| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526331
Identifier: 222526331
GI number: 222526331
Start: 3822005
End: 3822727
Strand: Direct
Name: 222526331
Synonym: Chy400_3097
Alternate gene names: NA
Gene position: 3822005-3822727 (Clockwise)
Preceding gene: 222526329
Following gene: 222526332
Centisome position: 72.54
GC content: 58.51
Gene sequence:
>723_bases ATGAAGCATGTCTGGAAATGGCTGATTGCTGGTTCCCTGTTATGGCTGGTGGCCTGTGGTGGTATCGCTTCCCCTCCCAC TCCTACCCCAACTCCTGACCCACGCGCACTGGCGGCTGCTATCGGACAGGCGACGCAGAATAGTCAGAGTGCTCATTTCC GTATTACCCTGAGTGGCAAGCCGGTCGCGCTCGATGCCGGTGGCGTGACTATTCTCAACAGCATCGAAGGTGATTTGCGC CGTCCTGACGCGGTTCTCTCCATTCTCAACATCACCCTTGGCAGTGCAATTGGCGAGATTCGCACCGTCTCGCTGGCCGG TAAACAGTACGCTACCAACCCGATTACCCGCCAGTGGATGTGCTTGCAGGCCGGTTCAACCTTCGATCCGGCAGTGCTGT TCGCACCTGAGATCGGCATCGAAGCGCTGCTGGCGAACGGCTTTACCGATGTGACGCTCGTCGGGATTGAAGAGTTGAAC GGTCGACCACATTACCATCTGCGGGGAACCCTGCCTGCCGATTTGTTGCGTGCGATTAGCCTCAACCTCCTGGGCGCCGG GCCGGTGACCACCGATCTCTGGGCGGATCAAGAGACGCTGCGCGCCAGTCGCGTGGTACTGGTCGATACAGCCACTGACG CCAGTAGCCCCACCACCTGGACGCTTGAGTTCAGTGACTATGACAAAGCGGTTGATGTTCGTGAACCGGTGCAATGTCCA TGA
Upstream 100 bases:
>100_bases TCCCCAGGGCACCGGCGCCGATAATCGCGATCTTCATAGGAATTACCTCTGGTATACTATTCTCACAACCATGGTAGCAC GGCAACTGAAAAGGTGCTTT
Downstream 100 bases:
>100_bases AAAATCCTGCCTTGACAACGGTTGAAACCCGTCCGGTCGATCCACGGCTGACCCTGGGGCTGGTCTGTCTGGCAATCTTC ATCGGCGCAGTTGACCTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MKHVWKWLIAGSLLWLVACGGIASPPTPTPTPDPRALAAAIGQATQNSQSAHFRITLSGKPVALDAGGVTILNSIEGDLR RPDAVLSILNITLGSAIGEIRTVSLAGKQYATNPITRQWMCLQAGSTFDPAVLFAPEIGIEALLANGFTDVTLVGIEELN GRPHYHLRGTLPADLLRAISLNLLGAGPVTTDLWADQETLRASRVVLVDTATDASSPTTWTLEFSDYDKAVDVREPVQCP
Sequences:
>Translated_240_residues MKHVWKWLIAGSLLWLVACGGIASPPTPTPTPDPRALAAAIGQATQNSQSAHFRITLSGKPVALDAGGVTILNSIEGDLR RPDAVLSILNITLGSAIGEIRTVSLAGKQYATNPITRQWMCLQAGSTFDPAVLFAPEIGIEALLANGFTDVTLVGIEELN GRPHYHLRGTLPADLLRAISLNLLGAGPVTTDLWADQETLRASRVVLVDTATDASSPTTWTLEFSDYDKAVDVREPVQCP >Mature_240_residues MKHVWKWLIAGSLLWLVACGGIASPPTPTPTPDPRALAAAIGQATQNSQSAHFRITLSGKPVALDAGGVTILNSIEGDLR RPDAVLSILNITLGSAIGEIRTVSLAGKQYATNPITRQWMCLQAGSTFDPAVLFAPEIGIEALLANGFTDVTLVGIEELN GRPHYHLRGTLPADLLRAISLNLLGAGPVTTDLWADQETLRASRVVLVDTATDASSPTTWTLEFSDYDKAVDVREPVQCP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25527; Mature: 25527
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHVWKWLIAGSLLWLVACGGIASPPTPTPTPDPRALAAAIGQATQNSQSAHFRITLSGK CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCC PVALDAGGVTILNSIEGDLRRPDAVLSILNITLGSAIGEIRTVSLAGKQYATNPITRQWM EEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCEEE CLQAGSTFDPAVLFAPEIGIEALLANGFTDVTLVGIEELNGRPHYHLRGTLPADLLRAIS EEECCCCCCCEEEEECCCCHHHHHHCCCCEEEEEEEECCCCCCCEEEECCCHHHHHHHHH LNLLGAGPVTTDLWADQETLRASRVVLVDTATDASSPTTWTLEFSDYDKAVDVREPVQCP HHEECCCCCCCCCCCCHHHHHHCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MKHVWKWLIAGSLLWLVACGGIASPPTPTPTPDPRALAAAIGQATQNSQSAHFRITLSGK CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCC PVALDAGGVTILNSIEGDLRRPDAVLSILNITLGSAIGEIRTVSLAGKQYATNPITRQWM EEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCEEE CLQAGSTFDPAVLFAPEIGIEALLANGFTDVTLVGIEELNGRPHYHLRGTLPADLLRAIS EEECCCCCCCEEEEECCCCHHHHHHCCCCEEEEEEEECCCCCCCEEEECCCHHHHHHHHH LNLLGAGPVTTDLWADQETLRASRVVLVDTATDASSPTTWTLEFSDYDKAVDVREPVQCP HHEECCCCCCCCCCCCHHHHHHCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA