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The map label for this gene is 225630276

Identifier: 225630276

GI number: 225630276

Start: 539399

End: 539749

Strand: Reverse

Name: 225630276

Synonym: WRi_004940

Alternate gene names: NA

Gene position: 539749-539399 (Counterclockwise)

Preceding gene: 225630277

Following gene: 225630275

Centisome position: 37.33

GC content: 27.92

Gene sequence:

>351_bases
GTGGTAAGTAGGTTACGCTACTTTGTAGGTTACTTTGGCGAGTTATTAGTTTTAGTATATTTAAAACTGAAATGGTATAA
TGTTATAAAACGCCGTTACCGTTGTAAGTTCGGTGAAATTGACTTAATTGTATCTAAAAAAAAGGAGCTGATTTTTATAG
AAGTTAAAACAAGTTTACTTGGAAAAGAAATACCGATATCTCATCTTCAATGTCAGTCTATTATAAATTCTTCTAAGTAT
TTCTTAAGTAAAAACCTTAGTTTTTTAGATTATTCAGTCAGATATGATTTATATTTTCTTTCCTTAAAGAGAAGACCTGT
TTATATAAAAAATGCTTGGATTGAAGAATGA

Upstream 100 bases:

>100_bases
TTGATAGGGATATTGCAGCAAGAGGTAAGGTTTATAGTAAAAATAAAGAAGGAGGCAAAGTAGTTACACAAAGTTAATTG
TTATCATAATTGTTCTTCTT

Downstream 100 bases:

>100_bases
AAGATTTGTAGCTGAATTAATTTAGATTTACTGGATTTAATATGAAAAAGACCCAATACAATAATTTAGTTTCATCTTAC
GCTAGAGTGCTATTTCATGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MVSRLRYFVGYFGELLVLVYLKLKWYNVIKRRYRCKFGEIDLIVSKKKELIFIEVKTSLLGKEIPISHLQCQSIINSSKY
FLSKNLSFLDYSVRYDLYFLSLKRRPVYIKNAWIEE

Sequences:

>Translated_116_residues
MVSRLRYFVGYFGELLVLVYLKLKWYNVIKRRYRCKFGEIDLIVSKKKELIFIEVKTSLLGKEIPISHLQCQSIINSSKY
FLSKNLSFLDYSVRYDLYFLSLKRRPVYIKNAWIEE
>Mature_116_residues
MVSRLRYFVGYFGELLVLVYLKLKWYNVIKRRYRCKFGEIDLIVSKKKELIFIEVKTSLLGKEIPISHLQCQSIINSSKY
FLSKNLSFLDYSVRYDLYFLSLKRRPVYIKNAWIEE

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509 [H]

Pfam domain/function: PF02021 UPF0102 [H]

EC number: NA

Molecular weight: Translated: 14018; Mature: 14018

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSRLRYFVGYFGELLVLVYLKLKWYNVIKRRYRCKFGEIDLIVSKKKELIFIEVKTSLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEEEHHHC
GKEIPISHLQCQSIINSSKYFLSKNLSFLDYSVRYDLYFLSLKRRPVYIKNAWIEE
CCCCCHHHHHHHHHHCCCHHHHHCCCCEEEEEEEEEEEEEEECCCCEEEECCCCCC
>Mature Secondary Structure
MVSRLRYFVGYFGELLVLVYLKLKWYNVIKRRYRCKFGEIDLIVSKKKELIFIEVKTSLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEEEHHHC
GKEIPISHLQCQSIINSSKYFLSKNLSFLDYSVRYDLYFLSLKRRPVYIKNAWIEE
CCCCCHHHHHHHHHHCCCHHHHHCCCCEEEEEEEEEEEEEEECCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA