| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630604
Identifier: 225630604
GI number: 225630604
Start: 949801
End: 950445
Strand: Direct
Name: 225630604
Synonym: WRi_008750
Alternate gene names: NA
Gene position: 949801-950445 (Clockwise)
Preceding gene: 225630603
Following gene: 225630605
Centisome position: 65.69
GC content: 35.35
Gene sequence:
>645_bases ATGTCAGTATATCGATACTTTAGAAGGTACGTTGAATATGGAGTTGTACCTGCTAAGAAAGCAGAAGATAACACACTAGT TCCAGAAAATAGTTTCTATAAGTCCGTACATTACGTTGATAATGTGCTAGGATCTGTGAAAGATGTAATTTGTGGAGTTG AGAGTAAAGACGATTATAACAAGTATTATAAAAACAATGATAAATATGAATACGTGGGCCACAGAGCAGAGAGAGTGTAT TCATTGTGTACACTGGGTGCTGTTTTAGCAGCCAACATAATATTGCAACCTTTACTTTTGATAGTGGCATGTTTGTCATA CTTTCCAGTCAAGTTATTGTCAAAAATAACAGGGGACTATTGTTTTAAAACGGATACAAAATCATTCGTTAATTATTCAA ACATATTTTTAGAAATGGGGCAAGATTGTGCTAATGCAGTAGCTAGAGTATTTAACAAGATTGTAAGTTATGCTTGCGCT GCTATCATTTGGGCTGCCGCGTCAATCATAACGCCACTTGTGTGGGCTTGTGACAAAGTGCAAAGTAAGTTGAGTGAAGT ACAGAAGCCAGAAAAACATCAATTTTTATCTAAGGATAATTCAAAGACTACTTCAGTCAATGGTATACCACAAACTGAGT TATAA
Upstream 100 bases:
>100_bases TCCAGAAAGTGTTACAGGCAGGTATCTTAAAACGTATTTATTATAAACTATTTCTTAATTATATTAGGCTAGGTTGCATA TTTATGATTTGGAGATAAGA
Downstream 100 bases:
>100_bases GTTCTGCTTTTCAGCAGCATGAACTATATTGAAATGGAATAAAAAGTGAAAGAGTGTAAGCTTAAGTTACTTTAGCTATA CTATATAAATTATTTTATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MSVYRYFRRYVEYGVVPAKKAEDNTLVPENSFYKSVHYVDNVLGSVKDVICGVESKDDYNKYYKNNDKYEYVGHRAERVY SLCTLGAVLAANIILQPLLLIVACLSYFPVKLLSKITGDYCFKTDTKSFVNYSNIFLEMGQDCANAVARVFNKIVSYACA AIIWAAASIITPLVWACDKVQSKLSEVQKPEKHQFLSKDNSKTTSVNGIPQTEL
Sequences:
>Translated_214_residues MSVYRYFRRYVEYGVVPAKKAEDNTLVPENSFYKSVHYVDNVLGSVKDVICGVESKDDYNKYYKNNDKYEYVGHRAERVY SLCTLGAVLAANIILQPLLLIVACLSYFPVKLLSKITGDYCFKTDTKSFVNYSNIFLEMGQDCANAVARVFNKIVSYACA AIIWAAASIITPLVWACDKVQSKLSEVQKPEKHQFLSKDNSKTTSVNGIPQTEL >Mature_213_residues SVYRYFRRYVEYGVVPAKKAEDNTLVPENSFYKSVHYVDNVLGSVKDVICGVESKDDYNKYYKNNDKYEYVGHRAERVYS LCTLGAVLAANIILQPLLLIVACLSYFPVKLLSKITGDYCFKTDTKSFVNYSNIFLEMGQDCANAVARVFNKIVSYACAA IIWAAASIITPLVWACDKVQSKLSEVQKPEKHQFLSKDNSKTTSVNGIPQTEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24152; Mature: 24021
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVYRYFRRYVEYGVVPAKKAEDNTLVPENSFYKSVHYVDNVLGSVKDVICGVESKDDYN CCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH KYYKNNDKYEYVGHRAERVYSLCTLGAVLAANIILQPLLLIVACLSYFPVKLLSKITGDY HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH CFKTDTKSFVNYSNIFLEMGQDCANAVARVFNKIVSYACAAIIWAAASIITPLVWACDKV HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSKLSEVQKPEKHQFLSKDNSKTTSVNGIPQTEL HHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SVYRYFRRYVEYGVVPAKKAEDNTLVPENSFYKSVHYVDNVLGSVKDVICGVESKDDYN CHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH KYYKNNDKYEYVGHRAERVYSLCTLGAVLAANIILQPLLLIVACLSYFPVKLLSKITGDY HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH CFKTDTKSFVNYSNIFLEMGQDCANAVARVFNKIVSYACAAIIWAAASIITPLVWACDKV HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSKLSEVQKPEKHQFLSKDNSKTTSVNGIPQTEL HHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA