| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is yieO [C]
Identifier: 222526332
GI number: 222526332
Start: 3822724
End: 3824256
Strand: Direct
Name: yieO [C]
Synonym: Chy400_3098
Alternate gene names: 222526332
Gene position: 3822724-3824256 (Clockwise)
Preceding gene: 222526331
Following gene: 222526333
Centisome position: 72.55
GC content: 61.25
Gene sequence:
>1533_bases ATGAAAAATCCTGCCTTGACAACGGTTGAAACCCGTCCGGTCGATCCACGGCTGACCCTGGGGCTGGTCTGTCTGGCAAT CTTCATCGGCGCAGTTGACCTGACGGTGATCAGTGCTGCGTTACCGAAGGTCATGATTGACCTGCGTCTTTCCCTGGATA CGGAGTTGAATCGGGCTTCCTGGGCGGTGAGTGGCTATTTGCTGGCCTACACGGTGAGTATGACCTTTATGGGTCGGCTG TCTGATCTGTTTGGCCGGCGAATGGTGTATCTGATCTGCCTGGTCGTTTTCCTCATCGGTTCAGCCTGGGTGGCAGCCGC GCCGAATCTGACGATGCTGATTATCGGACGGGTGATTCAGGCGTTTGGGGCCGGAGCGATGGTGCCGGTCTCGATGGCCC TGGTTGGCGATCTCTTCCCGCCAGGACAACGGGCAGCCGCGCTCGGTCTGATCGGTGCCGTTGATACCGCCGGATGGATG GTCGGGCATCTCTACGGCGGCGTGCTTATGCGCATCTTTGACGACTGGCGGCTCCTGTTTTGGCTCAACCTGCCTATTGG TCTGGTCGCCCTGGCATTGACGTGGTATGCGCTGCGTCAGGTGCCGACCCCGCCGCGGGTCGGGCGTTTCGATTGGCCGG GCACGCTGTTGTTGAGCGCTAGCCTCGTTGCGTTGAATATCGGTCTGGCTGCCGGGAGCGAACTAGGCGCGACCGATTTC TACGGTGAGCGCCTGGGACCACCGCCCTACGCCGGGCCGCTGGTGATAGTGTCCCTGCTGTTGCTGGCACTCTTCGTTTG GGTCGAGCGCCGTAGTGACGATCCGCTGATTGGCCTGGAACTGTTCACCCACCGTCATACCGCGATGGCCTGCGTGATCA ACGTGATGGTTGGGTTCGGACTGGCAATTGCGATCACGAATGTACCTCTCTACATCAACACCCGTTTGTTGCTGTACCAT CCGACCGATAGCGACATTCTCCGTATCGCCGCCTGGGATGCCGGCTGGATGCTATCAGCATTAACCCTGACAATGGCGGC TGCTGCACTCCCCGGCGGACTGCTCACCGGGCGGTTTGGAGCACGGTTGCCGGCAATGTTGGGCTTAGGACTGGCTATCA TTGGCTATGGCCTGATGGCGTTTTGGGGGCCGGACGCGACCTACCTGCGGATGGGTCTGGAACTGGCGTTGACCGGTATT GGTCTGGGCCTGGTGATTGCGCCGGTCGCCGACACAGTGATTGCCGCTGCCGGTGAAGATCGTCGCGGTGCAGCCTCGGC TCTGGTGATCGCCCTGCGTCTGGTGGGCATGACGGTGGGTGTAGCAATCCTCACCCTGTGGGGCGTTCATCGCCAGGACG AGCTGCGGCGGGCTGGCGCTGACAACCCGCTCGCTGTCACCGAGCCGGCTCGTTTTCTGATGGAGATTGCGGCACGGGTC ATCGGGGAGACATTTCTCTTCGGGGCAGCAGCATGCCTGGTTGGCCTCCTGGCCGCCCTGGTAATGCGAGAGGTATCCGG GCGCCGAACATAG
Upstream 100 bases:
>100_bases TGGTCGATACAGCCACTGACGCCAGTAGCCCCACCACCTGGACGCTTGAGTTCAGTGACTATGACAAAGCGGTTGATGTT CGTGAACCGGTGCAATGTCC
Downstream 100 bases:
>100_bases ATGTGAATTCGTGGTATCATCATCCCATGGTGCCATTTGCTCCGTAAGGACACACTCAATGCACGATGAAGAGATCCAAC GTCTCATTAACCAGTATTTG
Product: major facilitator superfamily protein
Products: Proton [Cytoplasm]; drug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 510; Mature: 510
Protein sequence:
>510_residues MKNPALTTVETRPVDPRLTLGLVCLAIFIGAVDLTVISAALPKVMIDLRLSLDTELNRASWAVSGYLLAYTVSMTFMGRL SDLFGRRMVYLICLVVFLIGSAWVAAAPNLTMLIIGRVIQAFGAGAMVPVSMALVGDLFPPGQRAAALGLIGAVDTAGWM VGHLYGGVLMRIFDDWRLLFWLNLPIGLVALALTWYALRQVPTPPRVGRFDWPGTLLLSASLVALNIGLAAGSELGATDF YGERLGPPPYAGPLVIVSLLLLALFVWVERRSDDPLIGLELFTHRHTAMACVINVMVGFGLAIAITNVPLYINTRLLLYH PTDSDILRIAAWDAGWMLSALTLTMAAAALPGGLLTGRFGARLPAMLGLGLAIIGYGLMAFWGPDATYLRMGLELALTGI GLGLVIAPVADTVIAAAGEDRRGAASALVIALRLVGMTVGVAILTLWGVHRQDELRRAGADNPLAVTEPARFLMEIAARV IGETFLFGAAACLVGLLAALVMREVSGRRT
Sequences:
>Translated_510_residues MKNPALTTVETRPVDPRLTLGLVCLAIFIGAVDLTVISAALPKVMIDLRLSLDTELNRASWAVSGYLLAYTVSMTFMGRL SDLFGRRMVYLICLVVFLIGSAWVAAAPNLTMLIIGRVIQAFGAGAMVPVSMALVGDLFPPGQRAAALGLIGAVDTAGWM VGHLYGGVLMRIFDDWRLLFWLNLPIGLVALALTWYALRQVPTPPRVGRFDWPGTLLLSASLVALNIGLAAGSELGATDF YGERLGPPPYAGPLVIVSLLLLALFVWVERRSDDPLIGLELFTHRHTAMACVINVMVGFGLAIAITNVPLYINTRLLLYH PTDSDILRIAAWDAGWMLSALTLTMAAAALPGGLLTGRFGARLPAMLGLGLAIIGYGLMAFWGPDATYLRMGLELALTGI GLGLVIAPVADTVIAAAGEDRRGAASALVIALRLVGMTVGVAILTLWGVHRQDELRRAGADNPLAVTEPARFLMEIAARV IGETFLFGAAACLVGLLAALVMREVSGRRT >Mature_510_residues MKNPALTTVETRPVDPRLTLGLVCLAIFIGAVDLTVISAALPKVMIDLRLSLDTELNRASWAVSGYLLAYTVSMTFMGRL SDLFGRRMVYLICLVVFLIGSAWVAAAPNLTMLIIGRVIQAFGAGAMVPVSMALVGDLFPPGQRAAALGLIGAVDTAGWM VGHLYGGVLMRIFDDWRLLFWLNLPIGLVALALTWYALRQVPTPPRVGRFDWPGTLLLSASLVALNIGLAAGSELGATDF YGERLGPPPYAGPLVIVSLLLLALFVWVERRSDDPLIGLELFTHRHTAMACVINVMVGFGLAIAITNVPLYINTRLLLYH PTDSDILRIAAWDAGWMLSALTLTMAAAALPGGLLTGRFGARLPAMLGLGLAIIGYGLMAFWGPDATYLRMGLELALTGI GLGLVIAPVADTVIAAAGEDRRGAASALVIALRLVGMTVGVAILTLWGVHRQDELRRAGADNPLAVTEPARFLMEIAARV IGETFLFGAAACLVGLLAALVMREVSGRRT
Specific function: Confers resistance to tetracycline and aminoglycosides such as streptomycin and gentamicin [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI1790195, Length=285, Percent_Identity=29.1228070175439, Blast_Score=106, Evalue=3e-24, Organism=Escherichia coli, GI87081983, Length=424, Percent_Identity=25.7075471698113, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1788710, Length=441, Percent_Identity=24.0362811791383, Blast_Score=98, Evalue=2e-21, Organism=Escherichia coli, GI1789042, Length=443, Percent_Identity=23.7020316027088, Blast_Score=95, Evalue=9e-21, Organism=Escherichia coli, GI1788392, Length=224, Percent_Identity=27.2321428571429, Blast_Score=66, Evalue=6e-12, Organism=Escherichia coli, GI1790146, Length=166, Percent_Identity=28.9156626506024, Blast_Score=64, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6322958, Length=482, Percent_Identity=23.0290456431535, Blast_Score=70, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6323735, Length=345, Percent_Identity=23.768115942029, Blast_Score=68, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6319770, Length=396, Percent_Identity=22.2222222222222, Blast_Score=67, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6324264, Length=136, Percent_Identity=31.6176470588235, Blast_Score=66, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6324954, Length=265, Percent_Identity=23.3962264150943, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 54260; Mature: 54260
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNPALTTVETRPVDPRLTLGLVCLAIFIGAVDLTVISAALPKVMIDLRLSLDTELNRAS CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH WAVSGYLLAYTVSMTFMGRLSDLFGRRMVYLICLVVFLIGSAWVAAAPNLTMLIIGRVIQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHH AFGAGAMVPVSMALVGDLFPPGQRAAALGLIGAVDTAGWMVGHLYGGVLMRIFDDWRLLF HHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE WLNLPIGLVALALTWYALRQVPTPPRVGRFDWPGTLLLSASLVALNIGLAAGSELGATDF EECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHEECHHCCCCCCCCCC YGERLGPPPYAGPLVIVSLLLLALFVWVERRSDDPLIGLELFTHRHTAMACVINVMVGFG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH LAIAITNVPLYINTRLLLYHPTDSDILRIAAWDAGWMLSALTLTMAAAALPGGLLTGRFG HHHHHCCCCEEEEEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCHH ARLPAMLGLGLAIIGYGLMAFWGPDATYLRMGLELALTGIGLGLVIAPVADTVIAAAGED HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RRGAASALVIALRLVGMTVGVAILTLWGVHRQDELRRAGADNPLAVTEPARFLMEIAARV CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEECHHHHHHHHHHHHH IGETFLFGAAACLVGLLAALVMREVSGRRT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKNPALTTVETRPVDPRLTLGLVCLAIFIGAVDLTVISAALPKVMIDLRLSLDTELNRAS CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH WAVSGYLLAYTVSMTFMGRLSDLFGRRMVYLICLVVFLIGSAWVAAAPNLTMLIIGRVIQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHH AFGAGAMVPVSMALVGDLFPPGQRAAALGLIGAVDTAGWMVGHLYGGVLMRIFDDWRLLF HHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE WLNLPIGLVALALTWYALRQVPTPPRVGRFDWPGTLLLSASLVALNIGLAAGSELGATDF EECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHEECHHCCCCCCCCCC YGERLGPPPYAGPLVIVSLLLLALFVWVERRSDDPLIGLELFTHRHTAMACVINVMVGFG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH LAIAITNVPLYINTRLLLYHPTDSDILRIAAWDAGWMLSALTLTMAAAALPGGLLTGRFG HHHHHCCCCEEEEEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCHH ARLPAMLGLGLAIIGYGLMAFWGPDATYLRMGLELALTGIGLGLVIAPVADTVIAAAGED HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RRGAASALVIALRLVGMTVGVAILTLWGVHRQDELRRAGADNPLAVTEPARFLMEIAARV CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEECHHHHHHHHHHHHH IGETFLFGAAACLVGLLAALVMREVSGRRT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; drug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + drug [Cytoplasm] = Proton [Cytoplasm] + drug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]