Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222527202

Identifier: 222527202

GI number: 222527202

Start: 4934098

End: 4934940

Strand: Direct

Name: 222527202

Synonym: Chy400_3986

Alternate gene names: NA

Gene position: 4934098-4934940 (Clockwise)

Preceding gene: 222527201

Following gene: 222527203

Centisome position: 93.64

GC content: 63.7

Gene sequence:

>843_bases
ATGGACTTTTCGGTTCTGCTCGTATATCATGACGCTATGACACGAAAAGCCTATCCCAGTGATGTTTCCGATGAGGAGTG
GGCGTTTGTCGCGCCCTATTTGACGCTGATGGACGAAGCAGCACCGCAGCGGAACTACCCCCTGCGCGACGTCTCCAATG
CGCTGCGCTACCTTCTGCGTACCGGTGCGCCGTGGCGGATGCTGCCCACTGACGTGCCGCCGTGGCATGTGGTGTATCAA
CAGACCCAGCGCTGGCTGAAGGCGGGTGTGGTTGAGCAGATGGTGCATGATGTGCGGATGCTGCTGCGCGACATCACCGA
CCGCACGCCCCAGCCTCGCGCCGTCGTTGTGGACAGCCGGACACTCCAGTCGACGCCAGAAAGCGGGGAACGTGCCGGCT
ACGATGGACATAAGCGGCGCAAAGGCTCGAAGGTGCATGTGGCGGTGGCTACCCTGGGGCACCTGCTGGCGGTTGTGGTC
ACGCCAGCCAATGAACAAGACCGGGCGCAGGTGGCGGCGCTGGCACAGCGCATGCAGGCGATACCTGGCGACACGGTGGA
GGTGGCCTTCGTTGACCAGGGCTACACCGGTGAGCAACCGGCAGCCGATGCCGCCGCCCACGGCAGTCGCCTGGCGGTGG
TCACGCTGCCGACCGCCAAGCGAGGCTTTGTCTTGCTGCCGCGGCGCTGGGTGGTCGAGCGCAGTTTCGCCTGGATGACG
CGCTTCCGTCGCCTGGTGCGTGACGACGAACGTGTGGCGGAGACGCTGGCCGGCTTGCATGTCGTTGCCTTCGCCATCTT
GTTGGCCCATCGGTTTGTCTCGCTCATGGTTCAACGTTCATAA

Upstream 100 bases:

>100_bases
TCGCCCCATCATCCTGGAGTTGGGCCGGACGAAGACCGACCCGATCACCGAGGCGTATCTGGACAAGTTGCTCAAAGAGC
TGCAAGGACTAGAGCCTGTT

Downstream 100 bases:

>100_bases
CAGGCTCTAGGCGTCACCATCACACGGGATCGCATTCGCCTGGTGGATTTAGAGTGAGGGAGCAAGATGGACAAGATTAG
CGTCGAGCTACGGTTCTTTC

Product: transposase IS5 family protein

Products: NA

Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; Transposase IS5 Family Protein; IS5 Family Transposase; Transposase-Like Protein; Transposase Of; IS4 Insertion Sequence Transposase Protein; Transposase And Inactivated Derivatives-Like Protein; Transposase Fragment; Transposase Protein; ISXo3 Transposase ORF B; LOW QUALITY PROTEIN Transposase; Transposase And Inactivated Derivatives; Is4 Transposase Protein; Transposase IS5 Family Protein-Like Protein; Family Transposase; Transposase Is4 Family Protein; Transposon; Transposase Is4 Family; IS Transposase; ISPsy19 Transposase; Transposase IS5 Family; Isxo3 Transposase Protein; Transposase Is4-Like Protein; Transposase And Inactivated Derivatives-Like

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MDFSVLLVYHDAMTRKAYPSDVSDEEWAFVAPYLTLMDEAAPQRNYPLRDVSNALRYLLRTGAPWRMLPTDVPPWHVVYQ
QTQRWLKAGVVEQMVHDVRMLLRDITDRTPQPRAVVVDSRTLQSTPESGERAGYDGHKRRKGSKVHVAVATLGHLLAVVV
TPANEQDRAQVAALAQRMQAIPGDTVEVAFVDQGYTGEQPAADAAAHGSRLAVVTLPTAKRGFVLLPRRWVVERSFAWMT
RFRRLVRDDERVAETLAGLHVVAFAILLAHRFVSLMVQRS

Sequences:

>Translated_280_residues
MDFSVLLVYHDAMTRKAYPSDVSDEEWAFVAPYLTLMDEAAPQRNYPLRDVSNALRYLLRTGAPWRMLPTDVPPWHVVYQ
QTQRWLKAGVVEQMVHDVRMLLRDITDRTPQPRAVVVDSRTLQSTPESGERAGYDGHKRRKGSKVHVAVATLGHLLAVVV
TPANEQDRAQVAALAQRMQAIPGDTVEVAFVDQGYTGEQPAADAAAHGSRLAVVTLPTAKRGFVLLPRRWVVERSFAWMT
RFRRLVRDDERVAETLAGLHVVAFAILLAHRFVSLMVQRS
>Mature_280_residues
MDFSVLLVYHDAMTRKAYPSDVSDEEWAFVAPYLTLMDEAAPQRNYPLRDVSNALRYLLRTGAPWRMLPTDVPPWHVVYQ
QTQRWLKAGVVEQMVHDVRMLLRDITDRTPQPRAVVVDSRTLQSTPESGERAGYDGHKRRKGSKVHVAVATLGHLLAVVV
TPANEQDRAQVAALAQRMQAIPGDTVEVAFVDQGYTGEQPAADAAAHGSRLAVVTLPTAKRGFVLLPRRWVVERSFAWMT
RFRRLVRDDERVAETLAGLHVVAFAILLAHRFVSLMVQRS

Specific function: Unknown

COG id: COG3293

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31529; Mature: 31529

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFSVLLVYHDAMTRKAYPSDVSDEEWAFVAPYLTLMDEAAPQRNYPLRDVSNALRYLLR
CCEEEEEEEEHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
TGAPWRMLPTDVPPWHVVYQQTQRWLKAGVVEQMVHDVRMLLRDITDRTPQPRAVVVDSR
CCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC
TLQSTPESGERAGYDGHKRRKGSKVHVAVATLGHLLAVVVTPANEQDRAQVAALAQRMQA
HHCCCCCCCCCCCCCCHHHCCCCEEEEHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHH
IPGDTVEVAFVDQGYTGEQPAADAAAHGSRLAVVTLPTAKRGFVLLPRRWVVERSFAWMT
CCCCCEEEEEEECCCCCCCCCHHHHHCCCEEEEEEECCCCCCEEECCHHHHHHHHHHHHH
RFRRLVRDDERVAETLAGLHVVAFAILLAHRFVSLMVQRS
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDFSVLLVYHDAMTRKAYPSDVSDEEWAFVAPYLTLMDEAAPQRNYPLRDVSNALRYLLR
CCEEEEEEEEHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
TGAPWRMLPTDVPPWHVVYQQTQRWLKAGVVEQMVHDVRMLLRDITDRTPQPRAVVVDSR
CCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC
TLQSTPESGERAGYDGHKRRKGSKVHVAVATLGHLLAVVVTPANEQDRAQVAALAQRMQA
HHCCCCCCCCCCCCCCHHHCCCCEEEEHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHH
IPGDTVEVAFVDQGYTGEQPAADAAAHGSRLAVVTLPTAKRGFVLLPRRWVVERSFAWMT
CCCCCEEEEEEECCCCCCCCCHHHHHCCCEEEEEEECCCCCCEEECCHHHHHHHHHHHHH
RFRRLVRDDERVAETLAGLHVVAFAILLAHRFVSLMVQRS
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA