| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525780
Identifier: 222525780
GI number: 222525780
Start: 3182268
End: 3183497
Strand: Direct
Name: 222525780
Synonym: Chy400_2533
Alternate gene names: NA
Gene position: 3182268-3183497 (Clockwise)
Preceding gene: 222525779
Following gene: 222525784
Centisome position: 60.4
GC content: 58.54
Gene sequence:
>1230_bases ATGCGCATGTTGATGATTACCTATGGTAGTCGGGGTGACGTACAGCCCTTTATTGCGCTTGGTGCTGCGTTGTATCGGGC CGGTCACACCCCTGTTCTGGCTGCACCCGCACGTTTTGCATCCCTTGCGGCTGATCATCACATCACATTTCTGCCTCTGC CCGGCAATGTTGAGGTACTGGCTCGTCAGATCGCCGATGAGTCACGCCAGCAACCGCTGCGTCTGATTGGCATCATCTCC CGTTTTGCATTACCGTTGGGCATTGAAGTAGCCCGGCGTATTCAAGCAGCGGCTCGCTCCGCCGACATGATCGTCCATTC ATTTTTGACCGTCGCTCTCGGTCATCTCTACGCAACCCAATACGGGTTGCCTGAATGTGCCGTCGATCTCTTTCCCTTCT TCGACCCGCCAGCCGACATCGCCAACATTGCGTGGCCTACTGATCGGATTGGATTGGCCGGTCGTCGGCTCAGCCATGTC TTTGCCCACACCATCTTTCGTTATACCCAAAGCCTGAGCTACCGCATCCTCCACCGCCGAGCGCCTGATATTGGGCCATC ACGCTTGCCATGGGCGGCACCGGGACGCCAGTTTGGATTGTTACAAGCCTACAGTGCCGTTCTGGTTCCGCCGGGGTCTG CCCCGCTGACAGTGCAAACCGGTTCGTGGTGGTTAGAAGCGACGAACTGGCAACCGCCGCCTGATCTGCAAGCCTTTCTG GCTGCTGGCCCACCACCGGTAGTGATTAGCTTTGGCAGTATGGCTACGCATGATGCTCCACACATTGCGCGCATCGTGCT GGAAACGCTTCAGCGTACCGGACAACGCGGCATTATTCAGCGCGGATGGGCGGGTCTTACGCCACATCAGGTTCCTGATA CCATCTATCTCGCCGATGAAATGCCACACGACTGGCTGTTGCCCCGTGCCAGCGCAATGATCCATCACGGTGGCGCAGGC ACTACAGCGAGTGCCCTCCGCGCCGGCATTCCATCGGTGATCGTTCCCTTCGCTGCCGATCAGCCGTTCTGGGCCTGGCG TGCGCACAAGACCGGTGCCAACCCACCACCAATCCCGGTGTCGGCATTATCGGTTGAGCGATTGAGCTTAGCGTTGCAGC AAGCGCTTGATCCGGTACATCGTGCTCGCGCTGCGATGGTCAGTGGTCGCATGCGTGCCGAGGGTGGTGTCGCTGTTGCT GTTCAGCGTATTGAACAATGGGCAGCGTAG
Upstream 100 bases:
>100_bases AAGGGTTGCTTTGGCAATTTGACCAGGAATACCTGCGGGTGATGGGAGAGCAAAGCGCATGATGGTGCAGGAATCGGGTA TTGTTATCTAACGAGACAGT
Downstream 100 bases:
>100_bases TAGTCAGTTTTGGGTGAATGGAATGTCGAGTTGATGAACAGGTGGGTTGGTGAGCGACTGGTTAAGGAGGCTGGCGGGTT AAGGGATCGGCGGGTTAAAA
Product: glycosyl transferase family 2 protein8
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MRMLMITYGSRGDVQPFIALGAALYRAGHTPVLAAPARFASLAADHHITFLPLPGNVEVLARQIADESRQQPLRLIGIIS RFALPLGIEVARRIQAAARSADMIVHSFLTVALGHLYATQYGLPECAVDLFPFFDPPADIANIAWPTDRIGLAGRRLSHV FAHTIFRYTQSLSYRILHRRAPDIGPSRLPWAAPGRQFGLLQAYSAVLVPPGSAPLTVQTGSWWLEATNWQPPPDLQAFL AAGPPPVVISFGSMATHDAPHIARIVLETLQRTGQRGIIQRGWAGLTPHQVPDTIYLADEMPHDWLLPRASAMIHHGGAG TTASALRAGIPSVIVPFAADQPFWAWRAHKTGANPPPIPVSALSVERLSLALQQALDPVHRARAAMVSGRMRAEGGVAVA VQRIEQWAA
Sequences:
>Translated_409_residues MRMLMITYGSRGDVQPFIALGAALYRAGHTPVLAAPARFASLAADHHITFLPLPGNVEVLARQIADESRQQPLRLIGIIS RFALPLGIEVARRIQAAARSADMIVHSFLTVALGHLYATQYGLPECAVDLFPFFDPPADIANIAWPTDRIGLAGRRLSHV FAHTIFRYTQSLSYRILHRRAPDIGPSRLPWAAPGRQFGLLQAYSAVLVPPGSAPLTVQTGSWWLEATNWQPPPDLQAFL AAGPPPVVISFGSMATHDAPHIARIVLETLQRTGQRGIIQRGWAGLTPHQVPDTIYLADEMPHDWLLPRASAMIHHGGAG TTASALRAGIPSVIVPFAADQPFWAWRAHKTGANPPPIPVSALSVERLSLALQQALDPVHRARAAMVSGRMRAEGGVAVA VQRIEQWAA >Mature_409_residues MRMLMITYGSRGDVQPFIALGAALYRAGHTPVLAAPARFASLAADHHITFLPLPGNVEVLARQIADESRQQPLRLIGIIS RFALPLGIEVARRIQAAARSADMIVHSFLTVALGHLYATQYGLPECAVDLFPFFDPPADIANIAWPTDRIGLAGRRLSHV FAHTIFRYTQSLSYRILHRRAPDIGPSRLPWAAPGRQFGLLQAYSAVLVPPGSAPLTVQTGSWWLEATNWQPPPDLQAFL AAGPPPVVISFGSMATHDAPHIARIVLETLQRTGQRGIIQRGWAGLTPHQVPDTIYLADEMPHDWLLPRASAMIHHGGAG TTASALRAGIPSVIVPFAADQPFWAWRAHKTGANPPPIPVSALSVERLSLALQQALDPVHRARAAMVSGRMRAEGGVAVA VQRIEQWAA
Specific function: Unknown
COG id: COG1819
COG function: function code GC; Glycosyl transferases, related to UDP-glucuronosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.leprae L518_C2_147 and M.tuberculosis Rv1524 [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6323218, Length=431, Percent_Identity=28.538283062645, Blast_Score=156, Evalue=5e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004276 [H]
Pfam domain/function: PF03033 Glyco_transf_28 [H]
EC number: NA
Molecular weight: Translated: 44324; Mature: 44324
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: PS01076 ACETATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMLMITYGSRGDVQPFIALGAALYRAGHTPVLAAPARFASLAADHHITFLPLPGNVEVL CEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEECHHHHHHHHCCCCEEEEECCCCHHHH ARQIADESRQQPLRLIGIISRFALPLGIEVARRIQAAARSADMIVHSFLTVALGHLYATQ HHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YGLPECAVDLFPFFDPPADIANIAWPTDRIGLAGRRLSHVFAHTIFRYTQSLSYRILHRR CCCCHHHHHHCCCCCCCCCHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC APDIGPSRLPWAAPGRQFGLLQAYSAVLVPPGSAPLTVQTGSWWLEATNWQPPPDLQAFL CCCCCCCCCCCCCCCCHHHHHHHCCEEEECCCCCCEEEECCCEEEEECCCCCCCCHHHHH AAGPPPVVISFGSMATHDAPHIARIVLETLQRTGQRGIIQRGWAGLTPHQVPDTIYLADE HCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCEEEEECC MPHDWLLPRASAMIHHGGAGTTASALRAGIPSVIVPFAADQPFWAWRAHKTGANPPPIPV CCCHHCCCCHHHHEECCCCCCHHHHHHCCCCCEEEECCCCCCCEEEECCCCCCCCCCCCH SALSVERLSLALQQALDPVHRARAAMVSGRMRAEGGVAVAVQRIEQWAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MRMLMITYGSRGDVQPFIALGAALYRAGHTPVLAAPARFASLAADHHITFLPLPGNVEVL CEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEECHHHHHHHHCCCCEEEEECCCCHHHH ARQIADESRQQPLRLIGIISRFALPLGIEVARRIQAAARSADMIVHSFLTVALGHLYATQ HHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YGLPECAVDLFPFFDPPADIANIAWPTDRIGLAGRRLSHVFAHTIFRYTQSLSYRILHRR CCCCHHHHHHCCCCCCCCCHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC APDIGPSRLPWAAPGRQFGLLQAYSAVLVPPGSAPLTVQTGSWWLEATNWQPPPDLQAFL CCCCCCCCCCCCCCCCHHHHHHHCCEEEECCCCCCEEEECCCEEEEECCCCCCCCHHHHH AAGPPPVVISFGSMATHDAPHIARIVLETLQRTGQRGIIQRGWAGLTPHQVPDTIYLADE HCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCEEEEECC MPHDWLLPRASAMIHHGGAGTTASALRAGIPSVIVPFAADQPFWAWRAHKTGANPPPIPV CCCHHCCCCHHHHEECCCCCCHHHHHHCCCCCEEEECCCCCCCEEEECCCCCCCCCCCCH SALSVERLSLALQQALDPVHRARAAMVSGRMRAEGGVAVAVQRIEQWAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]