| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630060
Identifier: 225630060
GI number: 225630060
Start: 239053
End: 239682
Strand: Reverse
Name: 225630060
Synonym: WRi_002300
Alternate gene names: NA
Gene position: 239682-239053 (Counterclockwise)
Preceding gene: 225630061
Following gene: 225630051
Centisome position: 16.58
GC content: 36.51
Gene sequence:
>630_bases ATGAAGTCGTTTATGCTAACTTTCAAAAATCATTGTGGCCAGCTCCACAAAGCAAACACTGTATTTGTTGCATTTACTGC TATATACGTTATAGGTGGATTAGCAATACTTTCAACACCGCTTTGGAGGCCTTCAACTTGCAAGCTAGCAGCTTTTGCAG CTACACCACTTGGAATGGGCGTTTTAGCATTTGTTGCTGCTGCGCTGACTTATTTAGCAATATATGCTATCAGCAAAAAT AACGAAATATCTGAGTTGAAAGCTCTGAAGGTTATTAAGGATGGGTTGCTAGTAACAAAAGACGCATTTAGGGAAATTGC AAGGAATAACCAAGTTAAAGATGAAGAAGGTAAGGTAGAAAAGGATAAATATTATATAGACTTCAGCTTAGAAGGCAAGA ACTACCGTATTATTGTTGATATTAATCAGCTTACCAGTATACTAGGCAATACTTTACTCTTCAAGATAGGTTCACTAAAA GAGAAAAACGATGAAGGTAAGTTCGAGGCAGTAAATGAAACAAAGTGGAATAAAACATTAGGTTTAGACAAAGATGGTGC TAAAGAGGTTAACACTTATTTAGGCTCACCTATTGTTGAACAAGCTGCTAAAGGAAAAGTACTAGACTAG
Upstream 100 bases:
>100_bases CAATGCAGGGGGCTTTGGCTCAAGCGGCAGGTAGCTTACGAAAAAGCTTGACTATGACAGTTCTTTTATACACAATTTAA GCATATTAATATTTTATTAA
Downstream 100 bases:
>100_bases ACAGCTAAGTATAAAAGAGGTAGATTAAGTCTGCCTCTTTGTTTTTTTGATTTTCAGTGTTACGCGCATAACTGCATGGA TGTTGCGATTCTCAAGGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MKSFMLTFKNHCGQLHKANTVFVAFTAIYVIGGLAILSTPLWRPSTCKLAAFAATPLGMGVLAFVAAALTYLAIYAISKN NEISELKALKVIKDGLLVTKDAFREIARNNQVKDEEGKVEKDKYYIDFSLEGKNYRIIVDINQLTSILGNTLLFKIGSLK EKNDEGKFEAVNETKWNKTLGLDKDGAKEVNTYLGSPIVEQAAKGKVLD
Sequences:
>Translated_209_residues MKSFMLTFKNHCGQLHKANTVFVAFTAIYVIGGLAILSTPLWRPSTCKLAAFAATPLGMGVLAFVAAALTYLAIYAISKN NEISELKALKVIKDGLLVTKDAFREIARNNQVKDEEGKVEKDKYYIDFSLEGKNYRIIVDINQLTSILGNTLLFKIGSLK EKNDEGKFEAVNETKWNKTLGLDKDGAKEVNTYLGSPIVEQAAKGKVLD >Mature_209_residues MKSFMLTFKNHCGQLHKANTVFVAFTAIYVIGGLAILSTPLWRPSTCKLAAFAATPLGMGVLAFVAAALTYLAIYAISKN NEISELKALKVIKDGLLVTKDAFREIARNNQVKDEEGKVEKDKYYIDFSLEGKNYRIIVDINQLTSILGNTLLFKIGSLK EKNDEGKFEAVNETKWNKTLGLDKDGAKEVNTYLGSPIVEQAAKGKVLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23041; Mature: 23041
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSFMLTFKNHCGQLHKANTVFVAFTAIYVIGGLAILSTPLWRPSTCKLAAFAATPLGMG CCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHH VLAFVAAALTYLAIYAISKNNEISELKALKVIKDGLLVTKDAFREIARNNQVKDEEGKVE HHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHCCCEECHHHHHHHHHCCCCCCCCCCEE KDKYYIDFSLEGKNYRIIVDINQLTSILGNTLLFKIGSLKEKNDEGKFEAVNETKWNKTL CCEEEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCC GLDKDGAKEVNTYLGSPIVEQAAKGKVLD CCCCCCHHHHHHHHCCHHHHHHHCCCCCC >Mature Secondary Structure MKSFMLTFKNHCGQLHKANTVFVAFTAIYVIGGLAILSTPLWRPSTCKLAAFAATPLGMG CCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHH VLAFVAAALTYLAIYAISKNNEISELKALKVIKDGLLVTKDAFREIARNNQVKDEEGKVE HHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHCCCEECHHHHHHHHHCCCCCCCCCCEE KDKYYIDFSLEGKNYRIIVDINQLTSILGNTLLFKIGSLKEKNDEGKFEAVNETKWNKTL CCEEEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCC GLDKDGAKEVNTYLGSPIVEQAAKGKVLD CCCCCCHHHHHHHHCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA