| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is mutL
Identifier: 225631007
GI number: 225631007
Start: 1419589
End: 1421406
Strand: Direct
Name: mutL
Synonym: WRi_013350
Alternate gene names: 225631007
Gene position: 1419589-1421406 (Clockwise)
Preceding gene: 225631006
Following gene: 225631008
Centisome position: 98.18
GC content: 36.52
Gene sequence:
>1818_bases ATGGCAATAATTCTTTTAGACACAAAAACCATAAACCGTATAGCAGCGGGGGAGGTGATAGAAAGGCCAGCAAGTGTAGT AAAGGAATTAGTGGAAAATGCAATAGATGCTGGAAGTTTAGAAATAGAGATTAAAATAGAAAGTGGTGGGCGTAACCTTA TTATTGTGACAGATGATGGTAACGGAGTAGAAAAAAACGATTTAGAACTTGCGTTTATGCGCCATGCTACTTCAAAATTG AGCGATAGTGAGTTGATAGAAATCAAGCATCTTGGCTTTAGAGGAGAAGCTCTGCCTTCAATTGCAGCAGTAAGTAGGAT AAAATTATCGTCTAAGGCAAGAGAAGCAAGTGAAGCATGGTCTATAAGTTATGAGGGTGGAGAGAAAATAGGGGAGCAAA CTCCTTACTCTTTATCGCAAGGGACACATATTGAAGTACGAGATTTATTTTTTGCCACTCCAAATAGACTAAAATTTCTA AAAACCGAAAGAGCAGAAACTCAAAGCATTGTTGATATTGTAAACAACCTAGCAATGATTAACTATCATATAGGGTTTAC TCTCACTTCAGGTAATAAAAAGCTCTTAAAATACGCTAAGCAGACTTCGTTATTTCATAGATTGTGTGAAGTAGAAGAAG AATTTCAGGGCAGTTCTCTGGAGATTAATGAAGAAGAAGACGGCATTAAACTTACGGGACACATCTGTAAGCCGACCGTC AATCGTGGTAAGTCCACTCAGATCTATACGTTTGTTAATGGAAGGCCAATCAAAGATAATCTACTTATTGGCGCAGTTAG GTATGCATATCATGATTTTATTCCAAGCGATAGGTATCCTTTCGCAGCGTTACATTTAGAGATACCTTATGATCAAGTAG ATGTAAATGTGCATCCAAATAAGTCAGAAGTAAGGTTTCAGAATAAGAAGCTCATATATGAGATAATGACAAGAGGATTA ATTAAAGCATTGTCAAGAAGGATAGGCACCTTTCCAGCGCATGACCAGAAAATGGATTCAACATTGCCAGATCCTTTTGA TAAACCTGATGTTCAAAATGAAAGAAGGCCAAGTCCTTTTGAAAATCAACTAATAAAAGAATTTGCTTCTCCAAATGAAA AAGCAAAAGGCTTATCAGAACAGTCAAAATCGTTTGATTATACCGGCATACAGAAATTCCCAGCACAAGCGGAGGCTATG GTTCTAGAAAAAAAGGTGTTAGAGCAAGTTGATTTGATAGAGAGCCACCCGCTCGGGTTTGCACGCTGTCAGGTCTATAA TACTTATATTATTGCAGAGGTAAGAGACAAATTGATTATAGTCGATCAGCATGCAGCCCACGAGAGATTAGTATATGAAT GCCTAAAACAAAAATCAAGTATAAAAAGACAAAAACTACTTCTTCCTGAAACGGTTGAAATCAAAAATCAAGCCGGAATG GAGATGATTGAAATCTATAAAGATAAGTTATTTGAAATGGGTTTTGATATTGAAATCAAATCAGAGAATAAAGTGATAGT AAAAGAAATCCCTGCAATTTTGGGAGCAATAGATGTGAAAGAGATGCTAATTAACATAATTGATAGATTAACGGAAATAG AAGATACATTGCCAGTAGAAGATAAAGTGAACAAAATATTGGCCACTATCGCTTGTCATGGATCAATTAGAGCGGGTAGA AAAATGAGGTTAGATGAAATGAATGAGCTGCTGAGACAAATGGAAAAAACACCATATTCCGGGCAATGCAACCACGGAAG ACCAACTTATATAGAAATGAAACTCAGTGATATTGAAAAACTTTTTGAGCGTAGGTAA
Upstream 100 bases:
>100_bases ATATTGTCAATTTCCAACAGTGAAATTGCAGGTAGGTTAAAAAAGTGGAGAGAGAAACAGACCAAAGAAGTAAAAGAAAA ACCAGTTTCATAATAAATCT
Downstream 100 bases:
>100_bases TGAGGTTGCCATAAATATGTAACCTCGTCATCCAAGTAGCTCATAGAAACGGATTAAACGAAAAAACTTCCTTGACAAAC TCCGTCAGCCCCCTTATCAT
Product: DNA mismatch repair protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 605; Mature: 604
Protein sequence:
>605_residues MAIILLDTKTINRIAAGEVIERPASVVKELVENAIDAGSLEIEIKIESGGRNLIIVTDDGNGVEKNDLELAFMRHATSKL SDSELIEIKHLGFRGEALPSIAAVSRIKLSSKAREASEAWSISYEGGEKIGEQTPYSLSQGTHIEVRDLFFATPNRLKFL KTERAETQSIVDIVNNLAMINYHIGFTLTSGNKKLLKYAKQTSLFHRLCEVEEEFQGSSLEINEEEDGIKLTGHICKPTV NRGKSTQIYTFVNGRPIKDNLLIGAVRYAYHDFIPSDRYPFAALHLEIPYDQVDVNVHPNKSEVRFQNKKLIYEIMTRGL IKALSRRIGTFPAHDQKMDSTLPDPFDKPDVQNERRPSPFENQLIKEFASPNEKAKGLSEQSKSFDYTGIQKFPAQAEAM VLEKKVLEQVDLIESHPLGFARCQVYNTYIIAEVRDKLIIVDQHAAHERLVYECLKQKSSIKRQKLLLPETVEIKNQAGM EMIEIYKDKLFEMGFDIEIKSENKVIVKEIPAILGAIDVKEMLINIIDRLTEIEDTLPVEDKVNKILATIACHGSIRAGR KMRLDEMNELLRQMEKTPYSGQCNHGRPTYIEMKLSDIEKLFERR
Sequences:
>Translated_605_residues MAIILLDTKTINRIAAGEVIERPASVVKELVENAIDAGSLEIEIKIESGGRNLIIVTDDGNGVEKNDLELAFMRHATSKL SDSELIEIKHLGFRGEALPSIAAVSRIKLSSKAREASEAWSISYEGGEKIGEQTPYSLSQGTHIEVRDLFFATPNRLKFL KTERAETQSIVDIVNNLAMINYHIGFTLTSGNKKLLKYAKQTSLFHRLCEVEEEFQGSSLEINEEEDGIKLTGHICKPTV NRGKSTQIYTFVNGRPIKDNLLIGAVRYAYHDFIPSDRYPFAALHLEIPYDQVDVNVHPNKSEVRFQNKKLIYEIMTRGL IKALSRRIGTFPAHDQKMDSTLPDPFDKPDVQNERRPSPFENQLIKEFASPNEKAKGLSEQSKSFDYTGIQKFPAQAEAM VLEKKVLEQVDLIESHPLGFARCQVYNTYIIAEVRDKLIIVDQHAAHERLVYECLKQKSSIKRQKLLLPETVEIKNQAGM EMIEIYKDKLFEMGFDIEIKSENKVIVKEIPAILGAIDVKEMLINIIDRLTEIEDTLPVEDKVNKILATIACHGSIRAGR KMRLDEMNELLRQMEKTPYSGQCNHGRPTYIEMKLSDIEKLFERR >Mature_604_residues AIILLDTKTINRIAAGEVIERPASVVKELVENAIDAGSLEIEIKIESGGRNLIIVTDDGNGVEKNDLELAFMRHATSKLS DSELIEIKHLGFRGEALPSIAAVSRIKLSSKAREASEAWSISYEGGEKIGEQTPYSLSQGTHIEVRDLFFATPNRLKFLK TERAETQSIVDIVNNLAMINYHIGFTLTSGNKKLLKYAKQTSLFHRLCEVEEEFQGSSLEINEEEDGIKLTGHICKPTVN RGKSTQIYTFVNGRPIKDNLLIGAVRYAYHDFIPSDRYPFAALHLEIPYDQVDVNVHPNKSEVRFQNKKLIYEIMTRGLI KALSRRIGTFPAHDQKMDSTLPDPFDKPDVQNERRPSPFENQLIKEFASPNEKAKGLSEQSKSFDYTGIQKFPAQAEAMV LEKKVLEQVDLIESHPLGFARCQVYNTYIIAEVRDKLIIVDQHAAHERLVYECLKQKSSIKRQKLLLPETVEIKNQAGME MIEIYKDKLFEMGFDIEIKSENKVIVKEIPAILGAIDVKEMLINIIDRLTEIEDTLPVEDKVNKILATIACHGSIRAGRK MRLDEMNELLRQMEKTPYSGQCNHGRPTYIEMKLSDIEKLFERR
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family
Homologues:
Organism=Homo sapiens, GI4557757, Length=321, Percent_Identity=35.202492211838, Blast_Score=174, Evalue=3e-43, Organism=Homo sapiens, GI4505913, Length=348, Percent_Identity=29.3103448275862, Blast_Score=143, Evalue=6e-34, Organism=Homo sapiens, GI310128478, Length=348, Percent_Identity=29.3103448275862, Blast_Score=142, Evalue=6e-34, Organism=Homo sapiens, GI4505911, Length=330, Percent_Identity=29.3939393939394, Blast_Score=126, Evalue=7e-29, Organism=Homo sapiens, GI189458898, Length=330, Percent_Identity=29.3939393939394, Blast_Score=125, Evalue=2e-28, Organism=Homo sapiens, GI189458896, Length=316, Percent_Identity=29.1139240506329, Blast_Score=120, Evalue=5e-27, Organism=Homo sapiens, GI310128480, Length=300, Percent_Identity=27.6666666666667, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI263191589, Length=230, Percent_Identity=30, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI91992162, Length=352, Percent_Identity=23.5795454545455, Blast_Score=70, Evalue=6e-12, Organism=Homo sapiens, GI91992160, Length=352, Percent_Identity=23.5795454545455, Blast_Score=70, Evalue=7e-12, Organism=Escherichia coli, GI1790612, Length=338, Percent_Identity=39.9408284023669, Blast_Score=236, Evalue=2e-63, Organism=Caenorhabditis elegans, GI71991825, Length=316, Percent_Identity=31.9620253164557, Blast_Score=161, Evalue=8e-40, Organism=Caenorhabditis elegans, GI17562796, Length=354, Percent_Identity=25.7062146892655, Blast_Score=119, Evalue=7e-27, Organism=Saccharomyces cerevisiae, GI6323819, Length=333, Percent_Identity=35.4354354354354, Blast_Score=181, Evalue=4e-46, Organism=Saccharomyces cerevisiae, GI6324247, Length=358, Percent_Identity=26.2569832402235, Blast_Score=120, Evalue=5e-28, Organism=Saccharomyces cerevisiae, GI6323063, Length=404, Percent_Identity=25.990099009901, Blast_Score=77, Evalue=7e-15, Organism=Saccharomyces cerevisiae, GI6325093, Length=172, Percent_Identity=29.6511627906977, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI17136968, Length=308, Percent_Identity=33.4415584415584, Blast_Score=175, Evalue=9e-44, Organism=Drosophila melanogaster, GI17136970, Length=350, Percent_Identity=24.5714285714286, Blast_Score=100, Evalue=3e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MUTL_WOLWR (C0R515)
Other databases:
- EMBL: CP001391 - RefSeq: YP_002727798.1 - ProteinModelPortal: C0R515 - SMR: C0R515 - EnsemblBacteria: EBWOLT00000001700 - GeneID: 7670044 - GenomeReviews: CP001391_GR - KEGG: wri:WRi_013350 - GeneTree: EBGT00050000031443 - OMA: FLFINNR - ProtClustDB: PRK00095 - HAMAP: MF_00149 - InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 - Gene3D: G3DSA:3.30.565.10 - Gene3D: G3DSA:3.30.230.10 - PANTHER: PTHR10073 - SMART: SM00387 - SMART: SM00853 - TIGRFAMs: TIGR00585
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C; SSF55874 ATP_bd_ATPase; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: NA
Molecular weight: Translated: 68702; Mature: 68571
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIILLDTKTINRIAAGEVIERPASVVKELVENAIDAGSLEIEIKIESGGRNLIIVTDDG CEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEEECCC NGVEKNDLELAFMRHATSKLSDSELIEIKHLGFRGEALPSIAAVSRIKLSSKAREASEAW CCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHE SISYEGGEKIGEQTPYSLSQGTHIEVRDLFFATPNRLKFLKTERAETQSIVDIVNNLAMI EEEECCCHHCCCCCCCCCCCCCEEEEEHEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEE NYHIGFTLTSGNKKLLKYAKQTSLFHRLCEVEEEFQGSSLEINEEEDGIKLTGHICKPTV EEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEEEEECCCC NRGKSTQIYTFVNGRPIKDNLLIGAVRYAYHDFIPSDRYPFAALHLEIPYDQVDVNVHPN CCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEECCC KSEVRFQNKKLIYEIMTRGLIKALSRRIGTFPAHDQKMDSTLPDPFDKPDVQNERRPSPF CHHEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHH ENQLIKEFASPNEKAKGLSEQSKSFDYTGIQKFPAQAEAMVLEKKVLEQVDLIESHPLGF HHHHHHHHCCCCHHHCCCHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHCCCCCE ARCQVYNTYIIAEVRDKLIIVDQHAAHERLVYECLKQKSSIKRQKLLLPETVEIKNQAGM EEEEEEEEEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCH EMIEIYKDKLFEMGFDIEIKSENKVIVKEIPAILGAIDVKEMLINIIDRLTEIEDTLPVE HHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH DKVNKILATIACHGSIRAGRKMRLDEMNELLRQMEKTPYSGQCNHGRPTYIEMKLSDIEK HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHH LFERR HHHCC >Mature Secondary Structure AIILLDTKTINRIAAGEVIERPASVVKELVENAIDAGSLEIEIKIESGGRNLIIVTDDG EEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEEECCC NGVEKNDLELAFMRHATSKLSDSELIEIKHLGFRGEALPSIAAVSRIKLSSKAREASEAW CCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHE SISYEGGEKIGEQTPYSLSQGTHIEVRDLFFATPNRLKFLKTERAETQSIVDIVNNLAMI EEEECCCHHCCCCCCCCCCCCCEEEEEHEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEE NYHIGFTLTSGNKKLLKYAKQTSLFHRLCEVEEEFQGSSLEINEEEDGIKLTGHICKPTV EEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEEEEECCCC NRGKSTQIYTFVNGRPIKDNLLIGAVRYAYHDFIPSDRYPFAALHLEIPYDQVDVNVHPN CCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEECCC KSEVRFQNKKLIYEIMTRGLIKALSRRIGTFPAHDQKMDSTLPDPFDKPDVQNERRPSPF CHHEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHH ENQLIKEFASPNEKAKGLSEQSKSFDYTGIQKFPAQAEAMVLEKKVLEQVDLIESHPLGF HHHHHHHHCCCCHHHCCCHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHCCCCCE ARCQVYNTYIIAEVRDKLIIVDQHAAHERLVYECLKQKSSIKRQKLLLPETVEIKNQAGM EEEEEEEEEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCH EMIEIYKDKLFEMGFDIEIKSENKVIVKEIPAILGAIDVKEMLINIIDRLTEIEDTLPVE HHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH DKVNKILATIACHGSIRAGRKMRLDEMNELLRQMEKTPYSGQCNHGRPTYIEMKLSDIEK HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHH LFERR HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA