Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222526918

Identifier: 222526918

GI number: 222526918

Start: 4608550

End: 4608903

Strand: Reverse

Name: 222526918

Synonym: Chy400_3696

Alternate gene names: NA

Gene position: 4608903-4608550 (Counterclockwise)

Preceding gene: 222526919

Following gene: 222526917

Centisome position: 87.47

GC content: 57.06

Gene sequence:

>354_bases
ATGAATGATTTCAGTTTTGGCCTGACCATCACCGTCACAGGGATGAGTCTGGTGTTTAGTGTCCTGGCATTACTGTGGGG
CATTCTCAACCTGCTCATTCGTTTCGATCAGCCAGCCGCCGCAGAATCGCCAGACCTGACGCCAGAACCCGAACCAGAGG
TAACGACTGCCGGCTCACTTTCAGCGGAAGAACTTGCCGCTATTACCATTGCAGTGCGGCTCCACGCCGCAACCTTACGC
CAGGAAGCTGCACCAACTGTTCGCAGTTACTGGCCGGGGAGTCTGCTCTTTGCCAGTCGTTGGGTTGCCGCCGGTCGCAC
GCGCCAGAATCAGAGCTGGCAGCGAAGGAGATAG

Upstream 100 bases:

>100_bases
ACCACGGCTGATCCGTGCGCTTGAGATTTTGCGCACCAAAGTGCAGCAGAACCCACCCCGTAAACACGGGTTGTACCCAT
CATAAGCTGGGGGCAAGGCG

Downstream 100 bases:

>100_bases
AACGCTATGCGCCGTTATCAATTAACAGTTAACGGTAAATCCTACACGGTGGCTGTCACCGAGACGGGAAGTGACCGCTT
TATCGTCCAGATCGATGGCC

Product: sodium pump decarboxylase subunit gamma

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MNDFSFGLTITVTGMSLVFSVLALLWGILNLLIRFDQPAAAESPDLTPEPEPEVTTAGSLSAEELAAITIAVRLHAATLR
QEAAPTVRSYWPGSLLFASRWVAAGRTRQNQSWQRRR

Sequences:

>Translated_117_residues
MNDFSFGLTITVTGMSLVFSVLALLWGILNLLIRFDQPAAAESPDLTPEPEPEVTTAGSLSAEELAAITIAVRLHAATLR
QEAAPTVRSYWPGSLLFASRWVAAGRTRQNQSWQRRR
>Mature_117_residues
MNDFSFGLTITVTGMSLVFSVLALLWGILNLLIRFDQPAAAESPDLTPEPEPEVTTAGSLSAEELAAITIAVRLHAATLR
QEAAPTVRSYWPGSLLFASRWVAAGRTRQNQSWQRRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12854; Mature: 12854

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDFSFGLTITVTGMSLVFSVLALLWGILNLLIRFDQPAAAESPDLTPEPEPEVTTAGSL
CCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
SAEELAAITIAVRLHAATLRQEAAPTVRSYWPGSLLFASRWVAAGRTRQNQSWQRRR
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MNDFSFGLTITVTGMSLVFSVLALLWGILNLLIRFDQPAAAESPDLTPEPEPEVTTAGSL
CCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
SAEELAAITIAVRLHAATLRQEAAPTVRSYWPGSLLFASRWVAAGRTRQNQSWQRRR
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA