| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630010
Identifier: 225630010
GI number: 225630010
Start: 167288
End: 168574
Strand: Direct
Name: 225630010
Synonym: WRi_001680
Alternate gene names: NA
Gene position: 167288-168574 (Clockwise)
Preceding gene: 225630008
Following gene: 225630011
Centisome position: 11.57
GC content: 34.34
Gene sequence:
>1287_bases ATGTTAAGTGAGATTATAAAACAAGCTGGTGGCTCGGATACAAAAGCACTAGCTACGATATTTAGTCGTAAAAAATTTTT TAGACAAGTCGATGGTGGTGAAGAAAGGTATAAAAACTACCTAATAGATCTGGTTTCAGAAAGTTCTGGTTATCAAGATA ATACTGTAACTCTGCCAAGAGAAATAATACCTGATAGTGTTACTCTGGATGCTTTGTATTTTACTCATAAAAAAGATCCT TTAACTCTACCTATTTTATTAAGATATTTCACTCATAAAAATTTACTTCAAGAAGCCAAAGATGATTTGGATAAACTAAA TCAAAAGCTGCAAGGTGCAATGGATGAGGAGCTAAAAAAGCTACAGGACGAGCTGAAGCTATTGTGTGAAGAGACAGTTG AGTTATCTGGCAAAAAAGTGGATGTTAAACAGAGTAAAGTACTTGTTACAAAGAGTGAAAAAATAACTGAAACTGCATCT AAGATCGAGGAAATTAAGTCATATAAAAAAAACATCAAAAACCTTTTTAACGGTAGTAAAACAAAATTAAATTCTTATCC ATCCCAATATTTCTCTATACTAAATAGTGGGCTTATAGAGATAATGGAAAAAAAACTAACAGCTTATGTTAAGGGTGATA CTGATATTGGGGAAACATATTCAAGTCTTAATAGTAGAGCAAAAAAAATTATAAGAGTAAGAAATGTGAAAAATACACTA GTACTTTCTGCGTCTCTGACCTTTTTCATACCATGTATTTCAGTAATGTGTCTTGGCATGTTTTGTATGGGAGTACAACA TGGACCACGACCTAGCTTCTTATTTGCTATGATTGACATCACACTTTTTTATATAGTACCAATTATGTTATCAATCGCCG TTGCATTATACGCAACAGCAGGTGTGGCTCATCTAATAAAGAGACGCTATGAGCAAAGTTTTGAAAAGGAAATGCAAGAC TTCATAGAAGGACCAAAGCGTGCAGAGAAAGCAACTAATGAAGATGTGAAGAAATTAGAACAAGAAGGAACAAAAGTAGG CGATGTAATAGATCTTTCTGGCAATTGTGAGATGAATGATAAGGTAGAACCTTCGGCACCACCTAAGCGGTCAGGATTGT ACCCAGATCTTTCAGAAGAACTTTTAGCATCGTCATGCAATAAGAAAGATTCACAACCAAACAGTAACGTTGATTCTACT CTGTCTGGTGTAACACAAGTAAGAGAAAGCAATGTACAATTATTGAGAGGTATAGTCATAGGAAAAGAACAGGAAATAGG TGTGTAG
Upstream 100 bases:
>100_bases AAGCTTTATTAATTAAATATTATAGTTAATAATTATACTCTTTTGACAAGTAATTAAAATAGTGTTAAACTGCGTGCATA AAATAATTAGTGAGGTTACA
Downstream 100 bases:
>100_bases ATAACGGCAAGCAAAGTTACAAATGTAATTTTGCTTGACTATCCATTTATTACCACCTAAAGCAGCTAACAAAGCCATCC CATATGACATTTTGTCTATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MLSEIIKQAGGSDTKALATIFSRKKFFRQVDGGEERYKNYLIDLVSESSGYQDNTVTLPREIIPDSVTLDALYFTHKKDP LTLPILLRYFTHKNLLQEAKDDLDKLNQKLQGAMDEELKKLQDELKLLCEETVELSGKKVDVKQSKVLVTKSEKITETAS KIEEIKSYKKNIKNLFNGSKTKLNSYPSQYFSILNSGLIEIMEKKLTAYVKGDTDIGETYSSLNSRAKKIIRVRNVKNTL VLSASLTFFIPCISVMCLGMFCMGVQHGPRPSFLFAMIDITLFYIVPIMLSIAVALYATAGVAHLIKRRYEQSFEKEMQD FIEGPKRAEKATNEDVKKLEQEGTKVGDVIDLSGNCEMNDKVEPSAPPKRSGLYPDLSEELLASSCNKKDSQPNSNVDST LSGVTQVRESNVQLLRGIVIGKEQEIGV
Sequences:
>Translated_428_residues MLSEIIKQAGGSDTKALATIFSRKKFFRQVDGGEERYKNYLIDLVSESSGYQDNTVTLPREIIPDSVTLDALYFTHKKDP LTLPILLRYFTHKNLLQEAKDDLDKLNQKLQGAMDEELKKLQDELKLLCEETVELSGKKVDVKQSKVLVTKSEKITETAS KIEEIKSYKKNIKNLFNGSKTKLNSYPSQYFSILNSGLIEIMEKKLTAYVKGDTDIGETYSSLNSRAKKIIRVRNVKNTL VLSASLTFFIPCISVMCLGMFCMGVQHGPRPSFLFAMIDITLFYIVPIMLSIAVALYATAGVAHLIKRRYEQSFEKEMQD FIEGPKRAEKATNEDVKKLEQEGTKVGDVIDLSGNCEMNDKVEPSAPPKRSGLYPDLSEELLASSCNKKDSQPNSNVDST LSGVTQVRESNVQLLRGIVIGKEQEIGV >Mature_428_residues MLSEIIKQAGGSDTKALATIFSRKKFFRQVDGGEERYKNYLIDLVSESSGYQDNTVTLPREIIPDSVTLDALYFTHKKDP LTLPILLRYFTHKNLLQEAKDDLDKLNQKLQGAMDEELKKLQDELKLLCEETVELSGKKVDVKQSKVLVTKSEKITETAS KIEEIKSYKKNIKNLFNGSKTKLNSYPSQYFSILNSGLIEIMEKKLTAYVKGDTDIGETYSSLNSRAKKIIRVRNVKNTL VLSASLTFFIPCISVMCLGMFCMGVQHGPRPSFLFAMIDITLFYIVPIMLSIAVALYATAGVAHLIKRRYEQSFEKEMQD FIEGPKRAEKATNEDVKKLEQEGTKVGDVIDLSGNCEMNDKVEPSAPPKRSGLYPDLSEELLASSCNKKDSQPNSNVDST LSGVTQVRESNVQLLRGIVIGKEQEIGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47984; Mature: 47984
Theoretical pI: Translated: 8.08; Mature: 8.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSEIIKQAGGSDTKALATIFSRKKFFRQVDGGEERYKNYLIDLVSESSGYQDNTVTLPR CHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEECCH EIIPDSVTLDALYFTHKKDPLTLPILLRYFTHKNLLQEAKDDLDKLNQKLQGAMDEELKK HHCCCCCCHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH LQDELKLLCEETVELSGKKVDVKQSKVLVTKSEKITETASKIEEIKSYKKNIKNLFNGSK HHHHHHHHHHHHHHCCCCEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCC TKLNSYPSQYFSILNSGLIEIMEKKLTAYVKGDTDIGETYSSLNSRAKKIIRVRNVKNTL HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHE VLSASLTFFIPCISVMCLGMFCMGVQHGPRPSFLFAMIDITLFYIVPIMLSIAVALYATA EEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVAHLIKRRYEQSFEKEMQDFIEGPKRAEKATNEDVKKLEQEGTKVGDVIDLSGNCEMND HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHCCCCCCCEEECCCCCCCCC KVEPSAPPKRSGLYPDLSEELLASSCNKKDSQPNSNVDSTLSGVTQVRESNVQLLRGIVI CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH GKEQEIGV CCCCCCCC >Mature Secondary Structure MLSEIIKQAGGSDTKALATIFSRKKFFRQVDGGEERYKNYLIDLVSESSGYQDNTVTLPR CHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEECCH EIIPDSVTLDALYFTHKKDPLTLPILLRYFTHKNLLQEAKDDLDKLNQKLQGAMDEELKK HHCCCCCCHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH LQDELKLLCEETVELSGKKVDVKQSKVLVTKSEKITETASKIEEIKSYKKNIKNLFNGSK HHHHHHHHHHHHHHCCCCEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCC TKLNSYPSQYFSILNSGLIEIMEKKLTAYVKGDTDIGETYSSLNSRAKKIIRVRNVKNTL HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHE VLSASLTFFIPCISVMCLGMFCMGVQHGPRPSFLFAMIDITLFYIVPIMLSIAVALYATA EEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVAHLIKRRYEQSFEKEMQDFIEGPKRAEKATNEDVKKLEQEGTKVGDVIDLSGNCEMND HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHCCCCCCCEEECCCCCCCCC KVEPSAPPKRSGLYPDLSEELLASSCNKKDSQPNSNVDSTLSGVTQVRESNVQLLRGIVI CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH GKEQEIGV CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA