Click here to switch to the map view.

The map label for this gene is atpH [H]

Identifier: 225630275

GI number: 225630275

Start: 538797

End: 539357

Strand: Reverse

Name: atpH [H]

Synonym: WRi_004930

Alternate gene names: 225630275

Gene position: 539357-538797 (Counterclockwise)

Preceding gene: 225630276

Following gene: 225630274

Centisome position: 37.3

GC content: 29.77

Gene sequence:

>561_bases
ATGAAAAAGACCCAATACAATAATTTAGTTTCATCTTACGCTAGAGTGCTATTTCATGTCTCAGGAAGCAGGTTAGGTAT
TATAAGGGAAGAAGTAGAATTTTTGTTGGCTTTTTTTAAGGATCAACGTGATGTTTTTGTGTACCTATCTCATCCTATGA
TTTCTTTTGCACACAAAAAAGAAGTGATGCTTTCTATAAATGAGCACTTGAGTGAGAATTTAGTAAAATTTATTATGGTT
ATATTTGCAAATAAACGCTCTAGTTTATTGATCCTTATATTAGAAAAATTCTTAAGTCTTGCAAGAGAAAATGAAAATGA
ATTCGAAATTACTATAAAGTCAGCAGAAACTTTAAAGGAATCTGATATAAAAATAATTACTGAATCTTTGAGCTTTCTTG
GTAAAATAATAAAAGTAAGCAATGTGGTTGACCCTTCTATACTAGGTGGCTTCGTAGTTAGGTATGGTTTTAATTTGATC
GATGCTTCGCTAAAAAGTTACTTGGATAGGTTAGTTGACTTAAGTAAAATGGAAATATTAAAAGTAAGGAATTTTGTATG
A

Upstream 100 bases:

>100_bases
ATTTTCTTTCCTTAAAGAGAAGACCTGTTTATATAAAAAATGCTTGGATTGAAGAATGAAAGATTTGTAGCTGAATTAAT
TTAGATTTACTGGATTTAAT

Downstream 100 bases:

>100_bases
AGAACAGTATGAATGTTTCTGAGATAGCAAGTATAATAAGAGAAAAGGTTGAGACGTTTGATAATCCTATAAAGCGGGAA
AATATAGGTGAAGTAATTTC

Product: ATP synthase F1, delta subunit

Products: ATP; H+; H2O [C]

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta [H]

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MKKTQYNNLVSSYARVLFHVSGSRLGIIREEVEFLLAFFKDQRDVFVYLSHPMISFAHKKEVMLSINEHLSENLVKFIMV
IFANKRSSLLILILEKFLSLARENENEFEITIKSAETLKESDIKIITESLSFLGKIIKVSNVVDPSILGGFVVRYGFNLI
DASLKSYLDRLVDLSKMEILKVRNFV

Sequences:

>Translated_186_residues
MKKTQYNNLVSSYARVLFHVSGSRLGIIREEVEFLLAFFKDQRDVFVYLSHPMISFAHKKEVMLSINEHLSENLVKFIMV
IFANKRSSLLILILEKFLSLARENENEFEITIKSAETLKESDIKIITESLSFLGKIIKVSNVVDPSILGGFVVRYGFNLI
DASLKSYLDRLVDLSKMEILKVRNFV
>Mature_186_residues
MKKTQYNNLVSSYARVLFHVSGSRLGIIREEVEFLLAFFKDQRDVFVYLSHPMISFAHKKEVMLSINEHLSENLVKFIMV
IFANKRSSLLILILEKFLSLARENENEFEITIKSAETLKESDIKIITESLSFLGKIIKVSNVVDPSILGGFVVRYGFNLI
DASLKSYLDRLVDLSKMEILKVRNFV

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction [H]

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000711
- InterPro:   IPR020781 [H]

Pfam domain/function: PF00213 OSCP [H]

EC number: 3.6.3.14 [C]

Molecular weight: Translated: 21427; Mature: 21427

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTQYNNLVSSYARVLFHVSGSRLGIIREEVEFLLAFFKDQRDVFVYLSHPMISFAHKK
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHH
EVMLSINEHLSENLVKFIMVIFANKRSSLLILILEKFLSLARENENEFEITIKSAETLKE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHH
SDIKIITESLSFLGKIIKVSNVVDPSILGGFVVRYGFNLIDASLKSYLDRLVDLSKMEIL
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVRNFV
HHHCCC
>Mature Secondary Structure
MKKTQYNNLVSSYARVLFHVSGSRLGIIREEVEFLLAFFKDQRDVFVYLSHPMISFAHKK
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHH
EVMLSINEHLSENLVKFIMVIFANKRSSLLILILEKFLSLARENENEFEITIKSAETLKE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHH
SDIKIITESLSFLGKIIKVSNVVDPSILGGFVVRYGFNLIDASLKSYLDRLVDLSKMEIL
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVRNFV
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ADP; H+; Phosphate [C]

Specific reaction: ADP + (4) H+ + Phosphate <==> ATP + (3) H+ + H2O [C]

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA