Click here to switch to the map view.

The map label for this gene is yhgI [C]

Identifier: 225630807

GI number: 225630807

Start: 1200213

End: 1200797

Strand: Direct

Name: yhgI [C]

Synonym: WRi_011110

Alternate gene names: 225630807

Gene position: 1200213-1200797 (Clockwise)

Preceding gene: 225630805

Following gene: 225630808

Centisome position: 83.01

GC content: 32.82

Gene sequence:

>585_bases
ATGGTAAATAACATGTTCATCCAGATTGAAGAAACACCAAACCCAAATACGCTAAAATTCCTTCCTGGATTTGAAATTTT
AAACGAAGGAGAAACGACTGATTTTTCAAATGCAAATGAGATAAAAAATTCTAAACTAGCAGCAAATCTTTTTCAAATAG
AACATGTGGTAAGAGTGTTTTTTGGTCATGATTTTATTTCAGTAACAAAATTGGGTGGAATTAATTGGGATACATTAAAA
GTAGAAATTTTAACTACAATCATGGATCACTTTACTTCAGGTGGAAAAGCACTAGATAAAGAAGGAGTAAATGATAATAA
TATACCGGATGAAGAATTTTTTGATAAAAATGATATAGAAATTGTAAATAGAATAAAAGAATTAATGGAAAGTTATATCA
AACCTGCAGTTGCTCAAGATGGTGGCGATATCAAATTTCGTGGCTATAAAGACGGGATAGTTTATGTTGAGTTACAAGGA
GCTTGCTCTGGATGCCCAAGTGCTGCAATTACTTTAAAGCAAGGAGTGCAAAATATGCTGAGCTACCACATACCAGAGAT
TGCAGGTATAGAGACCACACTATGA

Upstream 100 bases:

>100_bases
GACAAATGTAATTACTATGAATACTAAAAAAAGAAAAAAGATGAATGACATGTATATTTTTTTATCATTTTATGATTAAA
TAGTAACAATTATAATTGTC

Downstream 100 bases:

>100_bases
CTAATCAAACGGTTAGAGGAACAAAAGATTTCCTGTTTGATGAATGGTACAAGTTTAAACACATAGAGCAAACAGCAAGC
AGAATCTCAAATCTATATGG

Product: NifU domain protein

Products: NA

Alternate protein names: NifU Domain Protein; NifU Domain-Containing Protein; Nitrogen-Fixing NifU Domain Protein; Nitrogen-Fixing NifU-Like; Nitrogen Fixation Protein; NifU Related Protein; NifU-Like Protein; NifU-Like Domain Protein; NifU-Like Domain-Containing Protein; NifU Protein; Nitrogen-Fixing NifU-Like Protein; Scaffold Protein Nfu/Nifu; NifU Family Protein; Thioredoxin-Like Protein; Nitrogen-Fixing NifU; NifU Iron-Sulphur Cluster Scaffold Protein; Nif System Fes Cluster Assembly Nifu Family Protein; Thioredoxin-Related Protein; Thioredoxin-Like Domain Protein; Scaffold Protein Nfu/NifU N Terminal Domain Protein; Nitrogen-Fixing Nifu Domain Protein; Nitrogen-Fixing Protein NifU; Nitrogen-Fixing NifU Domain-Containing Protein; Nitrogen Fixing Thioredoxin-Like Protein NifU; Nitrogen-Fixing Protein; NFU1 Iron-Sulfur Cluster Scaffold-Like Protein; Fe-S Cluster Assembly Protein NFU; Nifu Protein; NifU Domain Containing Protein; HIRA-Interacting; Nitrogen-Fixing NifU C-Terminal; Scaffold Protein Nfu/NifU-Like Protein; Scaffold Protein Nfu/NifU N Terminal; NitrogeN-Fixing Nifu Domain Protein; Thioredoxin

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MVNNMFIQIEETPNPNTLKFLPGFEILNEGETTDFSNANEIKNSKLAANLFQIEHVVRVFFGHDFISVTKLGGINWDTLK
VEILTTIMDHFTSGGKALDKEGVNDNNIPDEEFFDKNDIEIVNRIKELMESYIKPAVAQDGGDIKFRGYKDGIVYVELQG
ACSGCPSAAITLKQGVQNMLSYHIPEIAGIETTL

Sequences:

>Translated_194_residues
MVNNMFIQIEETPNPNTLKFLPGFEILNEGETTDFSNANEIKNSKLAANLFQIEHVVRVFFGHDFISVTKLGGINWDTLK
VEILTTIMDHFTSGGKALDKEGVNDNNIPDEEFFDKNDIEIVNRIKELMESYIKPAVAQDGGDIKFRGYKDGIVYVELQG
ACSGCPSAAITLKQGVQNMLSYHIPEIAGIETTL
>Mature_194_residues
MVNNMFIQIEETPNPNTLKFLPGFEILNEGETTDFSNANEIKNSKLAANLFQIEHVVRVFFGHDFISVTKLGGINWDTLK
VEILTTIMDHFTSGGKALDKEGVNDNNIPDEEFFDKNDIEIVNRIKELMESYIKPAVAQDGGDIKFRGYKDGIVYVELQG
ACSGCPSAAITLKQGVQNMLSYHIPEIAGIETTL

Specific function: Unknown

COG id: COG0694

COG function: function code O; Thioredoxin-like proteins and domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI50593025, Length=194, Percent_Identity=47.4226804123711, Blast_Score=180, Evalue=9e-46,
Organism=Homo sapiens, GI50593021, Length=194, Percent_Identity=47.4226804123711, Blast_Score=180, Evalue=9e-46,
Organism=Homo sapiens, GI50593023, Length=107, Percent_Identity=44.8598130841121, Blast_Score=104, Evalue=6e-23,
Organism=Homo sapiens, GI50593019, Length=107, Percent_Identity=44.8598130841121, Blast_Score=104, Evalue=6e-23,
Organism=Caenorhabditis elegans, GI17541876, Length=190, Percent_Identity=42.1052631578947, Blast_Score=176, Evalue=8e-45,
Organism=Saccharomyces cerevisiae, GI6322811, Length=197, Percent_Identity=33.502538071066, Blast_Score=110, Evalue=1e-25,
Organism=Drosophila melanogaster, GI45551492, Length=189, Percent_Identity=47.0899470899471, Blast_Score=183, Evalue=5e-47,
Organism=Drosophila melanogaster, GI24643765, Length=189, Percent_Identity=47.0899470899471, Blast_Score=183, Evalue=5e-47,
Organism=Drosophila melanogaster, GI45556188, Length=189, Percent_Identity=47.0899470899471, Blast_Score=183, Evalue=5e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21590; Mature: 21590

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNNMFIQIEETPNPNTLKFLPGFEILNEGETTDFSNANEIKNSKLAANLFQIEHVVRVF
CCCCEEEEEECCCCCCEEEECCCHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHH
FGHDFISVTKLGGINWDTLKVEILTTIMDHFTSGGKALDKEGVNDNNIPDEEFFDKNDIE
HCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCHHH
IVNRIKELMESYIKPAVAQDGGDIKFRGYKDGIVYVELQGACSGCPSAAITLKQGVQNML
HHHHHHHHHHHHHCCHHCCCCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHH
SYHIPEIAGIETTL
HHCCCCCCCCCCCC
>Mature Secondary Structure
MVNNMFIQIEETPNPNTLKFLPGFEILNEGETTDFSNANEIKNSKLAANLFQIEHVVRVF
CCCCEEEEEECCCCCCEEEECCCHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHH
FGHDFISVTKLGGINWDTLKVEILTTIMDHFTSGGKALDKEGVNDNNIPDEEFFDKNDIE
HCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCHHH
IVNRIKELMESYIKPAVAQDGGDIKFRGYKDGIVYVELQGACSGCPSAAITLKQGVQNML
HHHHHHHHHHHHHCCHHCCCCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHH
SYHIPEIAGIETTL
HHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA