Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222527018

Identifier: 222527018

GI number: 222527018

Start: 4729276

End: 4730043

Strand: Reverse

Name: 222527018

Synonym: Chy400_3797

Alternate gene names: NA

Gene position: 4730043-4729276 (Counterclockwise)

Preceding gene: 222527019

Following gene: 222527017

Centisome position: 89.77

GC content: 58.07

Gene sequence:

>768_bases
ATGACAAATCCAGCTTCCTCATCTGAACTCACAGAAGCCAAAAAGGTGGCTCCTGGCCGTCCTGCGCGGATGGTGACACC
GATCACCGAACTCGCTAATCTCCCCCCGGCAATGCCGCTGGGTGCGGTGTTGACCCTGCTGCTCGGTGCGATTCTGGGTG
CCTTTGCTGCGGTGATCGTCCTGCCCACGTGGGCACCAAACCTGAGCGCATCGCTATTGGGTGATGAACCGAAAGCCTAC
TGGTATCTCTCGCGCAGCAGTGCGGTGGTCGCGTATGGGTTGCTCTGGCTGTCGATGATCTTTGGCCTGCTGATGACCAA
TCGCATGGCGCGCTTGTGGCCGGGTGGGCCGGGGGCGTTCGATCTCCATCAACACACCAGCCTGCTCGGATTGGCCTTCG
CCATCTTTCACGCCCTGATCCTGCTCGGTGATCGCTATATCAGCGCCACCCTGCCGCAAATACTCGTACCTTTTGCGTAC
ACCGGCTACGAACCGCTCTGGGTCGGCCTGGGACAACTGACCCTGTACGGTATGTTCATCATTGCCTTCAGTTTCTACGT
CAGGCAGCGGATTGGACAGACGATGTGGCGCCTGATCCATTTTCTCAGTTTTGTCATCTGGCTGCTCAGCCTCCTACACG
CGCTGTACAGTGGGAGCGATACCGATCTCCTGACCGGATGGTACTGGGTGAGCGGCGGCAGTGTGCTCTTGCTGACGATC
TATCGGGTGCTGGTGACGATGGTGCTGAGGAAAAAAGAGCGATTGTAA

Upstream 100 bases:

>100_bases
GACGGTACAGTGATACGCACTGCTACCCTCACCCGCTGCTGCTGGCGTCCGGCTGTTGAATCGGCTGCAAGCCTCTAGTA
TCAACTTAGTGAGGTGTTCC

Downstream 100 bases:

>100_bases
TCATTTCCTTTAGATGTGGAGGTGCCATCCATGAAAGCGTTCCATCACGTGTCAACCCCCACGCTCATTGAAGAGAGCAT
TTATGGTACGTTTCGTGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MTNPASSSELTEAKKVAPGRPARMVTPITELANLPPAMPLGAVLTLLLGAILGAFAAVIVLPTWAPNLSASLLGDEPKAY
WYLSRSSAVVAYGLLWLSMIFGLLMTNRMARLWPGGPGAFDLHQHTSLLGLAFAIFHALILLGDRYISATLPQILVPFAY
TGYEPLWVGLGQLTLYGMFIIAFSFYVRQRIGQTMWRLIHFLSFVIWLLSLLHALYSGSDTDLLTGWYWVSGGSVLLLTI
YRVLVTMVLRKKERL

Sequences:

>Translated_255_residues
MTNPASSSELTEAKKVAPGRPARMVTPITELANLPPAMPLGAVLTLLLGAILGAFAAVIVLPTWAPNLSASLLGDEPKAY
WYLSRSSAVVAYGLLWLSMIFGLLMTNRMARLWPGGPGAFDLHQHTSLLGLAFAIFHALILLGDRYISATLPQILVPFAY
TGYEPLWVGLGQLTLYGMFIIAFSFYVRQRIGQTMWRLIHFLSFVIWLLSLLHALYSGSDTDLLTGWYWVSGGSVLLLTI
YRVLVTMVLRKKERL
>Mature_254_residues
TNPASSSELTEAKKVAPGRPARMVTPITELANLPPAMPLGAVLTLLLGAILGAFAAVIVLPTWAPNLSASLLGDEPKAYW
YLSRSSAVVAYGLLWLSMIFGLLMTNRMARLWPGGPGAFDLHQHTSLLGLAFAIFHALILLGDRYISATLPQILVPFAYT
GYEPLWVGLGQLTLYGMFIIAFSFYVRQRIGQTMWRLIHFLSFVIWLLSLLHALYSGSDTDLLTGWYWVSGGSVLLLTIY
RVLVTMVLRKKERL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28156; Mature: 28025

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNPASSSELTEAKKVAPGRPARMVTPITELANLPPAMPLGAVLTLLLGAILGAFAAVIV
CCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LPTWAPNLSASLLGDEPKAYWYLSRSSAVVAYGLLWLSMIFGLLMTNRMARLWPGGPGAF
HCCCCCCCCHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DLHQHTSLLGLAFAIFHALILLGDRYISATLPQILVPFAYTGYEPLWVGLGQLTLYGMFI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
IAFSFYVRQRIGQTMWRLIHFLSFVIWLLSLLHALYSGSDTDLLTGWYWVSGGSVLLLTI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHH
YRVLVTMVLRKKERL
HHHHHHHHHHHHHCC
>Mature Secondary Structure 
TNPASSSELTEAKKVAPGRPARMVTPITELANLPPAMPLGAVLTLLLGAILGAFAAVIV
CCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LPTWAPNLSASLLGDEPKAYWYLSRSSAVVAYGLLWLSMIFGLLMTNRMARLWPGGPGAF
HCCCCCCCCHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DLHQHTSLLGLAFAIFHALILLGDRYISATLPQILVPFAYTGYEPLWVGLGQLTLYGMFI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
IAFSFYVRQRIGQTMWRLIHFLSFVIWLLSLLHALYSGSDTDLLTGWYWVSGGSVLLLTI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHH
YRVLVTMVLRKKERL
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA