| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is gltP [H]
Identifier: 225630049
GI number: 225630049
Start: 222501
End: 223685
Strand: Reverse
Name: gltP [H]
Synonym: WRi_002180
Alternate gene names: 225630049
Gene position: 223685-222501 (Counterclockwise)
Preceding gene: 225630050
Following gene: 225630048
Centisome position: 15.47
GC content: 33.76
Gene sequence:
>1185_bases ATGCACAAGTTTGCAATACTTTTTTCTATACTGCTTGCAATAGTTGCTTACTACCTAAACAATGAAATCATATTTGAAAT AGCAAAGCTATTTAGTGATATCTTTATCAGCTTGCTCAAATTAATAAGCTTACCTCTGGTTTTTTTATCCATAGTTTCCA CAATTTCAGGGCTCAAGGACTCAATTGAAATCAAAGTCTTAGTTAAGAAAACACTATTTTATACTCTGCTTACAACTATT ATAGCTGCGTTTGTTGCATTATCGTTTTATTTGTTAATAGATCCAGCAAGAAAAAATTTCATAAGTAATACAATAGGGAG TATTAACAGCAATAACCACAGTTATTTTTCATATTTAAAATCACTCATTCCTTCTAATTTTGTGCAAGTTTTTCTTGAAA ATAATATGATTGGTAGCATATTGATCGCTTTTTTGATGGGTGGAGCTATTGTTTCACTTTCAAAAGAAAAGCAGGATATA TTATATCAAGTATTCTCTGCACTTTTTGATACGCTACTTAAAATTGCTCAAGGGTTATTAAAATTTATTCCGCTTGCTGT GTGGTCCTTTATCACATGTTTTTTGCACGAATTAAAAGGCGGTAGCGAGTTCTACAGTCTTTTTTGGTATTTTGTTTGCA TAATGTCTGCAAATTTTGTACAGGCATTTCTGATTTTACCGCTACTTATGTGGTATAAAGGCATATCACCAATTCAAACG CTAAGGGGAGTTATGCCGGCACTCACACTTGCGTTTTTTTCTAAATCATCCAGTGCAACGCTGCCCACAACCATAGACTG TGTGCAGAACAAGCTAAAGGTGCCAAAGAAATTGTCGTCTTTTATTTTACCAATATGCACAACAATTAATATGAATGCAT GTGCTGCATTTATACTAATCACTGTAATGTTTGTTGCAGAAATGAACGGATACGCATTTTCCTTGAGCGAAATGTTGATA TGGATTTTTTTAGCTACAGGGGCTGCAATTGGTAACGCTGGAGTGCCGATGGGGTGCTATTTTATGGCAACCAGTTATCT CGTATCGATGAATGTTCCTTTGCATATTATGGGACTGATTTTGCCTATTTATACAATCATCGATATGTTTGAAACTGCAA TAAATGTGTGGTCTGATATTTGCATAACTCAGATAATTAATAAAGAATGTAATAGTGAAACTTAA
Upstream 100 bases:
>100_bases TCCTCTTATCTTTCCCTAATCTGTAAAGTTATTTTGTCTATCAATCTGATTCCAAAACAGCAAAATTATTGTATAATGTT ACTTTGAAGTTTTATTTTCA
Downstream 100 bases:
>100_bases AAAATGATATTAGACGAAAATAACCTAATAATAAAAGAATTTAAAGAAGCAGAAGCAATTTTGCATGGGCATTTTATTTT ATCTTCTGGATTGCATAGCA
Product: Na+/H+-dicarboxylate symporter family protein
Products: L-aspartate [Cytoplasm]; Proton [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate-aspartate carrier protein [H]
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MHKFAILFSILLAIVAYYLNNEIIFEIAKLFSDIFISLLKLISLPLVFLSIVSTISGLKDSIEIKVLVKKTLFYTLLTTI IAAFVALSFYLLIDPARKNFISNTIGSINSNNHSYFSYLKSLIPSNFVQVFLENNMIGSILIAFLMGGAIVSLSKEKQDI LYQVFSALFDTLLKIAQGLLKFIPLAVWSFITCFLHELKGGSEFYSLFWYFVCIMSANFVQAFLILPLLMWYKGISPIQT LRGVMPALTLAFFSKSSSATLPTTIDCVQNKLKVPKKLSSFILPICTTINMNACAAFILITVMFVAEMNGYAFSLSEMLI WIFLATGAAIGNAGVPMGCYFMATSYLVSMNVPLHIMGLILPIYTIIDMFETAINVWSDICITQIINKECNSET
Sequences:
>Translated_394_residues MHKFAILFSILLAIVAYYLNNEIIFEIAKLFSDIFISLLKLISLPLVFLSIVSTISGLKDSIEIKVLVKKTLFYTLLTTI IAAFVALSFYLLIDPARKNFISNTIGSINSNNHSYFSYLKSLIPSNFVQVFLENNMIGSILIAFLMGGAIVSLSKEKQDI LYQVFSALFDTLLKIAQGLLKFIPLAVWSFITCFLHELKGGSEFYSLFWYFVCIMSANFVQAFLILPLLMWYKGISPIQT LRGVMPALTLAFFSKSSSATLPTTIDCVQNKLKVPKKLSSFILPICTTINMNACAAFILITVMFVAEMNGYAFSLSEMLI WIFLATGAAIGNAGVPMGCYFMATSYLVSMNVPLHIMGLILPIYTIIDMFETAINVWSDICITQIINKECNSET >Mature_394_residues MHKFAILFSILLAIVAYYLNNEIIFEIAKLFSDIFISLLKLISLPLVFLSIVSTISGLKDSIEIKVLVKKTLFYTLLTTI IAAFVALSFYLLIDPARKNFISNTIGSINSNNHSYFSYLKSLIPSNFVQVFLENNMIGSILIAFLMGGAIVSLSKEKQDI LYQVFSALFDTLLKIAQGLLKFIPLAVWSFITCFLHELKGGSEFYSLFWYFVCIMSANFVQAFLILPLLMWYKGISPIQT LRGVMPALTLAFFSKSSSATLPTTIDCVQNKLKVPKKLSSFILPICTTINMNACAAFILITVMFVAEMNGYAFSLSEMLI WIFLATGAAIGNAGVPMGCYFMATSYLVSMNVPLHIMGLILPIYTIIDMFETAINVWSDICITQIINKECNSET
Specific function: This carrier protein is part of the Na(+)-independent, binding-protein-independent glutamate-aspartate transport system [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI66773030, Length=261, Percent_Identity=30.2681992337165, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI21314632, Length=391, Percent_Identity=25.8312020460358, Blast_Score=116, Evalue=4e-26, Organism=Homo sapiens, GI223468564, Length=247, Percent_Identity=27.5303643724696, Blast_Score=106, Evalue=4e-23, Organism=Homo sapiens, GI223468566, Length=247, Percent_Identity=27.5303643724696, Blast_Score=105, Evalue=5e-23, Organism=Homo sapiens, GI4827012, Length=254, Percent_Identity=25.9842519685039, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI5032093, Length=247, Percent_Identity=27.5303643724696, Blast_Score=102, Evalue=7e-22, Organism=Homo sapiens, GI194239697, Length=226, Percent_Identity=28.7610619469027, Blast_Score=101, Evalue=1e-21, Organism=Homo sapiens, GI169790839, Length=238, Percent_Identity=26.890756302521, Blast_Score=99, Evalue=6e-21, Organism=Homo sapiens, GI40254478, Length=406, Percent_Identity=21.9211822660099, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI301601644, Length=122, Percent_Identity=34.4262295081967, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI262359914, Length=178, Percent_Identity=25.8426966292135, Blast_Score=74, Evalue=3e-13, Organism=Escherichia coli, GI1790514, Length=399, Percent_Identity=24.3107769423559, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI1788024, Length=395, Percent_Identity=26.8354430379747, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1789473, Length=385, Percent_Identity=23.8961038961039, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1789947, Length=400, Percent_Identity=20.25, Blast_Score=69, Evalue=5e-13, Organism=Caenorhabditis elegans, GI71996953, Length=414, Percent_Identity=22.463768115942, Blast_Score=124, Evalue=7e-29, Organism=Caenorhabditis elegans, GI193206505, Length=420, Percent_Identity=23.8095238095238, Blast_Score=122, Evalue=2e-28, Organism=Caenorhabditis elegans, GI71983099, Length=398, Percent_Identity=23.1155778894472, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI71983106, Length=398, Percent_Identity=23.1155778894472, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI193206654, Length=400, Percent_Identity=25.75, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17537407, Length=385, Percent_Identity=24.9350649350649, Blast_Score=104, Evalue=8e-23, Organism=Caenorhabditis elegans, GI17541374, Length=394, Percent_Identity=22.8426395939086, Blast_Score=92, Evalue=3e-19, Organism=Drosophila melanogaster, GI24583025, Length=394, Percent_Identity=24.8730964467005, Blast_Score=112, Evalue=4e-25, Organism=Drosophila melanogaster, GI17137668, Length=394, Percent_Identity=24.8730964467005, Blast_Score=112, Evalue=4e-25, Organism=Drosophila melanogaster, GI24583023, Length=394, Percent_Identity=24.8730964467005, Blast_Score=112, Evalue=4e-25, Organism=Drosophila melanogaster, GI281360481, Length=420, Percent_Identity=20.7142857142857, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI281360483, Length=420, Percent_Identity=20.7142857142857, Blast_Score=72, Evalue=8e-13, Organism=Drosophila melanogaster, GI17137666, Length=420, Percent_Identity=20.7142857142857, Blast_Score=72, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 43959; Mature: 43959
Theoretical pI: Translated: 8.18; Mature: 8.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKFAILFSILLAIVAYYLNNEIIFEIAKLFSDIFISLLKLISLPLVFLSIVSTISGLKD CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH SIEIKVLVKKTLFYTLLTTIIAAFVALSFYLLIDPARKNFISNTIGSINSNNHSYFSYLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHHHH SLIPSNFVQVFLENNMIGSILIAFLMGGAIVSLSKEKQDILYQVFSALFDTLLKIAQGLL HHCCHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KFIPLAVWSFITCFLHELKGGSEFYSLFWYFVCIMSANFVQAFLILPLLMWYKGISPIQT HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LRGVMPALTLAFFSKSSSATLPTTIDCVQNKLKVPKKLSSFILPICTTINMNACAAFILI HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHH TVMFVAEMNGYAFSLSEMLIWIFLATGAAIGNAGVPMGCYFMATSYLVSMNVPLHIMGLI HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH LPIYTIIDMFETAINVWSDICITQIINKECNSET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MHKFAILFSILLAIVAYYLNNEIIFEIAKLFSDIFISLLKLISLPLVFLSIVSTISGLKD CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH SIEIKVLVKKTLFYTLLTTIIAAFVALSFYLLIDPARKNFISNTIGSINSNNHSYFSYLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHHHH SLIPSNFVQVFLENNMIGSILIAFLMGGAIVSLSKEKQDILYQVFSALFDTLLKIAQGLL HHCCHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KFIPLAVWSFITCFLHELKGGSEFYSLFWYFVCIMSANFVQAFLILPLLMWYKGISPIQT HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LRGVMPALTLAFFSKSSSATLPTTIDCVQNKLKVPKKLSSFILPICTTINMNACAAFILI HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHH TVMFVAEMNGYAFSLSEMLIWIFLATGAAIGNAGVPMGCYFMATSYLVSMNVPLHIMGLI HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH LPIYTIIDMFETAINVWSDICITQIINKECNSET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate [Periplasm]; Proton [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-aspartate [Periplasm] = Proton [Cytoplasm] + L-aspartate [Cytoplasm] Proton [Periplasm] + L-glutamate [Periplasm] = Proton [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1971622; 1551855; 8265357; 9278503 [H]