| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is gph [C]
Identifier: 222526278
GI number: 222526278
Start: 3754299
End: 3755030
Strand: Reverse
Name: gph [C]
Synonym: Chy400_3044
Alternate gene names: 222526278
Gene position: 3755030-3754299 (Counterclockwise)
Preceding gene: 222526281
Following gene: 222526274
Centisome position: 71.27
GC content: 59.29
Gene sequence:
>732_bases ATGGGCATGAAGAGACAACACCGTTTTCGCGCAATCCTGTTCGATCTTGACGGCACACTGACCGATCCCTTCACCGGTAT TGCCCGCAGCGTCAATTATGCCCTGCAACGGCTAGGGCATCCACTCCTCAGCGACGACGAGCTTCGGCGCTGGATTGGGC CTCCCTTGCACGCCTCGTTCGAGCAACTGCTTGACGACCCACGGTTAGCCGATCAGGCGGTGGCTCACTATCGGCAACGC TATTGGGAAACCGGCCTGTACGAGAACACCGTCTTCCCTGGCATTCCCGAACTCCTGTCTGACCTCAAAGCCGCAGGCAT CCGGCTCTTCGTCGCCACCTCGAAAATTCGTCCGCCTACCGAACGGATTCTGGCCCACTTTGGGCTGCAACCCTTCTTCG AGGCAATCGCTGCCGTCGATCCCGATGACCGCGATGGCAACAAGGCAATGGTCATCGGCACCCTCTTACCAACGCTCGGT GCTGATCGCGCCTGGACGGTGATGGTGGGGGATACGATCTTCGACATCCACGGCGCACGTGCCCATCGGATGCCCTGTAT TGCGGTGACCTATGGATATGGGGAGTACCGTGATCTCTACCTTGCCGCCCCGCTCGCCCTGGCTAGCACGGTGGGTACAT TGCGAGAGTTATTGAGCGCGGATGATCCACATTCGGTCAGATACCGTCATTCACGGCCCGGCACGGGAAGCCAACATGAT CCTACAGCGTAG
Upstream 100 bases:
>100_bases CAGGCGTCTCAGATGCATATCTCGGTTATTCAGACCGGATGAGAGTATTATAACACCGTTTCCCGGCGTTTGCCGGGTAG CACGGTTTTTGCGTTATACT
Downstream 100 bases:
>100_bases CGAAGTGAGTTTGTGCGAAGAGTATTGGAAGAGACCAGAACAGAGATCATGGTAGGCTGAACATCGACATCAGACGTAGT CGAAGCGGGACATGAACATC
Product: HAD-superfamily hydrolase
Products: NA
Alternate protein names: Nucleoside 5'-monophosphate phosphohydrolase [H]
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MGMKRQHRFRAILFDLDGTLTDPFTGIARSVNYALQRLGHPLLSDDELRRWIGPPLHASFEQLLDDPRLADQAVAHYRQR YWETGLYENTVFPGIPELLSDLKAAGIRLFVATSKIRPPTERILAHFGLQPFFEAIAAVDPDDRDGNKAMVIGTLLPTLG ADRAWTVMVGDTIFDIHGARAHRMPCIAVTYGYGEYRDLYLAAPLALASTVGTLRELLSADDPHSVRYRHSRPGTGSQHD PTA
Sequences:
>Translated_243_residues MGMKRQHRFRAILFDLDGTLTDPFTGIARSVNYALQRLGHPLLSDDELRRWIGPPLHASFEQLLDDPRLADQAVAHYRQR YWETGLYENTVFPGIPELLSDLKAAGIRLFVATSKIRPPTERILAHFGLQPFFEAIAAVDPDDRDGNKAMVIGTLLPTLG ADRAWTVMVGDTIFDIHGARAHRMPCIAVTYGYGEYRDLYLAAPLALASTVGTLRELLSADDPHSVRYRHSRPGTGSQHD PTA >Mature_242_residues GMKRQHRFRAILFDLDGTLTDPFTGIARSVNYALQRLGHPLLSDDELRRWIGPPLHASFEQLLDDPRLADQAVAHYRQRY WETGLYENTVFPGIPELLSDLKAAGIRLFVATSKIRPPTERILAHFGLQPFFEAIAAVDPDDRDGNKAMVIGTLLPTLGA DRAWTVMVGDTIFDIHGARAHRMPCIAVTYGYGEYRDLYLAAPLALASTVGTLRELLSADDPHSVRYRHSRPGTGSQHDP TA
Specific function: Specifically dephosphorylates nucleoside 5'- monophosphates to nucleosides and inorganic phosphate. Displays high activity toward 5'-UMP and 5'-IMP, significant activity against 5'-XMP and 5'-TMP, and low activity against 5'-CMP [H]
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily [H]
Homologues:
Organism=Escherichia coli, GI1789787, Length=248, Percent_Identity=27.4193548387097, Blast_Score=72, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =3.1.3.5 [H]
Molecular weight: Translated: 27101; Mature: 26970
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMKRQHRFRAILFDLDGTLTDPFTGIARSVNYALQRLGHPLLSDDELRRWIGPPLHASF CCCCHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHH EQLLDDPRLADQAVAHYRQRYWETGLYENTVFPGIPELLSDLKAAGIRLFVATSKIRPPT HHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCHH ERILAHFGLQPFFEAIAAVDPDDRDGNKAMVIGTLLPTLGADRAWTVMVGDTIFDIHGAR HHHHHHHCHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHCCCCCEEEEEECCEEEECCCCH AHRMPCIAVTYGYGEYRDLYLAAPLALASTVGTLRELLSADDPHSVRYRHSRPGTGSQHD HHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCC PTA CCC >Mature Secondary Structure GMKRQHRFRAILFDLDGTLTDPFTGIARSVNYALQRLGHPLLSDDELRRWIGPPLHASF CCCHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHH EQLLDDPRLADQAVAHYRQRYWETGLYENTVFPGIPELLSDLKAAGIRLFVATSKIRPPT HHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCHH ERILAHFGLQPFFEAIAAVDPDDRDGNKAMVIGTLLPTLGADRAWTVMVGDTIFDIHGAR HHHHHHHCHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHCCCCCEEEEEECCEEEECCCCH AHRMPCIAVTYGYGEYRDLYLAAPLALASTVGTLRELLSADDPHSVRYRHSRPGTGSQHD HHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCC PTA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]