| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525871
Identifier: 222525871
GI number: 222525871
Start: 3261074
End: 3261622
Strand: Reverse
Name: 222525871
Synonym: Chy400_2624
Alternate gene names: NA
Gene position: 3261622-3261074 (Counterclockwise)
Preceding gene: 222525872
Following gene: 222525870
Centisome position: 61.9
GC content: 56.83
Gene sequence:
>549_bases ATGCAGCGACTATTTGTGTTCTTGCTGGTGATCCTGGCGGCGTGTAGCCAGTCAACACCCGCAACCCCAATGAGTGGCAT GGATCACTCAACAATGCCGATGGCCCATGGCAATGAGCCATATGATGCCCTGTTCATTGATAGCATGATCGTCCATCACG AAGGCGCGGTCACAATGGCCCGCCAGGCCTTGCAAGAGAGTCAGCGTGCCGAGATTCGGCAACTGGCCGAGGCGATTATC GCGACCCAGGAAGCCGAGATTGCCCAGATGAAAGCATGGCGACAGGAATGGTATCCCGATCTGCCACCAACCGCCGGTAT GGCGATGGAGATGGGGCCAATGACAGTTGCCGAGGGTGATGCACCGTTTGACCAGCGTTTTATCGAAGCGATGATTCCTC ACCACGAGGGTGCGATTGCAATGGCTCGTGATGCGCTGGAAAAGGCCGAACATGCCGAGATCAAGGCGCTGGCCGAGGCG ATTATTTCTGCTCAGGAGGCCGAAATTGCTCAGATGCGCGAGTGGCTGCGCACGTGGTTCGGCAAATAG
Upstream 100 bases:
>100_bases TCTAAGCAATCATTAAACCACACTTGAACAAATCTTGAGCTTCATTCTGCATACTGGCTCTGCTGAAGTCGGTAATGACG TGTATATGCAGAGGTGGTAG
Downstream 100 bases:
>100_bases CAACATGTTCCTGTGACCGGATAAAGAGACCACATGCGAGCAGTGTCGGGCGGTAAATCAGCTTCATCTGTGACTGAACA GCGCAAGGCACTGCTCTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MQRLFVFLLVILAACSQSTPATPMSGMDHSTMPMAHGNEPYDALFIDSMIVHHEGAVTMARQALQESQRAEIRQLAEAII ATQEAEIAQMKAWRQEWYPDLPPTAGMAMEMGPMTVAEGDAPFDQRFIEAMIPHHEGAIAMARDALEKAEHAEIKALAEA IISAQEAEIAQMREWLRTWFGK
Sequences:
>Translated_182_residues MQRLFVFLLVILAACSQSTPATPMSGMDHSTMPMAHGNEPYDALFIDSMIVHHEGAVTMARQALQESQRAEIRQLAEAII ATQEAEIAQMKAWRQEWYPDLPPTAGMAMEMGPMTVAEGDAPFDQRFIEAMIPHHEGAIAMARDALEKAEHAEIKALAEA IISAQEAEIAQMREWLRTWFGK >Mature_182_residues MQRLFVFLLVILAACSQSTPATPMSGMDHSTMPMAHGNEPYDALFIDSMIVHHEGAVTMARQALQESQRAEIRQLAEAII ATQEAEIAQMKAWRQEWYPDLPPTAGMAMEMGPMTVAEGDAPFDQRFIEAMIPHHEGAIAMARDALEKAEHAEIKALAEA IISAQEAEIAQMREWLRTWFGK
Specific function: Unknown
COG id: COG3544
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20278; Mature: 20278
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 8.2 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 8.2 %Met (Mature Protein) 8.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRLFVFLLVILAACSQSTPATPMSGMDHSTMPMAHGNEPYDALFIDSMIVHHEGAVTMA CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHH RQALQESQRAEIRQLAEAIIATQEAEIAQMKAWRQEWYPDLPPTAGMAMEMGPMTVAEGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCEEECCC APFDQRFIEAMIPHHEGAIAMARDALEKAEHAEIKALAEAIISAQEAEIAQMREWLRTWF CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GK CC >Mature Secondary Structure MQRLFVFLLVILAACSQSTPATPMSGMDHSTMPMAHGNEPYDALFIDSMIVHHEGAVTMA CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHH RQALQESQRAEIRQLAEAIIATQEAEIAQMKAWRQEWYPDLPPTAGMAMEMGPMTVAEGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCEEECCC APFDQRFIEAMIPHHEGAIAMARDALEKAEHAEIKALAEAIISAQEAEIAQMREWLRTWF CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA