| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
Click here to switch to the map view.
The map label for this gene is dut [H]
Identifier: 225630061
GI number: 225630061
Start: 239749
End: 240210
Strand: Reverse
Name: dut [H]
Synonym: WRi_002310
Alternate gene names: 225630061
Gene position: 240210-239749 (Counterclockwise)
Preceding gene: 225630062
Following gene: 225630060
Centisome position: 16.61
GC content: 41.13
Gene sequence:
>462_bases GTGCAAAGAAGTAAAATTAAAGTAGAAATAAAAAGATTATCACACGGAGAAGACTTGTCTCTTCCATGTTATGCAACTGT GCAAAGTGCTGGTATGGATCTTTATGCTGCATTGAATGACTCTGCTGTTTTAAATCCACTTGAGAGATTACTTGTTCCAA CTGGAATTGTGATTGCAATACCAAACGGTTTTGAGGGGCAAGTACGCCCACGTTCTGGTCTTGCTGCAAAACATGGAATC ACTGTCTTAAACTCTCCGGGCACTATAGACTCTGATTATCGAGGTGAGGTTAAAATTTGCCTAATTAATCTAAGTAATCA ACCATACGAAATAAAAAGAGGAGATAGAATCGCACAAATCCTTATTTCTCCGGTATCTCAGGTAATTTGGGATGACAGAG AAGAATTCTGCGCAGAAGAAACCGGTCGCAATGCAGGGGGCTTTGGCTCAAGCGGCAGGTAG
Upstream 100 bases:
>100_bases GAATTTTTATGGCTGCGCTGGAATGACATCATTTACATTTATCACTTTTGCAGATACAATTTACATGCTATAATTGAGTC TTCATAGATGGTAAATTGGA
Downstream 100 bases:
>100_bases CTTACGAAAAAGCTTGACTATGACAGTTCTTTTATACACAATTTAAGCATATTAATATTTTATTAAATGAAGTCGTTTAT GCTAACTTTCAAAAATCATT
Product: deoxyuridine 5'-triphosphate nucleotidohydrolase
Products: NA
Alternate protein names: dUTPase; dUTP pyrophosphatase [H]
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MQRSKIKVEIKRLSHGEDLSLPCYATVQSAGMDLYAALNDSAVLNPLERLLVPTGIVIAIPNGFEGQVRPRSGLAAKHGI TVLNSPGTIDSDYRGEVKICLINLSNQPYEIKRGDRIAQILISPVSQVIWDDREEFCAEETGRNAGGFGSSGR
Sequences:
>Translated_153_residues MQRSKIKVEIKRLSHGEDLSLPCYATVQSAGMDLYAALNDSAVLNPLERLLVPTGIVIAIPNGFEGQVRPRSGLAAKHGI TVLNSPGTIDSDYRGEVKICLINLSNQPYEIKRGDRIAQILISPVSQVIWDDREEFCAEETGRNAGGFGSSGR >Mature_153_residues MQRSKIKVEIKRLSHGEDLSLPCYATVQSAGMDLYAALNDSAVLNPLERLLVPTGIVIAIPNGFEGQVRPRSGLAAKHGI TVLNSPGTIDSDYRGEVKICLINLSNQPYEIKRGDRIAQILISPVSQVIWDDREEFCAEETGRNAGGFGSSGR
Specific function: This enzyme is involved in nucleotide metabolism:it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA [H]
COG id: COG0756
COG function: function code F; dUTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dUTPase family [H]
Homologues:
Organism=Homo sapiens, GI70906444, Length=149, Percent_Identity=41.6107382550336, Blast_Score=109, Evalue=9e-25, Organism=Homo sapiens, GI4503423, Length=149, Percent_Identity=41.6107382550336, Blast_Score=108, Evalue=1e-24, Organism=Homo sapiens, GI70906441, Length=149, Percent_Identity=41.6107382550336, Blast_Score=108, Evalue=2e-24, Organism=Escherichia coli, GI1790071, Length=150, Percent_Identity=45.3333333333333, Blast_Score=116, Evalue=8e-28, Organism=Caenorhabditis elegans, GI71988561, Length=153, Percent_Identity=41.8300653594771, Blast_Score=117, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6319729, Length=150, Percent_Identity=35.3333333333333, Blast_Score=94, Evalue=9e-21, Organism=Drosophila melanogaster, GI19921126, Length=154, Percent_Identity=34.4155844155844, Blast_Score=82, Evalue=2e-16, Organism=Drosophila melanogaster, GI24583610, Length=133, Percent_Identity=36.8421052631579, Blast_Score=81, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008180 - InterPro: IPR008181 [H]
Pfam domain/function: PF00692 dUTPase [H]
EC number: =3.6.1.23 [H]
Molecular weight: Translated: 16623; Mature: 16623
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRSKIKVEIKRLSHGEDLSLPCYATVQSAGMDLYAALNDSAVLNPLERLLVPTGIVIAI CCCCCEEEEEEECCCCCCCCCCHHEEHHHCCCEEEEECCCCHHHHHHHHHHCCCCEEEEC PNGFEGQVRPRSGLAAKHGITVLNSPGTIDSDYRGEVKICLINLSNQPYEIKRGDRIAQI CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCEEECCCCHHHHH LISPVSQVIWDDREEFCAEETGRNAGGFGSSGR HHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MQRSKIKVEIKRLSHGEDLSLPCYATVQSAGMDLYAALNDSAVLNPLERLLVPTGIVIAI CCCCCEEEEEEECCCCCCCCCCHHEEHHHCCCEEEEECCCCHHHHHHHHHHCCCCEEEEC PNGFEGQVRPRSGLAAKHGITVLNSPGTIDSDYRGEVKICLINLSNQPYEIKRGDRIAQI CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCEEECCCCHHHHH LISPVSQVIWDDREEFCAEETGRNAGGFGSSGR HHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA