| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
Click here to switch to the map view.
The map label for this gene is 225630534
Identifier: 225630534
GI number: 225630534
Start: 847203
End: 847673
Strand: Reverse
Name: 225630534
Synonym: WRi_007870
Alternate gene names: NA
Gene position: 847673-847203 (Counterclockwise)
Preceding gene: 225630536
Following gene: 225630533
Centisome position: 58.63
GC content: 38.64
Gene sequence:
>471_bases ATGGCAGAAAACAACGACAATAATTCATTTACTAAGCGTTTCACAAACAGGACTCCTGGCGGTACAGGGGAAGGTTTTTC CAGTAAGTATTCGTCTCAAAACACCAAAGAACGGGCATTAGGGGAAAAAGGAAAAATTTCTGAATTAGCAGGCAAAAAAA CCGAATCCAAGGAAGCTTTTTCTGAAAGTGGCGGCATAAAAAGTAAAAGCAGAACTGTCAATGAAAGATCTTTTGCTGAT GCAACAAAAAGAAGTAGGTCAGATCTTATATACTTAGTCCGTGGTAAAGATCGTGGAAAATCAGCGTGGCATTATGTATT AGTTGATAAAGAGAAAAGAGAAATGTTTCTAGCAAAAAGCAGAACTGGCTCTATAGATGTTGCAGACTATGGAGAGATTT TGTATTCAGGATGGGGAGAGGATCCACCACAGGCAATAATTGATAAAGTCAATGAAGAGTTTGGGTTGTAG
Upstream 100 bases:
>100_bases TAATAATTACTATATTATTTTTCATTTATATTAATTTAATTAACATATGATAAAGTGTAGTAAAAGTTTGGATTCTACAA TCTAAAGTTTGGAGATTTTT
Downstream 100 bases:
>100_bases CAAATCTGCATAACAAATGGTAAGCTGCGTTGCATTACGTTTACAAAAACTAGCAGTTACTATATAAGATACAGTGCAAC AAAACTGATCTAGTTGTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MAENNDNNSFTKRFTNRTPGGTGEGFSSKYSSQNTKERALGEKGKISELAGKKTESKEAFSESGGIKSKSRTVNERSFAD ATKRSRSDLIYLVRGKDRGKSAWHYVLVDKEKREMFLAKSRTGSIDVADYGEILYSGWGEDPPQAIIDKVNEEFGL
Sequences:
>Translated_156_residues MAENNDNNSFTKRFTNRTPGGTGEGFSSKYSSQNTKERALGEKGKISELAGKKTESKEAFSESGGIKSKSRTVNERSFAD ATKRSRSDLIYLVRGKDRGKSAWHYVLVDKEKREMFLAKSRTGSIDVADYGEILYSGWGEDPPQAIIDKVNEEFGL >Mature_155_residues AENNDNNSFTKRFTNRTPGGTGEGFSSKYSSQNTKERALGEKGKISELAGKKTESKEAFSESGGIKSKSRTVNERSFADA TKRSRSDLIYLVRGKDRGKSAWHYVLVDKEKREMFLAKSRTGSIDVADYGEILYSGWGEDPPQAIIDKVNEEFGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17359; Mature: 17228
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAENNDNNSFTKRFTNRTPGGTGEGFSSKYSSQNTKERALGEKGKISELAGKKTESKEAF CCCCCCCCHHHHHHCCCCCCCCCCCCCCHHCCCCCHHHHCCCCCCHHHHHCCCCCHHHHH SESGGIKSKSRTVNERSFADATKRSRSDLIYLVRGKDRGKSAWHYVLVDKEKREMFLAKS HHCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEEECCHHHHHHHHC RTGSIDVADYGEILYSGWGEDPPQAIIDKVNEEFGL CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure AENNDNNSFTKRFTNRTPGGTGEGFSSKYSSQNTKERALGEKGKISELAGKKTESKEAF CCCCCCCHHHHHHCCCCCCCCCCCCCCHHCCCCCHHHHCCCCCCHHHHHCCCCCHHHHH SESGGIKSKSRTVNERSFADATKRSRSDLIYLVRGKDRGKSAWHYVLVDKEKREMFLAKS HHCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEEECCHHHHHHHHC RTGSIDVADYGEILYSGWGEDPPQAIIDKVNEEFGL CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA