Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222525902

Identifier: 222525902

GI number: 222525902

Start: 3288775

End: 3289086

Strand: Reverse

Name: 222525902

Synonym: Chy400_2657

Alternate gene names: NA

Gene position: 3289086-3288775 (Counterclockwise)

Preceding gene: 222525903

Following gene: 222525901

Centisome position: 62.42

GC content: 48.08

Gene sequence:

>312_bases
GTGAAACTACTGCTCGACACTCACAGTTTCATTTGGTTCATAGAAGATAACCTGTCCCTCAGTCTCCGTGCTCGTACATT
GATTGAGGAGCCAACCAGTGAAGTGCTTCTCAGTGTGGCGAGCGTTTGGGAGATGGCTATCAAAGTCAGCCTGGGGCGGC
TTCAATTGAGCCAGCCCTTCGAGCTGTTTATACCCCATCAACTGCTACTGAACGATATTACTCTGCTCGACATCACTCTC
AATCACACTCTGAAGATTGCAACGTTACCATTTCATCATCGCGATCCGTTTGATCGTCTGCTGATTGCGTAA

Upstream 100 bases:

>100_bases
AACAGGTCAGACAGCCACGTCGTCCTGGTAGTGCCAGAGGTATGATCCGTATGACGGATGACTTCGATGCGCCGCTGGAA
GATTTTCAGGAATATACAGT

Downstream 100 bases:

>100_bases
GGTCTGGTTGAAGGAATTCCAATCATTAGTGCCGATAGTATTTTCGATATGTATGGCATGAGTCGGCTCTGGTAGGGTGA
AGAATGAGCCTGACCAGTAA

Product: PilT protein domain-containing protein

Products: NA

Alternate protein names: PilT Protein Domain Protein; PilT Protein-Like Protein; PilT Protein Domain-Containing Protein; PilT Protein-Like; PIN Domain Protein

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MKLLLDTHSFIWFIEDNLSLSLRARTLIEEPTSEVLLSVASVWEMAIKVSLGRLQLSQPFELFIPHQLLLNDITLLDITL
NHTLKIATLPFHHRDPFDRLLIA

Sequences:

>Translated_103_residues
MKLLLDTHSFIWFIEDNLSLSLRARTLIEEPTSEVLLSVASVWEMAIKVSLGRLQLSQPFELFIPHQLLLNDITLLDITL
NHTLKIATLPFHHRDPFDRLLIA
>Mature_103_residues
MKLLLDTHSFIWFIEDNLSLSLRARTLIEEPTSEVLLSVASVWEMAIKVSLGRLQLSQPFELFIPHQLLLNDITLLDITL
NHTLKIATLPFHHRDPFDRLLIA

Specific function: Unknown

COG id: COG3744

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11899; Mature: 11899

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLLDTHSFIWFIEDNLSLSLRARTLIEEPTSEVLLSVASVWEMAIKVSLGRLQLSQPF
CEEEEECCEEEEEEECCCEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHEECEEECCCCC
ELFIPHQLLLNDITLLDITLNHTLKIATLPFHHRDPFDRLLIA
EEECCHHHHHCCEEEEEEEECCEEEEEEECCCCCCCHHHHCCC
>Mature Secondary Structure
MKLLLDTHSFIWFIEDNLSLSLRARTLIEEPTSEVLLSVASVWEMAIKVSLGRLQLSQPF
CEEEEECCEEEEEEECCCEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHEECEEECCCCC
ELFIPHQLLLNDITLLDITLNHTLKIATLPFHHRDPFDRLLIA
EEECCHHHHHCCEEEEEEEECCEEEEEEECCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA