| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is bcc [H]
Identifier: 222526917
GI number: 222526917
Start: 4608082
End: 4608543
Strand: Reverse
Name: bcc [H]
Synonym: Chy400_3695
Alternate gene names: 222526917
Gene position: 4608543-4608082 (Counterclockwise)
Preceding gene: 222526918
Following gene: 222526916
Centisome position: 87.47
GC content: 56.06
Gene sequence:
>462_bases ATGCGCCGTTATCAATTAACAGTTAACGGTAAATCCTACACGGTGGCTGTCACCGAGACGGGAAGTGACCGCTTTATCGT CCAGATCGATGGCCGCGAATTCGAGGTGCAACTGACCGAGAGTGGTGAGGTAAGTGAACCCATACCCCGTTCGGCACCGC TACCGGCTGTATCACCACCGGTACCAAACACTCCAACACCGCCGCCCGCATCGCCCGCACCGTCCATTCCGCCACCAACG ACCGTTAGCGATCAGCTTATTCGAGCACCGATGCCGGGCACAATCTTGCAGATCGTAGTCACCCCTGGTACACGGGTCAA ACGCGGTCAACCGGTCATCGTCCTGGAAGCCATGAAGATGAATAACAGCATCGGTGCGCCACGTGATGGCGTCATTTCTG CCATCCTGGTCAAAACCGGGCAAAGTGTCGGATACGGTGAACCGCTGGCTCAGATTGAATAA
Upstream 100 bases:
>100_bases TCGCAGTTACTGGCCGGGGAGTCTGCTCTTTGCCAGTCGTTGGGTTGCCGCCGGTCGCACGCGCCAGAATCAGAGCTGGC AGCGAAGGAGATAGAACGCT
Downstream 100 bases:
>100_bases CAGAGAATGGAACGATCTATGAGTGAATTGATCGCCAGCATCTTCGCCGGCATTGGTGCGCTTTCCTGGCAATCTCTGGT GATGATAGGGATTGCCGCCC
Product: biotin/lipoyl attachment domain-containing protein
Products: propanoyl-CoA; CO2
Alternate protein names: BCCP [H]
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MRRYQLTVNGKSYTVAVTETGSDRFIVQIDGREFEVQLTESGEVSEPIPRSAPLPAVSPPVPNTPTPPPASPAPSIPPPT TVSDQLIRAPMPGTILQIVVTPGTRVKRGQPVIVLEAMKMNNSIGAPRDGVISAILVKTGQSVGYGEPLAQIE
Sequences:
>Translated_153_residues MRRYQLTVNGKSYTVAVTETGSDRFIVQIDGREFEVQLTESGEVSEPIPRSAPLPAVSPPVPNTPTPPPASPAPSIPPPT TVSDQLIRAPMPGTILQIVVTPGTRVKRGQPVIVLEAMKMNNSIGAPRDGVISAILVKTGQSVGYGEPLAQIE >Mature_153_residues MRRYQLTVNGKSYTVAVTETGSDRFIVQIDGREFEVQLTESGEVSEPIPRSAPLPAVSPPVPNTPTPPPASPAPSIPPPT TVSDQLIRAPMPGTILQIVVTPGTRVKRGQPVIVLEAMKMNNSIGAPRDGVISAILVKTGQSVGYGEPLAQIE
Specific function: This Protein Is A Component Of The Acetyl Coenzyme A Carboxylase Complex; First, Biotin Carboxylase Catalyzes The Carboxylation Of The Carrier Protein And Then The Transcarboxylase Transfers The Carboxyl Group To Form Malonyl-CoA. [C]
COG id: COG0511
COG function: function code I; Biotin carboxyl carrier protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 biotinyl-binding domain [H]
Homologues:
Organism=Homo sapiens, GI189095269, Length=68, Percent_Identity=39.7058823529412, Blast_Score=64, Evalue=5e-11, Organism=Homo sapiens, GI65506442, Length=68, Percent_Identity=39.7058823529412, Blast_Score=64, Evalue=5e-11, Organism=Escherichia coli, GI1789653, Length=138, Percent_Identity=31.8840579710145, Blast_Score=65, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17567343, Length=68, Percent_Identity=44.1176470588235, Blast_Score=63, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001882 - InterPro: IPR000089 - InterPro: IPR011053 [H]
Pfam domain/function: PF00364 Biotin_lipoyl [H]
EC number: 4.1.1.41
Molecular weight: Translated: 16189; Mature: 16189
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: PS50968 BIOTINYL_LIPOYL ; PS00188 BIOTIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRYQLTVNGKSYTVAVTETGSDRFIVQIDGREFEVQLTESGEVSEPIPRSAPLPAVSPP CCEEEEEECCCEEEEEEEECCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCC VPNTPTPPPASPAPSIPPPTTVSDQLIRAPMPGTILQIVVTPGTRVKRGQPVIVLEAMKM CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCEEEEEEEEC NNSIGAPRDGVISAILVKTGQSVGYGEPLAQIE CCCCCCCCCHHEEEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MRRYQLTVNGKSYTVAVTETGSDRFIVQIDGREFEVQLTESGEVSEPIPRSAPLPAVSPP CCEEEEEECCCEEEEEEEECCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCC VPNTPTPPPASPAPSIPPPTTVSDQLIRAPMPGTILQIVVTPGTRVKRGQPVIVLEAMKM CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCEEEEEEEEC NNSIGAPRDGVISAILVKTGQSVGYGEPLAQIE CCCCCCCCCHHEEEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: (S)-methylmalonyl-CoA
Specific reaction: (S)-methylmalonyl-CoA = propanoyl-CoA + CO2
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8431283; 12397186 [H]