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The map label for this gene is parB [H]

Identifier: 225630883

GI number: 225630883

Start: 1287548

End: 1288399

Strand: Direct

Name: parB [H]

Synonym: WRi_011970

Alternate gene names: 225630883

Gene position: 1287548-1288399 (Clockwise)

Preceding gene: 225630882

Following gene: 225630885

Centisome position: 89.05

GC content: 36.62

Gene sequence:

>852_bases
ATGAAGGATGATAGACGCCTCGGCAGAGGTCTTGCCGGTCTCATAGGCGATAATTATGATAATAAAGAAGATCGACAAGA
GCATTTGCCTATTTCATTACTGCACCCAAGCAAATTTCAACCGAGGAAACATTTTGACGAGGAGTCATTAAGAGAACTTG
CAAATTCGATAAAGAAAAGTGGCATTATACAGCCTATCGTGGTACGCAAAGATTCAAATGATGATGGTTATGAAATAATA
GCTGGAGAACGTCGTTGGCGAGCAAGCAAGATTGCAAATCTTGATAGTGCACCGGTTATCATAAAAGATCTGAGCGACAA
GGAATGCTTGGAAGTATCCATTATTGAAAACATACAAAGGCAAGATATTAATCCAATAGAGGAAGGTGAAGCTTACAGAA
AACTGATAGATGAGTTTTTCTATACACATGAGGAATTAGCTTCAGCTATAGGCAAAAGCCGCAGCCACATAACCAATATG
ATTCGGATGTTGTTGCTCCCTGATAGGGTGAAAACAATGATCAATGAGAAAAAATTGTCTATGGGTCATGCAAGAGCGTT
GATTAATGTTGAAAATGCGGAAAGTATTGCAGAAAAAATAGTTTCTCAGGGCTTAAGCGTTAGACAAACTGAAAAACTGA
TAAAGGACCTACATCAAAACAACAATCAAAAAGAGCAGAGATATACTAGAAATCAAGATATGACAGTAATAGAAGGCGCT
ATATCTTCTCAACTTGGTTTAAAGATCAAAATTAATGACAACAATTCTAAGGGTAAAGTTATGATACGGTATGATAATCC
AAATGAATTGGATTTGATATTGAAAATTTTGAATAGGAAACTTGAGGCATAG

Upstream 100 bases:

>100_bases
AATGTCCTGGTGCACAAGCGTATATAAGTTTGGCAAGGGAAATTTTAAAAAAGCACGCGAGCAGTTGTAAGGAGAAGAAG
CTAGTAAGCGAGGGCGTGGT

Downstream 100 bases:

>100_bases
CTAGTAGTTGGCTAGCAAAGCAACAAACCAATATCAACTGTTGGTGTCATGAAAGTAGCTGACACTGGAATCCAGGAATT
TTATTAAGTTGGTAAGCATA

Product: Chromosome partitioning protein, ParB family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MKDDRRLGRGLAGLIGDNYDNKEDRQEHLPISLLHPSKFQPRKHFDEESLRELANSIKKSGIIQPIVVRKDSNDDGYEII
AGERRWRASKIANLDSAPVIIKDLSDKECLEVSIIENIQRQDINPIEEGEAYRKLIDEFFYTHEELASAIGKSRSHITNM
IRMLLLPDRVKTMINEKKLSMGHARALINVENAESIAEKIVSQGLSVRQTEKLIKDLHQNNNQKEQRYTRNQDMTVIEGA
ISSQLGLKIKINDNNSKGKVMIRYDNPNELDLILKILNRKLEA

Sequences:

>Translated_283_residues
MKDDRRLGRGLAGLIGDNYDNKEDRQEHLPISLLHPSKFQPRKHFDEESLRELANSIKKSGIIQPIVVRKDSNDDGYEII
AGERRWRASKIANLDSAPVIIKDLSDKECLEVSIIENIQRQDINPIEEGEAYRKLIDEFFYTHEELASAIGKSRSHITNM
IRMLLLPDRVKTMINEKKLSMGHARALINVENAESIAEKIVSQGLSVRQTEKLIKDLHQNNNQKEQRYTRNQDMTVIEGA
ISSQLGLKIKINDNNSKGKVMIRYDNPNELDLILKILNRKLEA
>Mature_283_residues
MKDDRRLGRGLAGLIGDNYDNKEDRQEHLPISLLHPSKFQPRKHFDEESLRELANSIKKSGIIQPIVVRKDSNDDGYEII
AGERRWRASKIANLDSAPVIIKDLSDKECLEVSIIENIQRQDINPIEEGEAYRKLIDEFFYTHEELASAIGKSRSHITNM
IRMLLLPDRVKTMINEKKLSMGHARALINVENAESIAEKIVSQGLSVRQTEKLIKDLHQNNNQKEQRYTRNQDMTVIEGA
ISSQLGLKIKINDNNSKGKVMIRYDNPNELDLILKILNRKLEA

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 32473; Mature: 32473

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDDRRLGRGLAGLIGDNYDNKEDRQEHLPISLLHPSKFQPRKHFDEESLRELANSIKKS
CCCHHHHHHHHHHHHCCCCCCCHHHHHCCCEEEECCCCCCCHHCCCHHHHHHHHHHHHHC
GIIQPIVVRKDSNDDGYEIIAGERRWRASKIANLDSAPVIIKDLSDKECLEVSIIENIQR
CCCCEEEEEECCCCCCEEEEECCHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHH
QDINPIEEGEAYRKLIDEFFYTHEELASAIGKSRSHITNMIRMLLLPDRVKTMINEKKLS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH
MGHARALINVENAESIAEKIVSQGLSVRQTEKLIKDLHQNNNQKEQRYTRNQDMTVIEGA
HHHHHHEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHH
ISSQLGLKIKINDNNSKGKVMIRYDNPNELDLILKILNRKLEA
HHHCCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKDDRRLGRGLAGLIGDNYDNKEDRQEHLPISLLHPSKFQPRKHFDEESLRELANSIKKS
CCCHHHHHHHHHHHHCCCCCCCHHHHHCCCEEEECCCCCCCHHCCCHHHHHHHHHHHHHC
GIIQPIVVRKDSNDDGYEIIAGERRWRASKIANLDSAPVIIKDLSDKECLEVSIIENIQR
CCCCEEEEEECCCCCCEEEEECCHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHH
QDINPIEEGEAYRKLIDEFFYTHEELASAIGKSRSHITNMIRMLLLPDRVKTMINEKKLS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH
MGHARALINVENAESIAEKIVSQGLSVRQTEKLIKDLHQNNNQKEQRYTRNQDMTVIEGA
HHHHHHEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHH
ISSQLGLKIKINDNNSKGKVMIRYDNPNELDLILKILNRKLEA
HHHCCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]