| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630011
Identifier: 225630011
GI number: 225630011
Start: 169632
End: 170804
Strand: Direct
Name: 225630011
Synonym: WRi_001700
Alternate gene names: NA
Gene position: 169632-170804 (Clockwise)
Preceding gene: 225630010
Following gene: 225630015
Centisome position: 11.73
GC content: 34.36
Gene sequence:
>1173_bases ATGAAGTTAAGGTACTACCTGATAGCACTGCTTTCGTTATTATTTTCACAGAATAGTGCTAGCTCTAGAACAATTTTGGA TAAGGAAATATTTTATGTAGAGCTAGACGGAAAAATAGATTTGAGATTCGGCTACGCCTTCAACAGAGATTCTTTCAATG CTAAGGCTAAGGATAAAACTTCAAGTTATTCATACTTGCGCTTTCTTTATCTACAGCAAGTTTATCCAAATACTCAAATG GGGGTTAATGTTAAGGCAGGGGTTTCTGGTATTGCAAACCTAAAAGCGTTAGACATAGAAAAGTTAGACATGGAGGAATG GTATTTTATCATAAAAAACCAGGAACTTGGATCAGTTGAATATGGTAAAAGAAGTTTAGTTAGTCAGAGCATGTTAATTA ACACTTCAAAAATTTATGCAGCTGCTGGGGGAATAAATGGTCATTGGACAAACTATGCAAATTTGCGTGGTAACAAAAAC AAAGATAATGACCCTGGATATGATAAAGACAAGACTTTTTGGGTAAAACCCAACATTTATAGCGATTATAATGGGCTAGA ACTAGGGTTAAGACAATCATCAATTAACTACATCTCCCCTGAAATCTATAACTTTCAACTCGGGTTCAGTTATGTCCCAG GAAAAAATAACTTACAGTACAGCAATCTAATTGCTGCTGGCCTTTCCTATAAAAACAGCTTGTCAGATGATATAGGTTTT ACTACTGCTTTGACTGGTGAATTTGCAAGAGAAAATTTAACTGGTTGCTCAGATGGAACTCCTGAAGGTTATAAATGTCG TAATCAATTACTACACTGGAATTTTGGTTTGAAGCTAAAATTGTTCGATCTTGATTGCATTTTTTCGTATGGTAATGGCG GTAAATCTGGTGAGAAGCATAATCCTGAAACAAATAATACGTATTATATAAATGCAGGTATCGCTTACCGTTCTGATTCT TACAAATCGAGCTTAACATATTTTAGTAGTGGTAGGGATATTGCAGGCGAAGGTACAAACGAGTTAACATCATATGCTTT AAGCCTTGAAAATTCTCTTTTTTTAGGTACTTCATACTATTTCGATATTGTAAAATTTAGTACCAAAGAACCTAAAATAG AAAATAACAACTCTGGTTATGTGTTCTTGGCTGGACTGAAATTAAGTTTTTAA
Upstream 100 bases:
>100_bases AAAAACAGGCAGCAAAATCTACCAGCGGTGCCTTCTGAAAAGTTGTTTTTTATTTATATTGAGTTTAAACTTAAATTTTT ACAAAAATTTAAGTTTATTT
Downstream 100 bases:
>100_bases TATTGCCTCCTTCCAACACTCTTTTCTGTCATCCAAGGTAACCGTTCACAGATTTCCACTTAATTTTTCAATCTCACTCA TGGAGAGGCCAGTAAACTGA
Product: putative outer membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MKLRYYLIALLSLLFSQNSASSRTILDKEIFYVELDGKIDLRFGYAFNRDSFNAKAKDKTSSYSYLRFLYLQQVYPNTQM GVNVKAGVSGIANLKALDIEKLDMEEWYFIIKNQELGSVEYGKRSLVSQSMLINTSKIYAAAGGINGHWTNYANLRGNKN KDNDPGYDKDKTFWVKPNIYSDYNGLELGLRQSSINYISPEIYNFQLGFSYVPGKNNLQYSNLIAAGLSYKNSLSDDIGF TTALTGEFARENLTGCSDGTPEGYKCRNQLLHWNFGLKLKLFDLDCIFSYGNGGKSGEKHNPETNNTYYINAGIAYRSDS YKSSLTYFSSGRDIAGEGTNELTSYALSLENSLFLGTSYYFDIVKFSTKEPKIENNNSGYVFLAGLKLSF
Sequences:
>Translated_390_residues MKLRYYLIALLSLLFSQNSASSRTILDKEIFYVELDGKIDLRFGYAFNRDSFNAKAKDKTSSYSYLRFLYLQQVYPNTQM GVNVKAGVSGIANLKALDIEKLDMEEWYFIIKNQELGSVEYGKRSLVSQSMLINTSKIYAAAGGINGHWTNYANLRGNKN KDNDPGYDKDKTFWVKPNIYSDYNGLELGLRQSSINYISPEIYNFQLGFSYVPGKNNLQYSNLIAAGLSYKNSLSDDIGF TTALTGEFARENLTGCSDGTPEGYKCRNQLLHWNFGLKLKLFDLDCIFSYGNGGKSGEKHNPETNNTYYINAGIAYRSDS YKSSLTYFSSGRDIAGEGTNELTSYALSLENSLFLGTSYYFDIVKFSTKEPKIENNNSGYVFLAGLKLSF >Mature_390_residues MKLRYYLIALLSLLFSQNSASSRTILDKEIFYVELDGKIDLRFGYAFNRDSFNAKAKDKTSSYSYLRFLYLQQVYPNTQM GVNVKAGVSGIANLKALDIEKLDMEEWYFIIKNQELGSVEYGKRSLVSQSMLINTSKIYAAAGGINGHWTNYANLRGNKN KDNDPGYDKDKTFWVKPNIYSDYNGLELGLRQSSINYISPEIYNFQLGFSYVPGKNNLQYSNLIAAGLSYKNSLSDDIGF TTALTGEFARENLTGCSDGTPEGYKCRNQLLHWNFGLKLKLFDLDCIFSYGNGGKSGEKHNPETNNTYYINAGIAYRSDS YKSSLTYFSSGRDIAGEGTNELTSYALSLENSLFLGTSYYFDIVKFSTKEPKIENNNSGYVFLAGLKLSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001702 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43964; Mature: 43964
Theoretical pI: Translated: 8.29; Mature: 8.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLRYYLIALLSLLFSQNSASSRTILDKEIFYVELDGKIDLRFGYAFNRDSFNAKAKDKT CCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCEEEEEEEEEECCCCCCCCCCCCC SSYSYLRFLYLQQVYPNTQMGVNVKAGVSGIANLKALDIEKLDMEEWYFIIKNQELGSVE CCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEECEECCCCCCEEEEEECCCCCCCC YGKRSLVSQSMLINTSKIYAAAGGINGHWTNYANLRGNKNKDNDPGYDKDKTFWVKPNIY CCHHHHHHHHHEEECCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEECCCCC SDYNGLELGLRQSSINYISPEIYNFQLGFSYVPGKNNLQYSNLIAAGLSYKNSLSDDIGF CCCCCEEEEEEECCCCCCCCEEEEEEEEEEECCCCCCCCHHHHHEECCCCCCCCCCCCCE TTALTGEFARENLTGCSDGTPEGYKCRNQLLHWNFGLKLKLFDLDCIFSYGNGGKSGEKH EEEECCHHHHCCCCCCCCCCCCCHHHHCCEEEECCCCEEEEEEEEEEEEECCCCCCCCCC NPETNNTYYINAGIAYRSDSYKSSLTYFSSGRDIAGEGTNELTSYALSLENSLFLGTSYY CCCCCCEEEEECCEEECCCCCCCCEEEEECCCCCCCCCCHHHHHHHEEECCCEEEECCEE FDIVKFSTKEPKIENNNSGYVFLAGLKLSF EEEEEECCCCCCCCCCCCCEEEEEEEEECC >Mature Secondary Structure MKLRYYLIALLSLLFSQNSASSRTILDKEIFYVELDGKIDLRFGYAFNRDSFNAKAKDKT CCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCEEEEEEEEEECCCCCCCCCCCCC SSYSYLRFLYLQQVYPNTQMGVNVKAGVSGIANLKALDIEKLDMEEWYFIIKNQELGSVE CCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEECEECCCCCCEEEEEECCCCCCCC YGKRSLVSQSMLINTSKIYAAAGGINGHWTNYANLRGNKNKDNDPGYDKDKTFWVKPNIY CCHHHHHHHHHEEECCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEECCCCC SDYNGLELGLRQSSINYISPEIYNFQLGFSYVPGKNNLQYSNLIAAGLSYKNSLSDDIGF CCCCCEEEEEEECCCCCCCCEEEEEEEEEEECCCCCCCCHHHHHEECCCCCCCCCCCCCE TTALTGEFARENLTGCSDGTPEGYKCRNQLLHWNFGLKLKLFDLDCIFSYGNGGKSGEKH EEEECCHHHHCCCCCCCCCCCCCHHHHCCEEEECCCCEEEEEEEEEEEEECCCCCCCCCC NPETNNTYYINAGIAYRSDSYKSSLTYFSSGRDIAGEGTNELTSYALSLENSLFLGTSYY CCCCCCEEEEECCEEECCCCCCCCEEEEECCCCCCCCCCHHHHHHHEEECCCEEEECCEE FDIVKFSTKEPKIENNNSGYVFLAGLKLSF EEEEEECCCCCCCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA