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The map label for this gene is 222526178

Identifier: 222526178

GI number: 222526178

Start: 3630318

End: 3631382

Strand: Direct

Name: 222526178

Synonym: Chy400_2937

Alternate gene names: NA

Gene position: 3630318-3631382 (Clockwise)

Preceding gene: 222526177

Following gene: 222526185

Centisome position: 68.9

GC content: 57.28

Gene sequence:

>1065_bases
ATGGCGTACTATCAACGAGAACTGGCGCCCAATGTACCGCCGCTAAGTGCCCGCCGACCGCTCATCAACGAGTATTTTCT
CTCGGCCTATACGATGAGCGTTTATACCGGCTGTGAATTGGGCTGTCCCTATTGCGATAGCTGGGTGTACAACGAACGCC
CGCTCAACGAGACGATTGCGATCCCGGTTGATCTGCCGCAACGTCTGGCAGCAGCGTTGCCAAAGATTGATCGTGGTGAT
CTGATTGCGATCAGCGCCTTGAGCGATCCCTATCAACCGGCTGAGCAGACCTATCGGATTACCCGCCAGGTCTTGCAGCT
TTTTGCCGAACACGGTCAGCCATGTCTGATTATGACCAAGAGTCCACTCGTGCTGGAAGATCGCTCACTGTTGCAAAAGA
TGAACGAGCGTAGTCTGGCGGTGGTGGTAACGACGTTGCTGACCCTGGATCAGCATCTGGCGACGCGCCTTGAAGGACGG
GCACCGTCACCCCAACTCCGCCTGGAGATGCTTGCCGAGCTGAAACGGGCGGGTATTCCGGTTGGCGTGGCCTTGTTGCC
GGTGATGCCCTATGTGAACGACAGCAACCTCAATCTGCGACGGGTATTGCACGCCTGTGCTGAGGTTGGGGTTGATTTTG
TGGTGTGGGATTATCTCCACATCCCAAATGAACGGCATCGTCATCGGATCAACGTGCTGCTCAGTCAGTTAGGCTCGTAC
CCACCGCGCTACTATCGCGATGTCTATCGCGATCAGGCCACCGTCAATCCGATCTATCGTCATGATCGTGATCGCGAGTT
ATTGCAACGGTGCGATGAGCTAGGGCTGGCACCGCGCGCACCGCACCAGCTCTACGCCGGAAAACTCTCGCCACGGAATG
AAGCGGCGTTGCTGCTGCGACACGCGGCGTTTCGTGATCGATTGCAGGGGAGGGAACGACTGGCCCATCTGCACCGTGAA
CTGGCCGATGCCATCTTCCAGGGTCGTTTTCGGGCTGCCGATCTGCGCCAGAGTCCACTCTACCCGACGGTTGGACCGTT
ACTTGGACTCCCAACCACCACTTGA

Upstream 100 bases:

>100_bases
CGACTGGTCGCAACCAATGGTCTGATCCATGCCGAGCTACTGGCAGCCCTGGCTGAGGTTCGGCGTCAACGTTCGCTGAA
ATTGTCGTAGTTGGGTTGGT

Downstream 100 bases:

>100_bases
TCGACCTGTTGACGTAGCCGTTCGTGCAATTGTCGGCGTAGCTCACGGAGACGCTCCTTATAACTCGTCGTTGTGATGGG
GTCTGTCCACATCACCAGAG

Product: Radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 353

Protein sequence:

>354_residues
MAYYQRELAPNVPPLSARRPLINEYFLSAYTMSVYTGCELGCPYCDSWVYNERPLNETIAIPVDLPQRLAAALPKIDRGD
LIAISALSDPYQPAEQTYRITRQVLQLFAEHGQPCLIMTKSPLVLEDRSLLQKMNERSLAVVVTTLLTLDQHLATRLEGR
APSPQLRLEMLAELKRAGIPVGVALLPVMPYVNDSNLNLRRVLHACAEVGVDFVVWDYLHIPNERHRHRINVLLSQLGSY
PPRYYRDVYRDQATVNPIYRHDRDRELLQRCDELGLAPRAPHQLYAGKLSPRNEAALLLRHAAFRDRLQGRERLAHLHRE
LADAIFQGRFRAADLRQSPLYPTVGPLLGLPTTT

Sequences:

>Translated_354_residues
MAYYQRELAPNVPPLSARRPLINEYFLSAYTMSVYTGCELGCPYCDSWVYNERPLNETIAIPVDLPQRLAAALPKIDRGD
LIAISALSDPYQPAEQTYRITRQVLQLFAEHGQPCLIMTKSPLVLEDRSLLQKMNERSLAVVVTTLLTLDQHLATRLEGR
APSPQLRLEMLAELKRAGIPVGVALLPVMPYVNDSNLNLRRVLHACAEVGVDFVVWDYLHIPNERHRHRINVLLSQLGSY
PPRYYRDVYRDQATVNPIYRHDRDRELLQRCDELGLAPRAPHQLYAGKLSPRNEAALLLRHAAFRDRLQGRERLAHLHRE
LADAIFQGRFRAADLRQSPLYPTVGPLLGLPTTT
>Mature_353_residues
AYYQRELAPNVPPLSARRPLINEYFLSAYTMSVYTGCELGCPYCDSWVYNERPLNETIAIPVDLPQRLAAALPKIDRGDL
IAISALSDPYQPAEQTYRITRQVLQLFAEHGQPCLIMTKSPLVLEDRSLLQKMNERSLAVVVTTLLTLDQHLATRLEGRA
PSPQLRLEMLAELKRAGIPVGVALLPVMPYVNDSNLNLRRVLHACAEVGVDFVVWDYLHIPNERHRHRINVLLSQLGSYP
PRYYRDVYRDQATVNPIYRHDRDRELLQRCDELGLAPRAPHQLYAGKLSPRNEAALLLRHAAFRDRLQGRERLAHLHREL
ADAIFQGRFRAADLRQSPLYPTVGPLLGLPTTT

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 40334; Mature: 40203

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYYQRELAPNVPPLSARRPLINEYFLSAYTMSVYTGCELGCPYCDSWVYNERPLNETIA
CCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEE
IPVDLPQRLAAALPKIDRGDLIAISALSDPYQPAEQTYRITRQVLQLFAEHGQPCLIMTK
EECCCHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEC
SPLVLEDRSLLQKMNERSLAVVVTTLLTLDQHLATRLEGRAPSPQLRLEMLAELKRAGIP
CCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
VGVALLPVMPYVNDSNLNLRRVLHACAEVGVDFVVWDYLHIPNERHRHRINVLLSQLGSY
HHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHEEHHHHHCCCHHHHHHHHHHHHHHCCC
PPRYYRDVYRDQATVNPIYRHDRDRELLQRCDELGLAPRAPHQLYAGKLSPRNEAALLLR
CCHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCCHHHHHHHH
HAAFRDRLQGRERLAHLHRELADAIFQGRFRAADLRQSPLYPTVGPLLGLPTTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHCCCCCCC
>Mature Secondary Structure 
AYYQRELAPNVPPLSARRPLINEYFLSAYTMSVYTGCELGCPYCDSWVYNERPLNETIA
CCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEE
IPVDLPQRLAAALPKIDRGDLIAISALSDPYQPAEQTYRITRQVLQLFAEHGQPCLIMTK
EECCCHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEC
SPLVLEDRSLLQKMNERSLAVVVTTLLTLDQHLATRLEGRAPSPQLRLEMLAELKRAGIP
CCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
VGVALLPVMPYVNDSNLNLRRVLHACAEVGVDFVVWDYLHIPNERHRHRINVLLSQLGSY
HHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHEEHHHHHCCCHHHHHHHHHHHHHHCCC
PPRYYRDVYRDQATVNPIYRHDRDRELLQRCDELGLAPRAPHQLYAGKLSPRNEAALLLR
CCHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCCHHHHHHHH
HAAFRDRLQGRERLAHLHRELADAIFQGRFRAADLRQSPLYPTVGPLLGLPTTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]