| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630536
Identifier: 225630536
GI number: 225630536
Start: 848630
End: 849577
Strand: Reverse
Name: 225630536
Synonym: WRi_007890
Alternate gene names: NA
Gene position: 849577-848630 (Counterclockwise)
Preceding gene: 225630539
Following gene: 225630534
Centisome position: 58.76
GC content: 32.59
Gene sequence:
>948_bases ATGAGTAGCCCTATATCAGAAGAAAAGGAAAATCCAATAGTTACACTAAGAGCTCAAGCAGAAAAGTTTGATTTTAGTAA GTTAAGAGCTGATGAAAAGGATATCTCAGCGAACTCTGGTAAACAGATGTATGAGGATTTTGACAGAATGAATTTTGTTA TTAACAAGAAAAATATAGACACAATTTTGATTAAAGCACTAATAAATAGAGATAAAGAAGAATTTGACAAATTTTGGGAA AAGTATTGCGAAGGTCTGAAGGTTTCTAATGATAAAGAAACTGATCGGTATAAAGAGGAAGTTGAAAAATTCTACAATAT AGGTAAAGGATATACTAACCTATTAACGAAAGAAGAAGATGAAAATAAGAGTTATCGTGCGTTTGCAAAAGAAGTTTTTA AGGAAATATTTAAATATGCTGAAGCTCAAGTTCCAAGTGATTCTATTTTGGAAGAACTGGTTATCAATTGTAATCAAGCA GGGTACGTAGGTGCATTATACGCTGAAGATAAACCTCTTTTTCATGTAGCTATGGCATATGAGTTAGTTTTCGGTTCTAG TCATACAACACATATTAATTGTAGTGATCCAAGTCATGCAACAATCAGAATTGAAGAAAAAATTGCAGTTTGCACTTTAG CAAAATCAGAAGAAGAATTATGTAAATTGGATAGCTCGCTAGAATTCACACTTAAGTCTCAAGGTGATAAAAATGTAACA TATGAAGATGGTAAATTGTCACTTACTGTTCCTAAGAGACTGAAGGACTATAATATAGGTGATAAAAACTTGTTTGACGT TATAAAAGAGTGTTTTCAGAAATTTTGCGAGAGGCTTGGATTTTTTAAAATAAAAATAGAGCATGGTTTAGGCGATCCAC TAGAAGTAAGCGACCATCTGGAAAATATGGAACCCCCTATTCGTAGTAATGAGCACGGCCTGAATTAA
Upstream 100 bases:
>100_bases TATTTGCTGTCATAGAACTTGCGTTTATATAAAGTATTTTATTGACTTATTAATCATTTTCATGTATTATTATACAGTAG TCTATATTGAGGTACTAATA
Downstream 100 bases:
>100_bases AATATCTTGAGCTTGTTTGCACAATCAATCACTTCAGCATTTAGAAATTGTTTTTTAAACCAGGTATACTGACGTTTCGC GTAGTGTCTTGTGTTTGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MSSPISEEKENPIVTLRAQAEKFDFSKLRADEKDISANSGKQMYEDFDRMNFVINKKNIDTILIKALINRDKEEFDKFWE KYCEGLKVSNDKETDRYKEEVEKFYNIGKGYTNLLTKEEDENKSYRAFAKEVFKEIFKYAEAQVPSDSILEELVINCNQA GYVGALYAEDKPLFHVAMAYELVFGSSHTTHINCSDPSHATIRIEEKIAVCTLAKSEEELCKLDSSLEFTLKSQGDKNVT YEDGKLSLTVPKRLKDYNIGDKNLFDVIKECFQKFCERLGFFKIKIEHGLGDPLEVSDHLENMEPPIRSNEHGLN
Sequences:
>Translated_315_residues MSSPISEEKENPIVTLRAQAEKFDFSKLRADEKDISANSGKQMYEDFDRMNFVINKKNIDTILIKALINRDKEEFDKFWE KYCEGLKVSNDKETDRYKEEVEKFYNIGKGYTNLLTKEEDENKSYRAFAKEVFKEIFKYAEAQVPSDSILEELVINCNQA GYVGALYAEDKPLFHVAMAYELVFGSSHTTHINCSDPSHATIRIEEKIAVCTLAKSEEELCKLDSSLEFTLKSQGDKNVT YEDGKLSLTVPKRLKDYNIGDKNLFDVIKECFQKFCERLGFFKIKIEHGLGDPLEVSDHLENMEPPIRSNEHGLN >Mature_314_residues SSPISEEKENPIVTLRAQAEKFDFSKLRADEKDISANSGKQMYEDFDRMNFVINKKNIDTILIKALINRDKEEFDKFWEK YCEGLKVSNDKETDRYKEEVEKFYNIGKGYTNLLTKEEDENKSYRAFAKEVFKEIFKYAEAQVPSDSILEELVINCNQAG YVGALYAEDKPLFHVAMAYELVFGSSHTTHINCSDPSHATIRIEEKIAVCTLAKSEEELCKLDSSLEFTLKSQGDKNVTY EDGKLSLTVPKRLKDYNIGDKNLFDVIKECFQKFCERLGFFKIKIEHGLGDPLEVSDHLENMEPPIRSNEHGLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36301; Mature: 36170
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPISEEKENPIVTLRAQAEKFDFSKLRADEKDISANSGKQMYEDFDRMNFVINKKNID CCCCCCCCCCCCEEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHEEEEECCCHH TILIKALINRDKEEFDKFWEKYCEGLKVSNDKETDRYKEEVEKFYNIGKGYTNLLTKEED HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCC ENKSYRAFAKEVFKEIFKYAEAQVPSDSILEELVINCNQAGYVGALYAEDKPLFHVAMAY CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHH ELVFGSSHTTHINCSDPSHATIRIEEKIAVCTLAKSEEELCKLDSSLEFTLKSQGDKNVT HHHCCCCCCEEEECCCCCCEEEEEECCEEEEEECCCHHHHHHCCCCCEEEEECCCCCCCE YEDGKLSLTVPKRLKDYNIGDKNLFDVIKECFQKFCERLGFFKIKIEHGLGDPLEVSDHL EECCEEEEEECHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHH ENMEPPIRSNEHGLN HHCCCCCCCCCCCCC >Mature Secondary Structure SSPISEEKENPIVTLRAQAEKFDFSKLRADEKDISANSGKQMYEDFDRMNFVINKKNID CCCCCCCCCCCEEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHEEEEECCCHH TILIKALINRDKEEFDKFWEKYCEGLKVSNDKETDRYKEEVEKFYNIGKGYTNLLTKEED HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCC ENKSYRAFAKEVFKEIFKYAEAQVPSDSILEELVINCNQAGYVGALYAEDKPLFHVAMAY CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHH ELVFGSSHTTHINCSDPSHATIRIEEKIAVCTLAKSEEELCKLDSSLEFTLKSQGDKNVT HHHCCCCCCEEEECCCCCCEEEEEECCEEEEEECCCHHHHHHCCCCCEEEEECCCCCCCE YEDGKLSLTVPKRLKDYNIGDKNLFDVIKECFQKFCERLGFFKIKIEHGLGDPLEVSDHL EECCEEEEEECHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHH ENMEPPIRSNEHGLN HHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA