQDAFLRLRKNKAAVTSAIVLVLMALIGIFSPLLSPHPYD
CCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
KIYPQFVRVAPSLEAYPRADTIMPGLEQVLARARLKAAGEPELTGNQLVLNVTAQRPTDE
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHH
RVLRYFQRSDLFSNPKIELAPDGLSGKLTMNVSRNYFLLGTDNLGRDLMTRIFIGVRMSL
HHHHHHHHHCCCCCCCEEECCCCCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHH
AIGLLASAMALVLGVGYGAISGYLGGRVDNVMMRLVDILYSLPFIFFVILMLVFFGRSIF
HHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
IIFIAIGATEWLDMARIVRGQTLSLKRQEFVQAAEALGATRSGVITRHIIPNALGPFIVF
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHH
VTLLVPKAILLESLLSFLGLGVQDPLTSLGLLISEGAQNMRGASWQLIWPAATLTIILFA
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHCCCCCEEEECHHHHHHHHHHH
LNFLGDGLRDSLDPKDR
HHHHCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]