| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630871
Identifier: 225630871
GI number: 225630871
Start: 1275953
End: 1276342
Strand: Reverse
Name: 225630871
Synonym: WRi_011830
Alternate gene names: NA
Gene position: 1276342-1275953 (Counterclockwise)
Preceding gene: 225630872
Following gene: 225630870
Centisome position: 88.27
GC content: 37.95
Gene sequence:
>390_bases ATGATAAAGTTTCGCCCTCATCATTTCATGTGCACCCTCGCGTTTCGGGGATATGGGTATTCTCAGGGTTTTGTAGAAAA TTATAGGAAGATAGCAAGTGAAGTGGTTAGTACTCAAATCGAAGTAGTTGGTAACCTTGATAGTATCTGTAGTGCTTGTC CAAATCAGACTAAACAAGGTAAATGCACCACACAAGCTAAAGTTTTAGAGCTAGATAGAAGGCATATGGAAATTTTAGGA GTAAAAATTGGCGAGACTTTAACTTGGAATGAGGCAGTAAAAAAGATTAGAGAGAAAATGTCTTTAGAGAAATTCGAGTA CGCATGTGAGGGGTGCAATTGGCAGCCATATGGAATATGTAAAAATGCCCTTTTAAATCTACAAAGGTAG
Upstream 100 bases:
>100_bases TGGGTCTGGAACAAGCAATAATGGTGGGTGTTTTACCATTTATCCTTCCTGGTTTGGTAAAAATTTTTCTACTTGTAGCG GCTTTGCAATATTTGAAAAA
Downstream 100 bases:
>100_bases TTGACAAAATGTTAAGATAAATCGAAGCATTTTTGTGGAAATAAAGCGAAATATGGAAGACAAAAGATAAATGCATTCTG AAAGGCTACACAGCATGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MIKFRPHHFMCTLAFRGYGYSQGFVENYRKIASEVVSTQIEVVGNLDSICSACPNQTKQGKCTTQAKVLELDRRHMEILG VKIGETLTWNEAVKKIREKMSLEKFEYACEGCNWQPYGICKNALLNLQR
Sequences:
>Translated_129_residues MIKFRPHHFMCTLAFRGYGYSQGFVENYRKIASEVVSTQIEVVGNLDSICSACPNQTKQGKCTTQAKVLELDRRHMEILG VKIGETLTWNEAVKKIREKMSLEKFEYACEGCNWQPYGICKNALLNLQR >Mature_129_residues MIKFRPHHFMCTLAFRGYGYSQGFVENYRKIASEVVSTQIEVVGNLDSICSACPNQTKQGKCTTQAKVLELDRRHMEILG VKIGETLTWNEAVKKIREKMSLEKFEYACEGCNWQPYGICKNALLNLQR
Specific function: Unknown
COG id: COG3543
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14812; Mature: 14812
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKFRPHHFMCTLAFRGYGYSQGFVENYRKIASEVVSTQIEVVGNLDSICSACPNQTKQG CCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCC KCTTQAKVLELDRRHMEILGVKIGETLTWNEAVKKIREKMSLEKFEYACEGCNWQPYGIC CCHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH KNALLNLQR HHHHHCCCC >Mature Secondary Structure MIKFRPHHFMCTLAFRGYGYSQGFVENYRKIASEVVSTQIEVVGNLDSICSACPNQTKQG CCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCC KCTTQAKVLELDRRHMEILGVKIGETLTWNEAVKKIREKMSLEKFEYACEGCNWQPYGIC CCHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH KNALLNLQR HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA