Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is secA [C]

Identifier: 222526294

GI number: 222526294

Start: 3776866

End: 3777705

Strand: Reverse

Name: secA [C]

Synonym: Chy400_3060

Alternate gene names: 222526294

Gene position: 3777705-3776866 (Counterclockwise)

Preceding gene: 222526295

Following gene: 222526291

Centisome position: 71.7

GC content: 56.31

Gene sequence:

>840_bases
ATGAACCCAGCCAAAACGCTTAAATTAGGCCGCAACGATCCCTGCCACTGTGGTAGTGGGCGCAAATACAAGGATTGCCA
TTTGCGCATCGAAGAGGAATGGCGCAGTCAGCAATTACGCCTGCGCAACGCTCAAGACCAGCTCTTACAACGTATTCTGG
CCAAAGCCACTGAGGCTGAAGCAGCGGAACTACAAACTGCCTTTGATCGATACTGGCAACAGCGTTACCAGTTTGCCCAG
TTGGCCGAACTGAACCAGCGCGAAGGGTACGGGGCCGACCGCTTCATGGTCTGGTTTGCCTTCGACTATCGCCGATCAGA
CGGACAGACACTGGTTGAGCAGATGGTACATCAGATGCAGGAGAGCGATCTATCACCGCTCGAACGACAGCTTCTGCCGA
CGTGGGTCAATGTTCGCTTACGTCCGTACCAGGTTGAGCGACTACATCCCAATGCCGGTGCGACCCTACGTGATCTGCTA
ACCGGCGAGGCGCTGATTCTGGCCGACAGCCATGCCTCATTGCGCCTGGAGCTTGCCGAAGTGATCGTCGGACATCTGGT
GCCAGTTGACACACCACTTGGGCGAACAGCGCCGAACTACTACCTCGCCGGCCCAGCCGCCCACCTGACACCCGACACCG
CCGGGCCAATTCGCACCTTCGCCGACGTTCATCTGGAAGCAATCCGGCGTGAACGTCCTGAAGCCGACTGGCAAACGCTC
CTCAATGAACGGTCGGAGATTTTCAGTCACTTTATTTTGATCTTGCCGACCGACAAACCCGATCCAGACCGGATTCAGAA
CTTTATCGCAGAGACTCGGCAGCGTTTGTTGGGAGAGTGA

Upstream 100 bases:

>100_bases
ACGCTGTGCCTGTCGTTTTCGACTACAACCGACGATGCGCAACCAGTTTCTGGGCATGCGCCTTGCACTAGACCTGGAAT
AATTAAGGAGCATTCGCTTT

Downstream 100 bases:

>100_bases
TTACACCTGTTCAGGATCGTAAATCTCGGCGAGCGGCAGCGTGAAATGAAACGCGCTGCCGCGCCCTGGCATACTCTCGA
CCCAGATTGTGCCCTGATGA

Product: SEC-C motif domain-containing protein

Products: NA

Alternate protein names: SEC-C Motif Domain-Containing Protein

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MNPAKTLKLGRNDPCHCGSGRKYKDCHLRIEEEWRSQQLRLRNAQDQLLQRILAKATEAEAAELQTAFDRYWQQRYQFAQ
LAELNQREGYGADRFMVWFAFDYRRSDGQTLVEQMVHQMQESDLSPLERQLLPTWVNVRLRPYQVERLHPNAGATLRDLL
TGEALILADSHASLRLELAEVIVGHLVPVDTPLGRTAPNYYLAGPAAHLTPDTAGPIRTFADVHLEAIRRERPEADWQTL
LNERSEIFSHFILILPTDKPDPDRIQNFIAETRQRLLGE

Sequences:

>Translated_279_residues
MNPAKTLKLGRNDPCHCGSGRKYKDCHLRIEEEWRSQQLRLRNAQDQLLQRILAKATEAEAAELQTAFDRYWQQRYQFAQ
LAELNQREGYGADRFMVWFAFDYRRSDGQTLVEQMVHQMQESDLSPLERQLLPTWVNVRLRPYQVERLHPNAGATLRDLL
TGEALILADSHASLRLELAEVIVGHLVPVDTPLGRTAPNYYLAGPAAHLTPDTAGPIRTFADVHLEAIRRERPEADWQTL
LNERSEIFSHFILILPTDKPDPDRIQNFIAETRQRLLGE
>Mature_279_residues
MNPAKTLKLGRNDPCHCGSGRKYKDCHLRIEEEWRSQQLRLRNAQDQLLQRILAKATEAEAAELQTAFDRYWQQRYQFAQ
LAELNQREGYGADRFMVWFAFDYRRSDGQTLVEQMVHQMQESDLSPLERQLLPTWVNVRLRPYQVERLHPNAGATLRDLL
TGEALILADSHASLRLELAEVIVGHLVPVDTPLGRTAPNYYLAGPAAHLTPDTAGPIRTFADVHLEAIRRERPEADWQTL
LNERSEIFSHFILILPTDKPDPDRIQNFIAETRQRLLGE

Specific function: Involved In Protein Export. Interacts With The Secy/Sece Subunits. Seca Has A Central Role In Coupling The Hydrolysis Of ATP To The Transfer Of Pre-Secretory Periplasmic And Outer Membrane Proteins Across The Membrane. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm Side Of Plasma Membrane [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32214; Mature: 32214

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPAKTLKLGRNDPCHCGSGRKYKDCHLRIEEEWRSQQLRLRNAQDQLLQRILAKATEAE
CCCHHCEECCCCCCCCCCCCCCCCHHHEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
AAELQTAFDRYWQQRYQFAQLAELNQREGYGADRFMVWFAFDYRRSDGQTLVEQMVHQMQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHH
ESDLSPLERQLLPTWVNVRLRPYQVERLHPNAGATLRDLLTGEALILADSHASLRLELAE
HCCCCHHHHHHCCHHHCCEECEEEEEEECCCCCCHHHHHHCCCEEEEECCCCHHHHHHHH
VIVGHLVPVDTPLGRTAPNYYLAGPAAHLTPDTAGPIRTFADVHLEAIRRERPEADWQTL
HHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH
LNERSEIFSHFILILPTDKPDPDRIQNFIAETRQRLLGE
HHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNPAKTLKLGRNDPCHCGSGRKYKDCHLRIEEEWRSQQLRLRNAQDQLLQRILAKATEAE
CCCHHCEECCCCCCCCCCCCCCCCHHHEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
AAELQTAFDRYWQQRYQFAQLAELNQREGYGADRFMVWFAFDYRRSDGQTLVEQMVHQMQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHH
ESDLSPLERQLLPTWVNVRLRPYQVERLHPNAGATLRDLLTGEALILADSHASLRLELAE
HCCCCHHHHHHCCHHHCCEECEEEEEEECCCCCCHHHHHHCCCEEEEECCCCHHHHHHHH
VIVGHLVPVDTPLGRTAPNYYLAGPAAHLTPDTAGPIRTFADVHLEAIRRERPEADWQTL
HHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH
LNERSEIFSHFILILPTDKPDPDRIQNFIAETRQRLLGE
HHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA