| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630789
Identifier: 225630789
GI number: 225630789
Start: 1183567
End: 1184253
Strand: Direct
Name: 225630789
Synonym: WRi_010920
Alternate gene names: NA
Gene position: 1183567-1184253 (Clockwise)
Preceding gene: 225630788
Following gene: 225630791
Centisome position: 81.86
GC content: 28.68
Gene sequence:
>687_bases ATGATTTTTAGACTATTGCTTTTATCAATTTTTATAAGTGTTAATTCTTATGCAGTTGTTAACCAACATATTCAAAAAGA AACTAATGAAATAACATCAAAGGAGTTACTATCACTATTACCCGATGATAAATTATTAGGAAATCCAAAAGCACCAATTC TAATGATAGAATATGCTTCATTAACTTGCTATCACTGCTCTCTTTTTCATAAGAATGTTTTTCCTAAAATAAAAGAGAAA TATATAGACACAGGTAAGATGTTATATATATTTCGTCATTTTCCTTTGGATTACAGAGGGCTAAAGGCTGCAATGCTAAG TCATTGCTACGAAAAACAAGAAGACTACTTTAATTTTAACAAAGCTGTTTTTAACTCAATAGATTCGTGGAATTACTACA ATTTAAGTGATTTGACTTTACTACAAAGAATTGCTGCACTAAGCAACTTAAAGCAAGATGCATTTAACCAATGCATTAAT GATAAGAAAATTATGGATAAAATCATAAATGATAAATCACTGGCAATTAATAAACTTGGTATCACAGCTACCCCAATATT TTTCATCAAGCTTAACGATGGTAAGTCATATATAGAGCATAATAAAGTTAAACATGAAGGGTATAAAGAGCTGAAATACC TCACTGATGTAATAGATAAATTATATGGAAAAGCTATAGTGAAGTAA
Upstream 100 bases:
>100_bases CATTTAAAGACAGGGCTGAAAGCCTTGCTAAACAAAAGTTACCTTGACATTATTTATATAAATATATAATTTTTTTAGTA AGTTAAGTATTTATATCGTA
Downstream 100 bases:
>100_bases TACCACTGTAGCTTACCATATAAAAGACTCTATGCTGAGTCATTGTTTTTTACGACTGTTTGTTGTTTTTTACGCTCAAA TTCTCTTTTTTTACTGTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MIFRLLLLSIFISVNSYAVVNQHIQKETNEITSKELLSLLPDDKLLGNPKAPILMIEYASLTCYHCSLFHKNVFPKIKEK YIDTGKMLYIFRHFPLDYRGLKAAMLSHCYEKQEDYFNFNKAVFNSIDSWNYYNLSDLTLLQRIAALSNLKQDAFNQCIN DKKIMDKIINDKSLAINKLGITATPIFFIKLNDGKSYIEHNKVKHEGYKELKYLTDVIDKLYGKAIVK
Sequences:
>Translated_228_residues MIFRLLLLSIFISVNSYAVVNQHIQKETNEITSKELLSLLPDDKLLGNPKAPILMIEYASLTCYHCSLFHKNVFPKIKEK YIDTGKMLYIFRHFPLDYRGLKAAMLSHCYEKQEDYFNFNKAVFNSIDSWNYYNLSDLTLLQRIAALSNLKQDAFNQCIN DKKIMDKIINDKSLAINKLGITATPIFFIKLNDGKSYIEHNKVKHEGYKELKYLTDVIDKLYGKAIVK >Mature_228_residues MIFRLLLLSIFISVNSYAVVNQHIQKETNEITSKELLSLLPDDKLLGNPKAPILMIEYASLTCYHCSLFHKNVFPKIKEK YIDTGKMLYIFRHFPLDYRGLKAAMLSHCYEKQEDYFNFNKAVFNSIDSWNYYNLSDLTLLQRIAALSNLKQDAFNQCIN DKKIMDKIINDKSLAINKLGITATPIFFIKLNDGKSYIEHNKVKHEGYKELKYLTDVIDKLYGKAIVK
Specific function: May be required for disulfide bond formation in some proteins [H]
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR012335 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26520; Mature: 26520
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: PS01109 RIBOSOMAL_L10
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFRLLLLSIFISVNSYAVVNQHIQKETNEITSKELLSLLPDDKLLGNPKAPILMIEYAS CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECH LTCYHCSLFHKNVFPKIKEKYIDTGKMLYIFRHFPLDYRGLKAAMLSHCYEKQEDYFNFN HHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH KAVFNSIDSWNYYNLSDLTLLQRIAALSNLKQDAFNQCINDKKIMDKIINDKSLAINKLG HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHEEEECC ITATPIFFIKLNDGKSYIEHNKVKHEGYKELKYLTDVIDKLYGKAIVK CEECEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIFRLLLLSIFISVNSYAVVNQHIQKETNEITSKELLSLLPDDKLLGNPKAPILMIEYAS CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECH LTCYHCSLFHKNVFPKIKEKYIDTGKMLYIFRHFPLDYRGLKAAMLSHCYEKQEDYFNFN HHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH KAVFNSIDSWNYYNLSDLTLLQRIAALSNLKQDAFNQCINDKKIMDKIINDKSLAINKLG HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHEEEECC ITATPIFFIKLNDGKSYIEHNKVKHEGYKELKYLTDVIDKLYGKAIVK CEECEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA