| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525784
Identifier: 222525784
GI number: 222525784
Start: 3189112
End: 3190254
Strand: Direct
Name: 222525784
Synonym: Chy400_2537
Alternate gene names: NA
Gene position: 3189112-3190254 (Clockwise)
Preceding gene: 222525780
Following gene: 222525785
Centisome position: 60.53
GC content: 60.1
Gene sequence:
>1143_bases ATGCTCATGATACGTTCACTAGCTGCCGGCCTGCGCATCTACCTTCTCATCGCAACCCTGATACTGCTCAGCGGACTCCA GTTCTTCCTACCGCGCCTGCCTCGACCGATCAACCTGCCACCATCACGCACGGTAGCGACGACCAATCCTCTCATCGGCG TTCATACCCGTCTCACCGGCATCGGCGACGAAGCCTACATCCGACGTACTCTGGCCCAGGTCAACGAGATGGGGGCAAGC TGGATCGTAGAACTCTTTCCCTGGGCCTACATTCAGCCCCGTTCACGTTACGGTTTCGACTGGACAGGTGCCGATCTGGT GATTGCCCACGCCAGAGCGCAGGGTCTCAATGTCGTGGCCCGCCTCGACATCGTACCGGCCTGGGCACGCCCACCCAACA CCACCGATCGTTACCTTGATCGTGCCCACTTTGCCGATTTTGCCCATTTTGCGGCGGCGTTTGCCGAACGCTACGCTCCG CAGGGCGTGCGTCATATCATCATCTGGAACGAACCCAACTTACGGTTCGAGTGGGGTGAACGACCGCCCGATCCCGGTGC ATACACCGATCTGCTCAAACAGACCTACCCGGCGATCAAAGCAGCCGCACCAGAGGCCATCGTCATCGCCGGCGCACTAT CGCCTGGCCCCAGCCTGGAAGGCGGCAATCTGCGCATGGACGATATGCAATTCCTGGCCTCGCTCGCCGACGCTGGAGCA TTCCCCTTTTTCGACATGTGGGCCGTCCACGCCTACGGCGGCCAGGAACCGCCAGATGCTGAACCCGGCGTTGACCGGGT CAATTTTCGCCGCATCGAACTGGTACGCGAACTACTCGACCGCCTGGGCGGCAGCGACAAGCGCATCATCATCACCGAAG GCGGCTACAACGACCATCCGCGTTGGAGTGGTGCAGTGCGTCCTGCTGATCGGATACGCTGGACAATCGCCACCTACGAA CAATCACGCCACTATCCCTGGCTGGAAGCCACCATCCTCTGGCAATTCAGCACACCATTTCTCACCCGCTCGTATCCCGA TGCCTGGAACTTCGTGCATCCCGATGGCACACCGCGGGCGATTTACCTGGCAGTACAGGAATATGCTCGTACCGGTAGGC TACCGGATGACGTGGAGAAGTGA
Upstream 100 bases:
>100_bases GTGTGCAATGGATGGTTTTTCAGATGTGATCTCATCCTCTCAAAATTTGATCTGAGTGGTACAATACCTGTGTCCAATTA CTCGTACACCTGCTGCCAAC
Downstream 100 bases:
>100_bases TCATCTTGATCTATATCGTGTGTTGATGGCGATGATTCTATTGACGACGCTCTGATTTCTGATACCATTCTCTTATGCTT CAAATAAAACCTGTCTCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MLMIRSLAAGLRIYLLIATLILLSGLQFFLPRLPRPINLPPSRTVATTNPLIGVHTRLTGIGDEAYIRRTLAQVNEMGAS WIVELFPWAYIQPRSRYGFDWTGADLVIAHARAQGLNVVARLDIVPAWARPPNTTDRYLDRAHFADFAHFAAAFAERYAP QGVRHIIIWNEPNLRFEWGERPPDPGAYTDLLKQTYPAIKAAAPEAIVIAGALSPGPSLEGGNLRMDDMQFLASLADAGA FPFFDMWAVHAYGGQEPPDAEPGVDRVNFRRIELVRELLDRLGGSDKRIIITEGGYNDHPRWSGAVRPADRIRWTIATYE QSRHYPWLEATILWQFSTPFLTRSYPDAWNFVHPDGTPRAIYLAVQEYARTGRLPDDVEK
Sequences:
>Translated_380_residues MLMIRSLAAGLRIYLLIATLILLSGLQFFLPRLPRPINLPPSRTVATTNPLIGVHTRLTGIGDEAYIRRTLAQVNEMGAS WIVELFPWAYIQPRSRYGFDWTGADLVIAHARAQGLNVVARLDIVPAWARPPNTTDRYLDRAHFADFAHFAAAFAERYAP QGVRHIIIWNEPNLRFEWGERPPDPGAYTDLLKQTYPAIKAAAPEAIVIAGALSPGPSLEGGNLRMDDMQFLASLADAGA FPFFDMWAVHAYGGQEPPDAEPGVDRVNFRRIELVRELLDRLGGSDKRIIITEGGYNDHPRWSGAVRPADRIRWTIATYE QSRHYPWLEATILWQFSTPFLTRSYPDAWNFVHPDGTPRAIYLAVQEYARTGRLPDDVEK >Mature_380_residues MLMIRSLAAGLRIYLLIATLILLSGLQFFLPRLPRPINLPPSRTVATTNPLIGVHTRLTGIGDEAYIRRTLAQVNEMGAS WIVELFPWAYIQPRSRYGFDWTGADLVIAHARAQGLNVVARLDIVPAWARPPNTTDRYLDRAHFADFAHFAAAFAERYAP QGVRHIIIWNEPNLRFEWGERPPDPGAYTDLLKQTYPAIKAAAPEAIVIAGALSPGPSLEGGNLRMDDMQFLASLADAGA FPFFDMWAVHAYGGQEPPDAEPGVDRVNFRRIELVRELLDRLGGSDKRIIITEGGYNDHPRWSGAVRPADRIRWTIATYE QSRHYPWLEATILWQFSTPFLTRSYPDAWNFVHPDGTPRAIYLAVQEYARTGRLPDDVEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42824; Mature: 42824
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMIRSLAAGLRIYLLIATLILLSGLQFFLPRLPRPINLPPSRTVATTNPLIGVHTRLTG CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCEEEEEEEEEC IGDEAYIRRTLAQVNEMGASWIVELFPWAYIQPRSRYGFDWTGADLVIAHARAQGLNVVA CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCEEEEEHHCCCCEEEE RLDIVPAWARPPNTTDRYLDRAHFADFAHFAAAFAERYAPQGVRHIIIWNEPNLRFEWGE EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCC RPPDPGAYTDLLKQTYPAIKAAAPEAIVIAGALSPGPSLEGGNLRMDDMQFLASLADAGA CCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCC FPFFDMWAVHAYGGQEPPDAEPGVDRVNFRRIELVRELLDRLGGSDKRIIITEGGYNDHP CCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC RWSGAVRPADRIRWTIATYEQSRHYPWLEATILWQFSTPFLTRSYPDAWNFVHPDGTPRA CCCCCCCCHHHEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCE IYLAVQEYARTGRLPDDVEK EEEEEHHHHHCCCCCHHCCC >Mature Secondary Structure MLMIRSLAAGLRIYLLIATLILLSGLQFFLPRLPRPINLPPSRTVATTNPLIGVHTRLTG CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCEEEEEEEEEC IGDEAYIRRTLAQVNEMGASWIVELFPWAYIQPRSRYGFDWTGADLVIAHARAQGLNVVA CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCEEEEEHHCCCCEEEE RLDIVPAWARPPNTTDRYLDRAHFADFAHFAAAFAERYAPQGVRHIIIWNEPNLRFEWGE EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCC RPPDPGAYTDLLKQTYPAIKAAAPEAIVIAGALSPGPSLEGGNLRMDDMQFLASLADAGA CCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCC FPFFDMWAVHAYGGQEPPDAEPGVDRVNFRRIELVRELLDRLGGSDKRIIITEGGYNDHP CCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC RWSGAVRPADRIRWTIATYEQSRHYPWLEATILWQFSTPFLTRSYPDAWNFVHPDGTPRA CCCCCCCCHHHEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCE IYLAVQEYARTGRLPDDVEK EEEEEHHHHHCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA