Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is livH [C]

Identifier: 222527142

GI number: 222527142

Start: 4872498

End: 4873973

Strand: Direct

Name: livH [C]

Synonym: Chy400_3924

Alternate gene names: 222527142

Gene position: 4872498-4873973 (Clockwise)

Preceding gene: 222527141

Following gene: 222527143

Centisome position: 92.48

GC content: 58.88

Gene sequence:

>1476_bases
ATGAATGAATTTATTCGACAGCGACGAGGCTTGCTGGCCGGGATCGGTGCGACATTGATCTTTGCATACTGGGCAGTCAC
CCATTACGAACCGCGTGTTCTCGCCAGTATTCTCCTCTCTGGCCTGACGCTGGGGGCACTCTACTTTTTAGTCACATCTG
GCCTCTCACTGATCTTCGGCCTGATGGATGTACTCAATTTCGCCCATGGGACACTGTTTATGATCGGTGCCTATGTGGGC
TTTACCCTCTACGCCAACCCGCGTTTGTTGCTGAACACTATGCCGTTTGTGCTGGCGTTTGTAGCGGGGTGGCTCCTGAC
GCGCTGGTTCCCCACCAATCGAATGAAGGCACCGCGCTGGTGGTTCTGGCTTGGGGCATTCATCGTGGGCGGGCTGGCAC
TTTGGGGGTTCGAGCTGGCACCGCTGGCCACCACTGCGCTCAGTTCAGGTGGGCGAGTGCCTACTGAGGAAGCGCAGGCG
CCAACTGCTATCTTCATCGGACGAACGGTAGGGTTGAGCGTAGCCGGCTTCATTGCGGGGATCGCCTTTCTGATCGGAAA
GGAACACTCTCGGCCACCAACGAGGGCCGATCTCGTCCTGGGGTTGAGTATGCTTGCGCTGGCATTGATCATCGCACCAT
TCCGCCTCGCTGCCGAAGGCTGGCTATTGAGCATCAACGCAAACATCCGCTTTCTCCTGGCCCTGGTGATCGGGGCCGCC
AGTGGCGCAGCGCTGGGTGGTCTGATGGAATGGAGCCTGATTCGCCCGCTGTACAGCCGGCCTATTTATCAGGTACTGGT
CACACTGGGGCTGGTCTTTGTCGGCACCGAGCTGGTGAAAGGCATCTGGGGGCCGGGTGGCTACTTTATGGAATTGCCCG
AATGGTTTAGCCGTCGCGGACCTGACTGCCCATCACCCAACCTGATCGCCTGGCTCCGCGACAACTGTGCCAGTATTGAC
GTATTGGGGCGACCATTCCCCAGTTATCGCATCTTTATTATTGCCCTGGGCATTGCCATGTTTATCGGCATTGCCCTCCT
CTTACGCCGCACCCGCCTGGGGATGATCATTCGGGCCGGCGTGCAGGACGGCGAAATGGTGCAGGCATTGGGGATCAACG
TTCGCCGCGTCTTCACTCTGGTCTTTGCACTTGGAGCCGGCCTTGCCGCGTTGGGCGGGGTGGCAGCGGCACCATTCCTC
GGTATTAGTCCTGGTTTGGGACAGGAGTTTCAGTTACAGGCCTTTATCGCCGTGGTGATCGGGGGAATGGGCAGCTTCAC
CGGTGCAGCGATGGGTGCGCTGCTGGTGGGGCTGGCGCGCGCCTTTGGCGACCAGATTGTCCTGACCGGCATCCAACTAC
CGTGGATGAGCGAAGCGATCACCTTCTCACCTTCAATTGCGCGCGCTTCAACAGTCTTGATCATGGCGCTGGTGCTCTTG
CTGCGCCCGGCAGGTCTCTTTGGGAAGAAGGAGTAG

Upstream 100 bases:

>100_bases
GGAGCTTAGCGCGTCATCTAATGCAGAGATGACGCTCGTCAGACCGTTGCAAGCGACCGGCACGATGCCGCGCCGTTATC
GTGCCACAGTGAGGAGATCC

Downstream 100 bases:

>100_bases
GCGATGCTGACACGTTTGAAAGCACCACAATGGGCCGGTCTGGCCTTGATCGGCGGTCTGATCGCCTTCCCCTATCTGAT
AGCACTGCTCACCGGGCAGC

Product: inner-membrane translocator

Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]

Alternate protein names: Branched-Chain Amino Acid ABC Transporter Permease Protein; Branched-Chain Amino Acid Transport Permease; Amino Acid Or Sugar ABC Transport System Permease Protein; Branched-Chain Amino Acid ABC Transporter Permease; ABC Transporter Permease Protein; Amino Acid/Amide ABC Transporter Membrane HAAT Family; ABC-Transporter; ABC Transporter Permease; ABC Transporteur Membrane Component; ABC-Type Transport System Permease Protein; Permease Component Of ABC Transporter Protein; Amino Acid ABC Transporter Permease; Membrane Spanning Protein; Branched Chain Amino Acid ABC Transporter

Number of amino acids: Translated: 491; Mature: 491

Protein sequence:

>491_residues
MNEFIRQRRGLLAGIGATLIFAYWAVTHYEPRVLASILLSGLTLGALYFLVTSGLSLIFGLMDVLNFAHGTLFMIGAYVG
FTLYANPRLLLNTMPFVLAFVAGWLLTRWFPTNRMKAPRWWFWLGAFIVGGLALWGFELAPLATTALSSGGRVPTEEAQA
PTAIFIGRTVGLSVAGFIAGIAFLIGKEHSRPPTRADLVLGLSMLALALIIAPFRLAAEGWLLSINANIRFLLALVIGAA
SGAALGGLMEWSLIRPLYSRPIYQVLVTLGLVFVGTELVKGIWGPGGYFMELPEWFSRRGPDCPSPNLIAWLRDNCASID
VLGRPFPSYRIFIIALGIAMFIGIALLLRRTRLGMIIRAGVQDGEMVQALGINVRRVFTLVFALGAGLAALGGVAAAPFL
GISPGLGQEFQLQAFIAVVIGGMGSFTGAAMGALLVGLARAFGDQIVLTGIQLPWMSEAITFSPSIARASTVLIMALVLL
LRPAGLFGKKE

Sequences:

>Translated_491_residues
MNEFIRQRRGLLAGIGATLIFAYWAVTHYEPRVLASILLSGLTLGALYFLVTSGLSLIFGLMDVLNFAHGTLFMIGAYVG
FTLYANPRLLLNTMPFVLAFVAGWLLTRWFPTNRMKAPRWWFWLGAFIVGGLALWGFELAPLATTALSSGGRVPTEEAQA
PTAIFIGRTVGLSVAGFIAGIAFLIGKEHSRPPTRADLVLGLSMLALALIIAPFRLAAEGWLLSINANIRFLLALVIGAA
SGAALGGLMEWSLIRPLYSRPIYQVLVTLGLVFVGTELVKGIWGPGGYFMELPEWFSRRGPDCPSPNLIAWLRDNCASID
VLGRPFPSYRIFIIALGIAMFIGIALLLRRTRLGMIIRAGVQDGEMVQALGINVRRVFTLVFALGAGLAALGGVAAAPFL
GISPGLGQEFQLQAFIAVVIGGMGSFTGAAMGALLVGLARAFGDQIVLTGIQLPWMSEAITFSPSIARASTVLIMALVLL
LRPAGLFGKKE
>Mature_491_residues
MNEFIRQRRGLLAGIGATLIFAYWAVTHYEPRVLASILLSGLTLGALYFLVTSGLSLIFGLMDVLNFAHGTLFMIGAYVG
FTLYANPRLLLNTMPFVLAFVAGWLLTRWFPTNRMKAPRWWFWLGAFIVGGLALWGFELAPLATTALSSGGRVPTEEAQA
PTAIFIGRTVGLSVAGFIAGIAFLIGKEHSRPPTRADLVLGLSMLALALIIAPFRLAAEGWLLSINANIRFLLALVIGAA
SGAALGGLMEWSLIRPLYSRPIYQVLVTLGLVFVGTELVKGIWGPGGYFMELPEWFSRRGPDCPSPNLIAWLRDNCASID
VLGRPFPSYRIFIIALGIAMFIGIALLLRRTRLGMIIRAGVQDGEMVQALGINVRRVFTLVFALGAGLAALGGVAAAPFL
GISPGLGQEFQLQAFIAVVIGGMGSFTGAAMGALLVGLARAFGDQIVLTGIQLPWMSEAITFSPSIARASTVLIMALVLL
LRPAGLFGKKE

Specific function: Part Of The Binding-Protein-Dependent Transport System For Branched-Chain Amino Acids. Probably Responsible For The Translocation Of The Substrates Across The Membrane. [C]

COG id: COG0559

COG function: function code E; Branched-chain amino acid ABC-type transport system, permease components

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52613; Mature: 52613

Theoretical pI: Translated: 10.72; Mature: 10.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEFIRQRRGLLAGIGATLIFAYWAVTHYEPRVLASILLSGLTLGALYFLVTSGLSLIFG
CCHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMDVLNFAHGTLFMIGAYVGFTLYANPRLLLNTMPFVLAFVAGWLLTRWFPTNRMKAPRW
HHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
WFWLGAFIVGGLALWGFELAPLATTALSSGGRVPTEEAQAPTAIFIGRTVGLSVAGFIAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCEEEEECHHHHHHHHHHHH
IAFLIGKEHSRPPTRADLVLGLSMLALALIIAPFRLAAEGWLLSINANIRFLLALVIGAA
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCC
SGAALGGLMEWSLIRPLYSRPIYQVLVTLGLVFVGTELVKGIWGPGGYFMELPEWFSRRG
CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC
PDCPSPNLIAWLRDNCASIDVLGRPFPSYRIFIIALGIAMFIGIALLLRRTRLGMIIRAG
CCCCCCCEEHEECCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
VQDGEMVQALGINVRRVFTLVFALGAGLAALGGVAAAPFLGISPGLGQEFQLQAFIAVVI
CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
GGMGSFTGAAMGALLVGLARAFGDQIVLTGIQLPWMSEAITFSPSIARASTVLIMALVLL
CCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHCCCCHHHHHHHHHHHHHHHH
LRPAGLFGKKE
HCCCCCCCCCC
>Mature Secondary Structure
MNEFIRQRRGLLAGIGATLIFAYWAVTHYEPRVLASILLSGLTLGALYFLVTSGLSLIFG
CCHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMDVLNFAHGTLFMIGAYVGFTLYANPRLLLNTMPFVLAFVAGWLLTRWFPTNRMKAPRW
HHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
WFWLGAFIVGGLALWGFELAPLATTALSSGGRVPTEEAQAPTAIFIGRTVGLSVAGFIAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCEEEEECHHHHHHHHHHHH
IAFLIGKEHSRPPTRADLVLGLSMLALALIIAPFRLAAEGWLLSINANIRFLLALVIGAA
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCC
SGAALGGLMEWSLIRPLYSRPIYQVLVTLGLVFVGTELVKGIWGPGGYFMELPEWFSRRG
CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC
PDCPSPNLIAWLRDNCASIDVLGRPFPSYRIFIIALGIAMFIGIALLLRRTRLGMIIRAG
CCCCCCCEEHEECCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
VQDGEMVQALGINVRRVFTLVFALGAGLAALGGVAAAPFLGISPGLGQEFQLQAFIAVVI
CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
GGMGSFTGAAMGALLVGLARAFGDQIVLTGIQLPWMSEAITFSPSIARASTVLIMALVLL
CCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHCCCCHHHHHHHHHHHHHHHH
LRPAGLFGKKE
HCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]

Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA