Definition Wolbachia sp. wRi, complete genome.
Accession NC_012416
Length 1,445,873

Click here to switch to the map view.

The map label for this gene is 225630534

Identifier: 225630534

GI number: 225630534

Start: 847203

End: 847673

Strand: Reverse

Name: 225630534

Synonym: WRi_007870

Alternate gene names: NA

Gene position: 847673-847203 (Counterclockwise)

Preceding gene: 225630536

Following gene: 225630533

Centisome position: 58.63

GC content: 38.64

Gene sequence:

>471_bases
ATGGCAGAAAACAACGACAATAATTCATTTACTAAGCGTTTCACAAACAGGACTCCTGGCGGTACAGGGGAAGGTTTTTC
CAGTAAGTATTCGTCTCAAAACACCAAAGAACGGGCATTAGGGGAAAAAGGAAAAATTTCTGAATTAGCAGGCAAAAAAA
CCGAATCCAAGGAAGCTTTTTCTGAAAGTGGCGGCATAAAAAGTAAAAGCAGAACTGTCAATGAAAGATCTTTTGCTGAT
GCAACAAAAAGAAGTAGGTCAGATCTTATATACTTAGTCCGTGGTAAAGATCGTGGAAAATCAGCGTGGCATTATGTATT
AGTTGATAAAGAGAAAAGAGAAATGTTTCTAGCAAAAAGCAGAACTGGCTCTATAGATGTTGCAGACTATGGAGAGATTT
TGTATTCAGGATGGGGAGAGGATCCACCACAGGCAATAATTGATAAAGTCAATGAAGAGTTTGGGTTGTAG

Upstream 100 bases:

>100_bases
TAATAATTACTATATTATTTTTCATTTATATTAATTTAATTAACATATGATAAAGTGTAGTAAAAGTTTGGATTCTACAA
TCTAAAGTTTGGAGATTTTT

Downstream 100 bases:

>100_bases
CAAATCTGCATAACAAATGGTAAGCTGCGTTGCATTACGTTTACAAAAACTAGCAGTTACTATATAAGATACAGTGCAAC
AAAACTGATCTAGTTGTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MAENNDNNSFTKRFTNRTPGGTGEGFSSKYSSQNTKERALGEKGKISELAGKKTESKEAFSESGGIKSKSRTVNERSFAD
ATKRSRSDLIYLVRGKDRGKSAWHYVLVDKEKREMFLAKSRTGSIDVADYGEILYSGWGEDPPQAIIDKVNEEFGL

Sequences:

>Translated_156_residues
MAENNDNNSFTKRFTNRTPGGTGEGFSSKYSSQNTKERALGEKGKISELAGKKTESKEAFSESGGIKSKSRTVNERSFAD
ATKRSRSDLIYLVRGKDRGKSAWHYVLVDKEKREMFLAKSRTGSIDVADYGEILYSGWGEDPPQAIIDKVNEEFGL
>Mature_155_residues
AENNDNNSFTKRFTNRTPGGTGEGFSSKYSSQNTKERALGEKGKISELAGKKTESKEAFSESGGIKSKSRTVNERSFADA
TKRSRSDLIYLVRGKDRGKSAWHYVLVDKEKREMFLAKSRTGSIDVADYGEILYSGWGEDPPQAIIDKVNEEFGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17359; Mature: 17228

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAENNDNNSFTKRFTNRTPGGTGEGFSSKYSSQNTKERALGEKGKISELAGKKTESKEAF
CCCCCCCCHHHHHHCCCCCCCCCCCCCCHHCCCCCHHHHCCCCCCHHHHHCCCCCHHHHH
SESGGIKSKSRTVNERSFADATKRSRSDLIYLVRGKDRGKSAWHYVLVDKEKREMFLAKS
HHCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEEECCHHHHHHHHC
RTGSIDVADYGEILYSGWGEDPPQAIIDKVNEEFGL
CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
AENNDNNSFTKRFTNRTPGGTGEGFSSKYSSQNTKERALGEKGKISELAGKKTESKEAF
CCCCCCCHHHHHHCCCCCCCCCCCCCCHHCCCCCHHHHCCCCCCHHHHHCCCCCHHHHH
SESGGIKSKSRTVNERSFADATKRSRSDLIYLVRGKDRGKSAWHYVLVDKEKREMFLAKS
HHCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEEECCHHHHHHHHC
RTGSIDVADYGEILYSGWGEDPPQAIIDKVNEEFGL
CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA