| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526274
Identifier: 222526274
GI number: 222526274
Start: 3749410
End: 3751014
Strand: Reverse
Name: 222526274
Synonym: Chy400_3040
Alternate gene names: NA
Gene position: 3751014-3749410 (Counterclockwise)
Preceding gene: 222526278
Following gene: 222526271
Centisome position: 71.19
GC content: 56.64
Gene sequence:
>1605_bases ATGCAGCAACGGCAACGGCTCGGTGTGGTCACCGGCGGTTCGCTTCAAGAGGGTTTAACGGTACGACTCGATGCCGGTAC GTCGGTTGAAGATATGCGCGTTGGTAAGTTCGTGGTCGTGAAGGGCCAGCGCTTCACATTTTTCTCGATGGTGACCGATG TCCGGCTTGGGGCAACCACACCAAAGGTGATGATCGATCCACCGCCAGCCGACGAGTTTTTTGCCAGTGTGCTCAGCGGT ACCACGACCTATGGCGAACTTCGGCTCGATCTTCGCCTGATGCTGCCTCTCGACGGAGACGCTGATTTATTGCCGGTTAA AACAGTGCCACCTCATTTCGCCCCACTCTACGAGGCCAGCGAAGCTGACTTCACGCAGGTGTTTGGCCAGGAAGAGGGGA GCCGGTTTATGATCGGAACGCCGCTCGATATGGCGGTGCCGGTATGTATCGACCTGAATCGCCTGGTCGAGCGCTCGAAC GGCGTCTTTGGGAAGAGTGGTACCGGCAAGAGCTTTCTGACCCGCCTGCTGGTGTGCGGCGTGATTCTGAGCGACGTGGC CTCTAATCTGATCTTCGATATGCACAATGAATATGGATGGACGGCCCGCTCAGAAGGGAGTCATTTTGTTAAGGGGTTGC GTCAGCTCTTCGGAAGCCGCGTCCTGGTGTACAGTCTGGCCGATAGCGCGTTCAATCACGGGCAGATCGATGGCGAGATT GTGATCGGCTACAATCAGATCGAACCGGAAGATGTGCTGTTGTTGAGCGAAGAGCTGAATCTCAATCCCACTGCTGCCGA GACAGCCGAATTACTGGTTGACGAGTACCGCGCTCAATGGCTGGCGGCGTTGTGGGAGATGGATCAGGAAGCCTTGAAGG CATTTGCCGAACAGAAGAGCGCCAGTCTGGCCTCGCTACAAGCCCTCAAGCGCAAGACCTTGCAATTGAAACGTCTCGGC TTTGTTCGGGATCAGGCGGATCTATCGCCCGTCGATCATCTCATTAATGCGCTGATGGCCGGACGGCACGTAGTGTTGAG TTTTGGTCGTTACGATGATCCATTAGCCTACATGCTGGTTGCCAACATCCTCACCCGGCGCATCCACCAGCGCTGGCGCG AACAAACCGAACGCTATCTTCAGACTAAAAATGAAGCAGATCGCCCGCGCCCGCTCATGATCACTATCGAAGAAGCGCAC AAATTCCTTAACCCACGCCTGGCGCGACAAACCATCTTCGGTACGATTGCCCGCGAAATGCGCAAGTATAGCGTCACCCT GCTGGTCGTTGATCAGCGGCCCTCTTCTATCGACAGCGAGGTACTCAGCCAGCTCGGTACGCGCATCACCGCTCTCCTGA GTGATGAACACGATATAGACGCCGTATTCACCGGTGTCGGCGGTAGCGCCCGGCTCCGCGCTGTGCTGGCCAACCTCGAC ACCCGCCAGCAGGCACTTGTGCTTGGCCACGCAGTACCCATGCCGGTCGTGGTGCAAACCCGTGCCTACGATGAACAGTT TTACCGCTATATCGAGCAACGCACCCGGCGTGCAGTTGATCTGGTACAGGCCCAGCAAGAGGTGGATGAGCTATTTCCAG ATTGA
Upstream 100 bases:
>100_bases AAATTTCCGCGTTCATCATTCGGTTCATCTTTTTGTAATAAGCTCTCCCACGCCGACCTGTGTTAAGATCAGTTACGGGC ATACGGTGAAGGAGGTTCAT
Downstream 100 bases:
>100_bases TACCAATGGAGGGGTTATGCGACTCACCTCCACCCCGGCCTCACTCCCGCAGTGCGGGAGCGGGGAGAACGGCGAGCTGC ACTGGGACGTTCTGATGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: ATPase; Conserved Domain Protein; P-Loop ATPase
Number of amino acids: Translated: 534; Mature: 534
Protein sequence:
>534_residues MQQRQRLGVVTGGSLQEGLTVRLDAGTSVEDMRVGKFVVVKGQRFTFFSMVTDVRLGATTPKVMIDPPPADEFFASVLSG TTTYGELRLDLRLMLPLDGDADLLPVKTVPPHFAPLYEASEADFTQVFGQEEGSRFMIGTPLDMAVPVCIDLNRLVERSN GVFGKSGTGKSFLTRLLVCGVILSDVASNLIFDMHNEYGWTARSEGSHFVKGLRQLFGSRVLVYSLADSAFNHGQIDGEI VIGYNQIEPEDVLLLSEELNLNPTAAETAELLVDEYRAQWLAALWEMDQEALKAFAEQKSASLASLQALKRKTLQLKRLG FVRDQADLSPVDHLINALMAGRHVVLSFGRYDDPLAYMLVANILTRRIHQRWREQTERYLQTKNEADRPRPLMITIEEAH KFLNPRLARQTIFGTIAREMRKYSVTLLVVDQRPSSIDSEVLSQLGTRITALLSDEHDIDAVFTGVGGSARLRAVLANLD TRQQALVLGHAVPMPVVVQTRAYDEQFYRYIEQRTRRAVDLVQAQQEVDELFPD
Sequences:
>Translated_534_residues MQQRQRLGVVTGGSLQEGLTVRLDAGTSVEDMRVGKFVVVKGQRFTFFSMVTDVRLGATTPKVMIDPPPADEFFASVLSG TTTYGELRLDLRLMLPLDGDADLLPVKTVPPHFAPLYEASEADFTQVFGQEEGSRFMIGTPLDMAVPVCIDLNRLVERSN GVFGKSGTGKSFLTRLLVCGVILSDVASNLIFDMHNEYGWTARSEGSHFVKGLRQLFGSRVLVYSLADSAFNHGQIDGEI VIGYNQIEPEDVLLLSEELNLNPTAAETAELLVDEYRAQWLAALWEMDQEALKAFAEQKSASLASLQALKRKTLQLKRLG FVRDQADLSPVDHLINALMAGRHVVLSFGRYDDPLAYMLVANILTRRIHQRWREQTERYLQTKNEADRPRPLMITIEEAH KFLNPRLARQTIFGTIAREMRKYSVTLLVVDQRPSSIDSEVLSQLGTRITALLSDEHDIDAVFTGVGGSARLRAVLANLD TRQQALVLGHAVPMPVVVQTRAYDEQFYRYIEQRTRRAVDLVQAQQEVDELFPD >Mature_534_residues MQQRQRLGVVTGGSLQEGLTVRLDAGTSVEDMRVGKFVVVKGQRFTFFSMVTDVRLGATTPKVMIDPPPADEFFASVLSG TTTYGELRLDLRLMLPLDGDADLLPVKTVPPHFAPLYEASEADFTQVFGQEEGSRFMIGTPLDMAVPVCIDLNRLVERSN GVFGKSGTGKSFLTRLLVCGVILSDVASNLIFDMHNEYGWTARSEGSHFVKGLRQLFGSRVLVYSLADSAFNHGQIDGEI VIGYNQIEPEDVLLLSEELNLNPTAAETAELLVDEYRAQWLAALWEMDQEALKAFAEQKSASLASLQALKRKTLQLKRLG FVRDQADLSPVDHLINALMAGRHVVLSFGRYDDPLAYMLVANILTRRIHQRWREQTERYLQTKNEADRPRPLMITIEEAH KFLNPRLARQTIFGTIAREMRKYSVTLLVVDQRPSSIDSEVLSQLGTRITALLSDEHDIDAVFTGVGGSARLRAVLANLD TRQQALVLGHAVPMPVVVQTRAYDEQFYRYIEQRTRRAVDLVQAQQEVDELFPD
Specific function: Unknown
COG id: COG0433
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59771; Mature: 59771
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQRQRLGVVTGGSLQEGLTVRLDAGTSVEDMRVGKFVVVKGQRFTFFSMVTDVRLGATT CCCCHHCCEEECCCCCCCCEEEEECCCCCCCEECCEEEEEECCCEEHHHHHHHHHCCCCC PKVMIDPPPADEFFASVLSGTTTYGELRLDLRLMLPLDGDADLLPVKTVPPHFAPLYEAS CEEEECCCCHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCCCEEEECCCCCCCCCCCCCC EADFTQVFGQEEGSRFMIGTPLDMAVPVCIDLNRLVERSNGVFGKSGTGKSFLTRLLVCG CCHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH VILSDVASNLIFDMHNEYGWTARSEGSHFVKGLRQLFGSRVLVYSLADSAFNHGQIDGEI HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEEHHHHCCCCCCCCCEE VIGYNQIEPEDVLLLSEELNLNPTAAETAELLVDEYRAQWLAALWEMDQEALKAFAEQKS EEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASLASLQALKRKTLQLKRLGFVRDQADLSPVDHLINALMAGRHVVLSFGRYDDPLAYMLV HHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHH ANILTRRIHQRWREQTERYLQTKNEADRPRPLMITIEEAHKFLNPRLARQTIFGTIAREM HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHCHHHHHHHHHHHHHHHH RKYSVTLLVVDQRPSSIDSEVLSQLGTRITALLSDEHDIDAVFTGVGGSARLRAVLANLD HHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHCCC TRQQALVLGHAVPMPVVVQTRAYDEQFYRYIEQRTRRAVDLVQAQQEVDELFPD CHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQQRQRLGVVTGGSLQEGLTVRLDAGTSVEDMRVGKFVVVKGQRFTFFSMVTDVRLGATT CCCCHHCCEEECCCCCCCCEEEEECCCCCCCEECCEEEEEECCCEEHHHHHHHHHCCCCC PKVMIDPPPADEFFASVLSGTTTYGELRLDLRLMLPLDGDADLLPVKTVPPHFAPLYEAS CEEEECCCCHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCCCEEEECCCCCCCCCCCCCC EADFTQVFGQEEGSRFMIGTPLDMAVPVCIDLNRLVERSNGVFGKSGTGKSFLTRLLVCG CCHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH VILSDVASNLIFDMHNEYGWTARSEGSHFVKGLRQLFGSRVLVYSLADSAFNHGQIDGEI HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEEHHHHCCCCCCCCCEE VIGYNQIEPEDVLLLSEELNLNPTAAETAELLVDEYRAQWLAALWEMDQEALKAFAEQKS EEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASLASLQALKRKTLQLKRLGFVRDQADLSPVDHLINALMAGRHVVLSFGRYDDPLAYMLV HHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHH ANILTRRIHQRWREQTERYLQTKNEADRPRPLMITIEEAHKFLNPRLARQTIFGTIAREM HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHCHHHHHHHHHHHHHHHH RKYSVTLLVVDQRPSSIDSEVLSQLGTRITALLSDEHDIDAVFTGVGGSARLRAVLANLD HHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHCCC TRQQALVLGHAVPMPVVVQTRAYDEQFYRYIEQRTRRAVDLVQAQQEVDELFPD CHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA