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The map label for this gene is atoS [C]

Identifier: 225630881

GI number: 225630881

Start: 1284135

End: 1286618

Strand: Direct

Name: atoS [C]

Synonym: WRi_011950

Alternate gene names: 225630881

Gene position: 1284135-1286618 (Clockwise)

Preceding gene: 225630874

Following gene: 225630882

Centisome position: 88.81

GC content: 31.64

Gene sequence:

>2484_bases
ATGAATAAAAGATACATAGATAACAAAAAAGAGAACAGGGTTGACTTCATACTAAGAAATTATGGAATGTCAATTGTTGT
GATGGCAGTTATTATGCTCTTACCTCCAGTAGCAATATCGATACTCTACTTTTTTGATATATATAGTCAGCATATTAATA
TAGAGATTAATTTATTAGTTAGCATTCTAACAACTCTCTTTATGATGTATAATGTAAAACGCTACAGATACCTACTTAAC
ACTATAGAATTTCAAAATGCAATATTTGCAAATGCACTAAATCATAATACAGAATTTTGCCTTATTTTACATAAAGATGA
GGGTGTTATTTATGCTGATGCAAGGTTCTACGAAAGGTTTAAAGATCATATAATAGATGATGACATTACGTTAGGCAAGA
TTCTTGAAATAGGAGATGTTTCAGAAGCAGACAAAAAAGTACTCTATCATGCACTAAAAAATAACTCTTCTGTACAGGTA
TGCATTTCCTTAAACAAGAAGAATAGAGTATCTAACTTTCTTTTGCTCTTTGAGTCAATACCAGATAATCCCCAAATTGC
TATAAATAGTAATAAGATTTTAAATTTATCATTAGTGCCAATAGCAAGGCCAGATGGGTATTTTGTATTAAAAGCAACAC
AGATAAACAAGGAGCAGATATATGAAGAGTTAATAGAAAAACACAGCATAGGAACTTACATTGCAAATGCCAAAGGGGTG
ATTTTATCTGTAAATAAAAGATTTTTAGACATATTTGAACTAAAAAAACTGGAAAAAGGTAGCTCAATCAGTGATTTTAT
ATCTCAATCTAAATATAACAATACAACAACCGATAATGAAATTTTGTTTTTTACTATAAGTGGTATTCCATTCAAGGCTT
ATATGAGCACTGCTATATTTTGTGATAAATACAACCATAGCTATATATATGGCTTTATAACACCAACCGAATCAAATATT
GTTGATTATCAATTACACCCTTGTTTTGCAAATTCATCAATTGCTATTGCACAATGTGACATAAACGGCAACTTTGTAAA
GAAAAATACGGCACTAATAAAGCTTGCAGGGTCAGATAATAATTCAATCTTTACGTTGATATTGGATAGTTATCATGTGA
AAATACGTGAATATTTTTCGAGTAATAGAATAAATAATGCGTCTTTTGATGTACAGCTCAACGGCGGTAATAACATAAAA
ATATATTTCAATAAGTTTCTTCATAATAAAATGATCTTCATACTTTGTTATTTTATTGACAATACTGAACACAAAAACCT
AGAGATAAAGCTTGAGCATTATCAAAAGATGCAAGCTATAGGGCAGTTAGCAGGTGGTATTGCGCATGATTTCAACAATA
TATTGACTGGGATAATAGGATTTTGCGATTTGCTTTTACTCCAGCATTCAGCTGGTGATCCATCTTTTGGAGATATAATA
CAGATACAGCAAAATGCAAAGCGTGGATCAAATTTAGTAAGACAATTGCTTGCTTTCTCAAGAAGACAGACCTTGCAGCC
AAAAATTATTGATGTAAATAATACTATAGCTAATCTTTATGAAATGATAAAAAGATTAATAGGTGAAAATATAAAATTTA
ATATTTATTATGGTAGAGACTTGGGTGCTGTTAGGGCTGATCAAGGGCAATTAGAGCAAGTTATACTTAACTTAGCAGTC
AATGCTAGTGCTGCTATGGAAAAGGGCGGAGAATTAACTATACGAACCTTTAATCAAAAGATTGACTCATTAAATTCTAC
ACCTCAGGATATGTTTTCTCCAGACAAGGAAGCGATTGAACATGGAAATTATGTTGTGATTGAAGTAATTGATACTGGAT
GTGGAATGACGAGTGATACAACTGAAAAGATCTTTGATCCATTTTTTTCTACCAAAGATATTACCTCTGGTACAGGTCTT
GGCCTCTCTACTGTATATGGCATTATTAAACAAACTGAAGGATACATCTATGTTGCTAGCAAAGTAAATCATGGAACTAA
ATTTAGCATATTTTTGCCCATGGTTTACATATCAGATGAAAATGATAGAGAGGAAGATAGTGAAGAAACAGAAAGACCGG
TAGTAAGTGAAATTAAAGGTAATGGTATAATTTTATTAATCGAAGATGAAGATTCAGTAAGGGAATTCATCTCTAAAGAA
CTCAAAAGAAAAGGATTTGATGTAATAGAAGCAAGCATAGGCAGCGAGGCGCTAGAAATAATCAGTAAAAAAAGTCAACA
TATAGATCTTATAATCACTGATGTAATCATGCCAGAGGTGAGCGGCCCAGAAATAGTTAAAGAAGCATTGATCCATAGGC
CAAATATCAACGTTATTTTTATTTCTGGGTATGCAGAAGATGCTTTTTTAAAGAGTGATGACATCAATATAGAAGATTTT
CACTTTTTGCCAAAACCATTCACTCTGAATGAATTAGGAAACAAGGTTCAAAGTGTGTTACACAAAGCAAAAAAGACAGT
CTAA

Upstream 100 bases:

>100_bases
TTTGGATGATAATTATCTATCAAAGACGTTAATAAATCTATAATAATTAAATCAATATAATAGAACATTTTCGTATGTAC
AACAATGCCAAGTAACAATA

Downstream 100 bases:

>100_bases
TTTTAGTGTGGTTAACAACAAAAAAATTTTCTAATGCAAAAGTTTCTTGCATATATACAATAGAATTATTTTATACATAA
GATAAAAGGCGTGAGCAAGA

Product: sensor histidine kinase/response regulator

Products: NA

Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]

Number of amino acids: Translated: 827; Mature: 827

Protein sequence:

>827_residues
MNKRYIDNKKENRVDFILRNYGMSIVVMAVIMLLPPVAISILYFFDIYSQHINIEINLLVSILTTLFMMYNVKRYRYLLN
TIEFQNAIFANALNHNTEFCLILHKDEGVIYADARFYERFKDHIIDDDITLGKILEIGDVSEADKKVLYHALKNNSSVQV
CISLNKKNRVSNFLLLFESIPDNPQIAINSNKILNLSLVPIARPDGYFVLKATQINKEQIYEELIEKHSIGTYIANAKGV
ILSVNKRFLDIFELKKLEKGSSISDFISQSKYNNTTTDNEILFFTISGIPFKAYMSTAIFCDKYNHSYIYGFITPTESNI
VDYQLHPCFANSSIAIAQCDINGNFVKKNTALIKLAGSDNNSIFTLILDSYHVKIREYFSSNRINNASFDVQLNGGNNIK
IYFNKFLHNKMIFILCYFIDNTEHKNLEIKLEHYQKMQAIGQLAGGIAHDFNNILTGIIGFCDLLLLQHSAGDPSFGDII
QIQQNAKRGSNLVRQLLAFSRRQTLQPKIIDVNNTIANLYEMIKRLIGENIKFNIYYGRDLGAVRADQGQLEQVILNLAV
NASAAMEKGGELTIRTFNQKIDSLNSTPQDMFSPDKEAIEHGNYVVIEVIDTGCGMTSDTTEKIFDPFFSTKDITSGTGL
GLSTVYGIIKQTEGYIYVASKVNHGTKFSIFLPMVYISDENDREEDSEETERPVVSEIKGNGIILLIEDEDSVREFISKE
LKRKGFDVIEASIGSEALEIISKKSQHIDLIITDVIMPEVSGPEIVKEALIHRPNINVIFISGYAEDAFLKSDDINIEDF
HFLPKPFTLNELGNKVQSVLHKAKKTV

Sequences:

>Translated_827_residues
MNKRYIDNKKENRVDFILRNYGMSIVVMAVIMLLPPVAISILYFFDIYSQHINIEINLLVSILTTLFMMYNVKRYRYLLN
TIEFQNAIFANALNHNTEFCLILHKDEGVIYADARFYERFKDHIIDDDITLGKILEIGDVSEADKKVLYHALKNNSSVQV
CISLNKKNRVSNFLLLFESIPDNPQIAINSNKILNLSLVPIARPDGYFVLKATQINKEQIYEELIEKHSIGTYIANAKGV
ILSVNKRFLDIFELKKLEKGSSISDFISQSKYNNTTTDNEILFFTISGIPFKAYMSTAIFCDKYNHSYIYGFITPTESNI
VDYQLHPCFANSSIAIAQCDINGNFVKKNTALIKLAGSDNNSIFTLILDSYHVKIREYFSSNRINNASFDVQLNGGNNIK
IYFNKFLHNKMIFILCYFIDNTEHKNLEIKLEHYQKMQAIGQLAGGIAHDFNNILTGIIGFCDLLLLQHSAGDPSFGDII
QIQQNAKRGSNLVRQLLAFSRRQTLQPKIIDVNNTIANLYEMIKRLIGENIKFNIYYGRDLGAVRADQGQLEQVILNLAV
NASAAMEKGGELTIRTFNQKIDSLNSTPQDMFSPDKEAIEHGNYVVIEVIDTGCGMTSDTTEKIFDPFFSTKDITSGTGL
GLSTVYGIIKQTEGYIYVASKVNHGTKFSIFLPMVYISDENDREEDSEETERPVVSEIKGNGIILLIEDEDSVREFISKE
LKRKGFDVIEASIGSEALEIISKKSQHIDLIITDVIMPEVSGPEIVKEALIHRPNINVIFISGYAEDAFLKSDDINIEDF
HFLPKPFTLNELGNKVQSVLHKAKKTV
>Mature_827_residues
MNKRYIDNKKENRVDFILRNYGMSIVVMAVIMLLPPVAISILYFFDIYSQHINIEINLLVSILTTLFMMYNVKRYRYLLN
TIEFQNAIFANALNHNTEFCLILHKDEGVIYADARFYERFKDHIIDDDITLGKILEIGDVSEADKKVLYHALKNNSSVQV
CISLNKKNRVSNFLLLFESIPDNPQIAINSNKILNLSLVPIARPDGYFVLKATQINKEQIYEELIEKHSIGTYIANAKGV
ILSVNKRFLDIFELKKLEKGSSISDFISQSKYNNTTTDNEILFFTISGIPFKAYMSTAIFCDKYNHSYIYGFITPTESNI
VDYQLHPCFANSSIAIAQCDINGNFVKKNTALIKLAGSDNNSIFTLILDSYHVKIREYFSSNRINNASFDVQLNGGNNIK
IYFNKFLHNKMIFILCYFIDNTEHKNLEIKLEHYQKMQAIGQLAGGIAHDFNNILTGIIGFCDLLLLQHSAGDPSFGDII
QIQQNAKRGSNLVRQLLAFSRRQTLQPKIIDVNNTIANLYEMIKRLIGENIKFNIYYGRDLGAVRADQGQLEQVILNLAV
NASAAMEKGGELTIRTFNQKIDSLNSTPQDMFSPDKEAIEHGNYVVIEVIDTGCGMTSDTTEKIFDPFFSTKDITSGTGL
GLSTVYGIIKQTEGYIYVASKVNHGTKFSIFLPMVYISDENDREEDSEETERPVVSEIKGNGIILLIEDEDSVREFISKE
LKRKGFDVIEASIGSEALEIISKKSQHIDLIITDVIMPEVSGPEIVKEALIHRPNINVIFISGYAEDAFLKSDDINIEDF
HFLPKPFTLNELGNKVQSVLHKAKKTV

Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=269, Percent_Identity=30.1115241635688, Blast_Score=117, Evalue=3e-27,
Organism=Escherichia coli, GI1790436, Length=249, Percent_Identity=28.9156626506024, Blast_Score=104, Evalue=2e-23,
Organism=Escherichia coli, GI1790300, Length=288, Percent_Identity=28.8194444444444, Blast_Score=84, Evalue=4e-17,
Organism=Escherichia coli, GI1788713, Length=373, Percent_Identity=25.201072386059, Blast_Score=79, Evalue=9e-16,
Organism=Escherichia coli, GI48994928, Length=384, Percent_Identity=22.9166666666667, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI87081816, Length=410, Percent_Identity=21.7073170731707, Blast_Score=69, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011006
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 93717; Mature: 93717

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKRYIDNKKENRVDFILRNYGMSIVVMAVIMLLPPVAISILYFFDIYSQHINIEINLLV
CCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHH
SILTTLFMMYNVKRYRYLLNTIEFQNAIFANALNHNTEFCLILHKDEGVIYADARFYERF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEECHHHHHHH
KDHIIDDDITLGKILEIGDVSEADKKVLYHALKNNSSVQVCISLNKKNRVSNFLLLFESI
HHHCCCCCCCHHHEEECCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHEEEEEECC
PDNPQIAINSNKILNLSLVPIARPDGYFVLKATQINKEQIYEELIEKHSIGTYIANAKGV
CCCCEEEECCCEEEEEEEEEEECCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEECCCEE
ILSVNKRFLDIFELKKLEKGSSISDFISQSKYNNTTTDNEILFFTISGIPFKAYMSTAIF
EEECCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHEEE
CDKYNHSYIYGFITPTESNIVDYQLHPCFANSSIAIAQCDINGNFVKKNTALIKLAGSDN
EECCCCEEEEEEECCCCCCEEEEEECCEECCCCEEEEEECCCCCEEECCEEEEEEECCCC
NSIFTLILDSYHVKIREYFSSNRINNASFDVQLNGGNNIKIYFNKFLHNKMIFILCYFID
CCEEEEEEECHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEEHHHHCCEEEEEEEEEC
NTEHKNLEIKLEHYQKMQAIGQLAGGIAHDFNNILTGIIGFCDLLLLQHSAGDPSFGDII
CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
QIQQNAKRGSNLVRQLLAFSRRQTLQPKIIDVNNTIANLYEMIKRLIGENIKFNIYYGRD
EEHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHCCCEEEEEEECCC
LGAVRADQGQLEQVILNLAVNASAAMEKGGELTIRTFNQKIDSLNSTPQDMFSPDKEAIE
CCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCEEEEEHHHHHHHCCCCCHHHCCCCHHHHH
HGNYVVIEVIDTGCGMTSDTTEKIFDPFFSTKDITSGTGLGLSTVYGIIKQTEGYIYVAS
CCCEEEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEE
KVNHGTKFSIFLPMVYISDENDREEDSEETERPVVSEIKGNGIILLIEDEDSVREFISKE
ECCCCCEEEEEEEEEEEECCCCCCCCHHHHCCCHHHHCCCCEEEEEEECCHHHHHHHHHH
LKRKGFDVIEASIGSEALEIISKKSQHIDLIITDVIMPEVSGPEIVKEALIHRPNINVIF
HHHCCCHHHHHHCCHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCCCCEEE
ISGYAEDAFLKSDDINIEDFHFLPKPFTLNELGNKVQSVLHKAKKTV
EECCCCCCEEECCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNKRYIDNKKENRVDFILRNYGMSIVVMAVIMLLPPVAISILYFFDIYSQHINIEINLLV
CCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHH
SILTTLFMMYNVKRYRYLLNTIEFQNAIFANALNHNTEFCLILHKDEGVIYADARFYERF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEECHHHHHHH
KDHIIDDDITLGKILEIGDVSEADKKVLYHALKNNSSVQVCISLNKKNRVSNFLLLFESI
HHHCCCCCCCHHHEEECCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHEEEEEECC
PDNPQIAINSNKILNLSLVPIARPDGYFVLKATQINKEQIYEELIEKHSIGTYIANAKGV
CCCCEEEECCCEEEEEEEEEEECCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEECCCEE
ILSVNKRFLDIFELKKLEKGSSISDFISQSKYNNTTTDNEILFFTISGIPFKAYMSTAIF
EEECCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHEEE
CDKYNHSYIYGFITPTESNIVDYQLHPCFANSSIAIAQCDINGNFVKKNTALIKLAGSDN
EECCCCEEEEEEECCCCCCEEEEEECCEECCCCEEEEEECCCCCEEECCEEEEEEECCCC
NSIFTLILDSYHVKIREYFSSNRINNASFDVQLNGGNNIKIYFNKFLHNKMIFILCYFID
CCEEEEEEECHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEEHHHHCCEEEEEEEEEC
NTEHKNLEIKLEHYQKMQAIGQLAGGIAHDFNNILTGIIGFCDLLLLQHSAGDPSFGDII
CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
QIQQNAKRGSNLVRQLLAFSRRQTLQPKIIDVNNTIANLYEMIKRLIGENIKFNIYYGRD
EEHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHCCCEEEEEEECCC
LGAVRADQGQLEQVILNLAVNASAAMEKGGELTIRTFNQKIDSLNSTPQDMFSPDKEAIE
CCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCEEEEEHHHHHHHCCCCCHHHCCCCHHHHH
HGNYVVIEVIDTGCGMTSDTTEKIFDPFFSTKDITSGTGLGLSTVYGIIKQTEGYIYVAS
CCCEEEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEE
KVNHGTKFSIFLPMVYISDENDREEDSEETERPVVSEIKGNGIILLIEDEDSVREFISKE
ECCCCCEEEEEEEEEEEECCCCCCCCHHHHCCCHHHHCCCCEEEEEEECCHHHHHHHHHH
LKRKGFDVIEASIGSEALEIISKKSQHIDLIITDVIMPEVSGPEIVKEALIHRPNINVIF
HHHCCCHHHHHHCCHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCCCCEEE
ISGYAEDAFLKSDDINIEDFHFLPKPFTLNELGNKVQSVLHKAKKTV
EECCCCCCEEECCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA