Click here to switch to the map view.

The map label for this gene is 222526185

Identifier: 222526185

GI number: 222526185

Start: 3636194

End: 3637726

Strand: Direct

Name: 222526185

Synonym: Chy400_2944

Alternate gene names: NA

Gene position: 3636194-3637726 (Clockwise)

Preceding gene: 222526178

Following gene: 222526186

Centisome position: 69.01

GC content: 53.69

Gene sequence:

>1533_bases
GTGACAGAGCTACTCTGGGCCGTCGTCGCCCTGCTGGCAGGGCTGGCTGGCGGTGCAGGCATAGGTGTCTGGTGGGCGAA
CAATGGCGTCAGCTCACTGGTCCAACGTAAAGCTGCCGAAGCCCGCCTGTTAATTGAAGAGGCGCGTTCGCAGCAAAAAG
AAATCCTCTTGCAAGCAAAAGATGAAGCGTTACGGATTCGAAACGAAGCTGAAGCCGAGTTACGTGAATCGCGCCAGAGC
TTGCAAAAACAGGAAGAACGTCTGCAACGTAAAGAGGAAAATATCGATCGTAAATTAGAAGGGATCGAGCGTCGTGAGCG
GCTGATCCAGCAGCGCGAGCGTCAGATTGAACAGTTGACGCAAGAAGCTGAACGGTTAAAGCGCCAACAGGCGCAAGAGC
TAGAGCGAATTTCGCAGTTATCGCGTGAAGAAGCGCGCTCAATTATTCTGGCCGAAGTTGAGCGTGAAACACGTGAAGAT
GCAGCCCGGCGCATCCGTGAACTCGAACAGCAAACGAAAGAGGAGGCCGATAAAATTGCCCGTAAAATTATCGGTCTGGC
CATTCAGCGCTGCGCGAGTGATTACGTTGCAGAAATGACCGTCTCAACGGTGAACCTGCCGAGTGAAGAACTGAAAGGGC
GCATCATTGGTCGTGAAGGACGCAATATTCGCGCCTTCGAGCAGATCACCGGTGTTGATATTATTGTTGATGATACCCCT
GAAGCGGTGACTCTCTCGTGCCACGATCCGGTACGTCGGGAAGTAGCACGAGTGGCGCTGTTGAAGTTGTTGAAGGATGG
CCGGATCCATCCTTCCCGTATCGAGGAGGTGGTTCACAAGACACAACTCGAGATCGAGCAGATTATGCGCGAAGAAGGTG
AGCGTGTCGCTTACGAAGCGAATGTGCAGGGGTTGCACCCCGATCTGATTAAGCTGCTCGGTCGTTTGAAATATCGCACC
AGTTATGGGCAAAATGTTTTGCAACATTCGCTAGAATGTGCCTTACTGGCAGCCCATATGGCTGCTGAATTGGGTGCCAA
TGTCAATATTGCCAAGACCGCTGCGTTGTTGCACGACATCGGTAAAGCGGTTGATCACGAGGTTCAGGGTCCGCACGCTC
TGATTGGTGCCGAAATTGCCCGGCGTCTTGGGCGGTCGGCGGCAATCGTGCACGCCATCGCAGCACATCACTACGATGAA
GAACCGCAAACCGTCGAAGCCTTTCTTGTGATTGCCGCTGATGCAATTTCTGGTGCCCGTCCTGGTGCACGTCGCGAAAC
GCTTGATCTGTACATCAAGCGGCTGGAGGCTCTCGAAACCGTTGCTACATCATTCCCCGGCGTCCAGCGTGCGTTTGCTG
TGCAGGCCGGTCGTGAGGTGCGGGTGATGGTGCAACCCGATCAAATTGACGATCTGGCCAGTATCCATCTGGCTCGCAAT
GTGGCTAAGAAGATCGAAGAGAGTCTGCAATATCCTGGTCAGATCAAAGTGACGATTATCCGCGAAACCCGCGCCGTTGA
TTATGCACGGTGA

Upstream 100 bases:

>100_bases
TGTATGGATTGAAAATCCACAGTTACAATATCTATCTGCATATCGTCGGTCATACTTCCATCCGGCGTCGTGCACATTAA
CAACTGCATAGGAGGCTACC

Downstream 100 bases:

>100_bases
TGTTTGGCCAGATACACCCAAATTTGGTGATATTTTGGTCTACACATCACGATAACGTGTGGTACAATTACAACACGCTT
TCGATCGTCGGCTATAGGGT

Product: phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 510; Mature: 509

Protein sequence:

>510_residues
MTELLWAVVALLAGLAGGAGIGVWWANNGVSSLVQRKAAEARLLIEEARSQQKEILLQAKDEALRIRNEAEAELRESRQS
LQKQEERLQRKEENIDRKLEGIERRERLIQQRERQIEQLTQEAERLKRQQAQELERISQLSREEARSIILAEVERETRED
AARRIRELEQQTKEEADKIARKIIGLAIQRCASDYVAEMTVSTVNLPSEELKGRIIGREGRNIRAFEQITGVDIIVDDTP
EAVTLSCHDPVRREVARVALLKLLKDGRIHPSRIEEVVHKTQLEIEQIMREEGERVAYEANVQGLHPDLIKLLGRLKYRT
SYGQNVLQHSLECALLAAHMAAELGANVNIAKTAALLHDIGKAVDHEVQGPHALIGAEIARRLGRSAAIVHAIAAHHYDE
EPQTVEAFLVIAADAISGARPGARRETLDLYIKRLEALETVATSFPGVQRAFAVQAGREVRVMVQPDQIDDLASIHLARN
VAKKIEESLQYPGQIKVTIIRETRAVDYAR

Sequences:

>Translated_510_residues
MTELLWAVVALLAGLAGGAGIGVWWANNGVSSLVQRKAAEARLLIEEARSQQKEILLQAKDEALRIRNEAEAELRESRQS
LQKQEERLQRKEENIDRKLEGIERRERLIQQRERQIEQLTQEAERLKRQQAQELERISQLSREEARSIILAEVERETRED
AARRIRELEQQTKEEADKIARKIIGLAIQRCASDYVAEMTVSTVNLPSEELKGRIIGREGRNIRAFEQITGVDIIVDDTP
EAVTLSCHDPVRREVARVALLKLLKDGRIHPSRIEEVVHKTQLEIEQIMREEGERVAYEANVQGLHPDLIKLLGRLKYRT
SYGQNVLQHSLECALLAAHMAAELGANVNIAKTAALLHDIGKAVDHEVQGPHALIGAEIARRLGRSAAIVHAIAAHHYDE
EPQTVEAFLVIAADAISGARPGARRETLDLYIKRLEALETVATSFPGVQRAFAVQAGREVRVMVQPDQIDDLASIHLARN
VAKKIEESLQYPGQIKVTIIRETRAVDYAR
>Mature_509_residues
TELLWAVVALLAGLAGGAGIGVWWANNGVSSLVQRKAAEARLLIEEARSQQKEILLQAKDEALRIRNEAEAELRESRQSL
QKQEERLQRKEENIDRKLEGIERRERLIQQRERQIEQLTQEAERLKRQQAQELERISQLSREEARSIILAEVERETREDA
ARRIRELEQQTKEEADKIARKIIGLAIQRCASDYVAEMTVSTVNLPSEELKGRIIGREGRNIRAFEQITGVDIIVDDTPE
AVTLSCHDPVRREVARVALLKLLKDGRIHPSRIEEVVHKTQLEIEQIMREEGERVAYEANVQGLHPDLIKLLGRLKYRTS
YGQNVLQHSLECALLAAHMAAELGANVNIAKTAALLHDIGKAVDHEVQGPHALIGAEIARRLGRSAAIVHAIAAHHYDEE
PQTVEAFLVIAADAISGARPGARRETLDLYIKRLEALETVATSFPGVQRAFAVQAGREVRVMVQPDQIDDLASIHLARNV
AKKIEESLQYPGQIKVTIIRETRAVDYAR

Specific function: Catalyzes the hydrolysis of both 2',3'-cyclic AMP and 2',3'-cyclic GMP into 3'-AMP and 3'-GMP, respectively, at the 3'- terminal of RNA [H]

COG id: COG1418

COG function: function code R; Predicted HD superfamily hydrolase

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017705
- InterPro:   IPR022711
- InterPro:   IPR004087
- InterPro:   IPR004088
- InterPro:   IPR018111
- InterPro:   IPR003607
- InterPro:   IPR006675 [H]

Pfam domain/function: PF12072 DUF3552; PF00013 KH_1 [H]

EC number: =3.1.4.16 [H]

Molecular weight: Translated: 57402; Mature: 57271

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: PS50084 KH_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTELLWAVVALLAGLAGGAGIGVWWANNGVSSLVQRKAAEARLLIEEARSQQKEILLQAK
CHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DEALRIRNEAEAELRESRQSLQKQEERLQRKEENIDRKLEGIERRERLIQQRERQIEQLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QEAERLKRQQAQELERISQLSREEARSIILAEVERETREDAARRIRELEQQTKEEADKIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKIIGLAIQRCASDYVAEMTVSTVNLPSEELKGRIIGREGRNIRAFEQITGVDIIVDDTP
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEECCCCCCCHHHHHHCCCEEEEECCC
EAVTLSCHDPVRREVARVALLKLLKDGRIHPSRIEEVVHKTQLEIEQIMREEGERVAYEA
CEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC
NVQGLHPDLIKLLGRLKYRTSYGQNVLQHSLECALLAAHMAAELGANVNIAKTAALLHDI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
GKAVDHEVQGPHALIGAEIARRLGRSAAIVHAIAAHHYDEEPQTVEAFLVIAADAISGAR
HHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC
PGARRETLDLYIKRLEALETVATSFPGVQRAFAVQAGREVRVMVQPDQIDDLASIHLARN
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHH
VAKKIEESLQYPGQIKVTIIRETRAVDYAR
HHHHHHHHHCCCCCEEEEEEECCCCCCCCC
>Mature Secondary Structure 
TELLWAVVALLAGLAGGAGIGVWWANNGVSSLVQRKAAEARLLIEEARSQQKEILLQAK
HHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DEALRIRNEAEAELRESRQSLQKQEERLQRKEENIDRKLEGIERRERLIQQRERQIEQLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QEAERLKRQQAQELERISQLSREEARSIILAEVERETREDAARRIRELEQQTKEEADKIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKIIGLAIQRCASDYVAEMTVSTVNLPSEELKGRIIGREGRNIRAFEQITGVDIIVDDTP
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEECCCCCCCHHHHHHCCCEEEEECCC
EAVTLSCHDPVRREVARVALLKLLKDGRIHPSRIEEVVHKTQLEIEQIMREEGERVAYEA
CEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC
NVQGLHPDLIKLLGRLKYRTSYGQNVLQHSLECALLAAHMAAELGANVNIAKTAALLHDI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
GKAVDHEVQGPHALIGAEIARRLGRSAAIVHAIAAHHYDEEPQTVEAFLVIAADAISGAR
HHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC
PGARRETLDLYIKRLEALETVATSFPGVQRAFAVQAGREVRVMVQPDQIDDLASIHLARN
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHH
VAKKIEESLQYPGQIKVTIIRETRAVDYAR
HHHHHHHHHCCCCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA