| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630500
Identifier: 225630500
GI number: 225630500
Start: 813404
End: 813802
Strand: Reverse
Name: 225630500
Synonym: WRi_007510
Alternate gene names: NA
Gene position: 813802-813404 (Counterclockwise)
Preceding gene: 225630501
Following gene: 225630499
Centisome position: 56.28
GC content: 32.33
Gene sequence:
>399_bases ATGCAATTTTGGCTACTTAAGTCAGAGCCAAGTGAATACTCATGGCAAAAAATGGAAAAGGAGCAGGTAGTTGAGTGGGA TGGTGTGCGCAATTATCAAGCTCAAAATTACATGAAAATTATGAAAGCAAGCGATCTTGCGTTTTTTTATCATACAGGTA AAGAGAAAGCAATACTTGGAATCGTTGAAGTATTTAAAGAGTATTATCATGTTAATGATCCCAAGTTCGGATTAGTGAAT GTAAAGTTTTTGAAACCTTTAAATAACCAAGTAACGTTAAATAATATAAAACAAAACCCACTTTTGAAAAATATGACTAT ATTAAAACAACCACGTTTATCAATTGCCCCAGTTTCGGAAATTGAATGGAATGAAATAATAAGGATGAGTGATGTGTAA
Upstream 100 bases:
>100_bases ACAAAACACTGGAAACAAAACCAGCTGAACAGGTAAGCGAAGGAGCTAAGTGGGGCAGCAATATCTATGATATACCAGCT TACTTAAGAAGAAAAAAATA
Downstream 100 bases:
>100_bases TACCTGTCATTTCAGTTCCTAAATGATGTCATCTCAGCACACAACGCACAGCTGTATGAATATTTGTCTCGAAGGCAGTG CATTAAACGTTATAGCCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MQFWLLKSEPSEYSWQKMEKEQVVEWDGVRNYQAQNYMKIMKASDLAFFYHTGKEKAILGIVEVFKEYYHVNDPKFGLVN VKFLKPLNNQVTLNNIKQNPLLKNMTILKQPRLSIAPVSEIEWNEIIRMSDV
Sequences:
>Translated_132_residues MQFWLLKSEPSEYSWQKMEKEQVVEWDGVRNYQAQNYMKIMKASDLAFFYHTGKEKAILGIVEVFKEYYHVNDPKFGLVN VKFLKPLNNQVTLNNIKQNPLLKNMTILKQPRLSIAPVSEIEWNEIIRMSDV >Mature_132_residues MQFWLLKSEPSEYSWQKMEKEQVVEWDGVRNYQAQNYMKIMKASDLAFFYHTGKEKAILGIVEVFKEYYHVNDPKFGLVN VKFLKPLNNQVTLNNIKQNPLLKNMTILKQPRLSIAPVSEIEWNEIIRMSDV
Specific function: Unknown
COG id: COG2947
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI83267861, Length=165, Percent_Identity=30.9090909090909, Blast_Score=80, Evalue=4e-16, Organism=Homo sapiens, GI40806221, Length=165, Percent_Identity=30.9090909090909, Blast_Score=80, Evalue=4e-16, Organism=Homo sapiens, GI7661804, Length=165, Percent_Identity=30.9090909090909, Blast_Score=80, Evalue=4e-16, Organism=Homo sapiens, GI83267859, Length=78, Percent_Identity=42.3076923076923, Blast_Score=64, Evalue=2e-11, Organism=Homo sapiens, GI40806219, Length=78, Percent_Identity=42.3076923076923, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15656; Mature: 15656
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFWLLKSEPSEYSWQKMEKEQVVEWDGVRNYQAQNYMKIMKASDLAFFYHTGKEKAILG CEEEEECCCCCCCHHHHHCHHHHCCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCCHHHH IVEVFKEYYHVNDPKFGLVNVKFLKPLNNQVTLNNIKQNPLLKNMTILKQPRLSIAPVSE HHHHHHHHHCCCCCCEEEEEEEEECCCCCEEEECCCCCCCCCCCCEECCCCCCCCCCCCC IEWNEIIRMSDV CCHHHEEEECCC >Mature Secondary Structure MQFWLLKSEPSEYSWQKMEKEQVVEWDGVRNYQAQNYMKIMKASDLAFFYHTGKEKAILG CEEEEECCCCCCCHHHHHCHHHHCCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCCHHHH IVEVFKEYYHVNDPKFGLVNVKFLKPLNNQVTLNNIKQNPLLKNMTILKQPRLSIAPVSE HHHHHHHHHCCCCCCEEEEEEEEECCCCCEEEECCCCCCCCCCCCEECCCCCCCCCCCCC IEWNEIIRMSDV CCHHHEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA