| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is parA [H]
Identifier: 225630882
GI number: 225630882
Start: 1286709
End: 1287551
Strand: Direct
Name: parA [H]
Synonym: WRi_011960
Alternate gene names: 225630882
Gene position: 1286709-1287551 (Clockwise)
Preceding gene: 225630881
Following gene: 225630883
Centisome position: 88.99
GC content: 36.42
Gene sequence:
>843_bases GTGAGCAAGATTATTGCAATAGTAAATCAAAAGGGTGGAGTTGGCAAAACCACAACTAGTATAAATTTATCGACAGCCTT TGCTGCTGTGGGAAAAAGCACTTTATTGGTAGATCTTGATCCTCAAGGAAATGCTAGCACCGGGCTCGGGATTTCTTATC GTAGTAGGGAAGAAAAAAATATATACAAAATACTACTAAGCAGCGAAAATAAATTGATAGAATCGGCAATTTTCAATATA AAGGAAATTCCAAATTTATCACTAATTTCGTCAGTAGTTGATTTATCAGCTGCAGAAATTGAATTATCGCAACTTGAGCG AGGAAAATTTGTGCTAAAAAGCGCATTAGAGAAGATACGCGATAATTATGAGTATATAATCATCGATTGCCCTCCATCAC TTGGGCTTTTGACCATAAATGCTTTGACTGCTGCTAATTCTATTATTGTCCCTCTTCAGTGTGAATTTTTTGCTTTGGAG GGATTAAGCCATTTAGTTAAAACTGTAGAGCTGATAAAAAGAAATAACCTAAACCCTTTTTTGGCAATAGAAGGGATAGT GTTAACAATGTATGACAGGCGCAACAAACTTAGTGAGCAGATTAAAAACGATATTTGTCAGTATTTAAATGATAAAGTAT ACAAAACTATCATCCCATTGTATGAGACTGTTATTCCACGTAACGTACGGTTATCAGAAGCACCTTCTCATGGAAAACCT GCTATTGTGTATGATCTTAAATGTCCTGGTGCACAAGCGTATATAAGTTTGGCAAGGGAAATTTTAAAAAAGCACGCGAG CAGTTGTAAGGAGAAGAAGCTAGTAAGCGAGGGCGTGGTATGA
Upstream 100 bases:
>100_bases GACAGTCTAATTTTAGTGTGGTTAACAACAAAAAAATTTTCTAATGCAAAAGTTTCTTGCATATATACAATAGAATTATT TTATACATAAGATAAAAGGC
Downstream 100 bases:
>100_bases AGGATGATAGACGCCTCGGCAGAGGTCTTGCCGGTCTCATAGGCGATAATTATGATAATAAAGAAGATCGACAAGAGCAT TTGCCTATTTCATTACTGCA
Product: Chromosome partitioning protein, ParA family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MSKIIAIVNQKGGVGKTTTSINLSTAFAAVGKSTLLVDLDPQGNASTGLGISYRSREEKNIYKILLSSENKLIESAIFNI KEIPNLSLISSVVDLSAAEIELSQLERGKFVLKSALEKIRDNYEYIIIDCPPSLGLLTINALTAANSIIVPLQCEFFALE GLSHLVKTVELIKRNNLNPFLAIEGIVLTMYDRRNKLSEQIKNDICQYLNDKVYKTIIPLYETVIPRNVRLSEAPSHGKP AIVYDLKCPGAQAYISLAREILKKHASSCKEKKLVSEGVV
Sequences:
>Translated_280_residues MSKIIAIVNQKGGVGKTTTSINLSTAFAAVGKSTLLVDLDPQGNASTGLGISYRSREEKNIYKILLSSENKLIESAIFNI KEIPNLSLISSVVDLSAAEIELSQLERGKFVLKSALEKIRDNYEYIIIDCPPSLGLLTINALTAANSIIVPLQCEFFALE GLSHLVKTVELIKRNNLNPFLAIEGIVLTMYDRRNKLSEQIKNDICQYLNDKVYKTIIPLYETVIPRNVRLSEAPSHGKP AIVYDLKCPGAQAYISLAREILKKHASSCKEKKLVSEGVV >Mature_279_residues SKIIAIVNQKGGVGKTTTSINLSTAFAAVGKSTLLVDLDPQGNASTGLGISYRSREEKNIYKILLSSENKLIESAIFNIK EIPNLSLISSVVDLSAAEIELSQLERGKFVLKSALEKIRDNYEYIIIDCPPSLGLLTINALTAANSIIVPLQCEFFALEG LSHLVKTVELIKRNNLNPFLAIEGIVLTMYDRRNKLSEQIKNDICQYLNDKVYKTIIPLYETVIPRNVRLSEAPSHGKPA IVYDLKCPGAQAYISLAREILKKHASSCKEKKLVSEGVV
Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication [H]
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the parA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 30834; Mature: 30703
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIIAIVNQKGGVGKTTTSINLSTAFAAVGKSTLLVDLDPQGNASTGLGISYRSREEKN CCCEEEEEECCCCCCCCEEEEEHHHHHHHCCCCEEEEEECCCCCCCCCCCEEECCCCCCC IYKILLSSENKLIESAIFNIKEIPNLSLISSVVDLSAAEIELSQLERGKFVLKSALEKIR CEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH DNYEYIIIDCPPSLGLLTINALTAANSIIVPLQCEFFALEGLSHLVKTVELIKRNNLNPF CCCCEEEEECCCCCCEEEEEHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCE LAIEGIVLTMYDRRNKLSEQIKNDICQYLNDKVYKTIIPLYETVIPRNVRLSEAPSHGKP EEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCC AIVYDLKCPGAQAYISLAREILKKHASSCKEKKLVSEGVV EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SKIIAIVNQKGGVGKTTTSINLSTAFAAVGKSTLLVDLDPQGNASTGLGISYRSREEKN CCEEEEEECCCCCCCCEEEEEHHHHHHHCCCCEEEEEECCCCCCCCCCCEEECCCCCCC IYKILLSSENKLIESAIFNIKEIPNLSLISSVVDLSAAEIELSQLERGKFVLKSALEKIR CEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH DNYEYIIIDCPPSLGLLTINALTAANSIIVPLQCEFFALEGLSHLVKTVELIKRNNLNPF CCCCEEEEECCCCCCEEEEEHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCE LAIEGIVLTMYDRRNKLSEQIKNDICQYLNDKVYKTIIPLYETVIPRNVRLSEAPSHGKP EEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCC AIVYDLKCPGAQAYISLAREILKKHASSCKEKKLVSEGVV EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9054507 [H]