Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222525771

Identifier: 222525771

GI number: 222525771

Start: 3172241

End: 3173050

Strand: Reverse

Name: 222525771

Synonym: Chy400_2524

Alternate gene names: NA

Gene position: 3173050-3172241 (Counterclockwise)

Preceding gene: 222525772

Following gene: 222525770

Centisome position: 60.22

GC content: 58.02

Gene sequence:

>810_bases
ATGCCCCTGGTTACCGATCAGGCCATGGCCTTGCCTGATGGCTATCGCCATATTGTGTTGTCGCCGCATCTTGATGATGC
GGCGCTTTCCTGTGGCGGCTTGATTGCCCGCCTGACTGCAACCGGCGAACGGGTGCTGGTTGTTAATATCTGTAGCGGCT
CTCCGCCGAGTCATACGGAATTCAGCCCGTTTGCACAAACCCTCCATCAGCGCTGGGGCTTACCACCATCGGCAGTGGTG
GCTCATCGTCGCGTCGAAGACGCTGCCGCGCTGGGAGTGCTTGGCGCTGATGCACTATTACTGCCGGCACTGGACGCCAT
CTACCGCCGACCTGATGCGTATGCCGACGAGCAGAGTCTCTTTGCAACACCGGTCGTCGATGATCCCCTTACCGATGTGG
TGGCGACCCTGATCGCGACTCTGATCAAACGCTATCCGCGAGCCACGTTCTATGTGCCGCTGGCGGTGGGTATGCACGTC
GATCATCAACTGGTCTTCAGCGCAGCAACGACCAGTTTGTGCGCAGCCGCTATCCATTTCGCCTGCTATGAAGACTTTCC
GTATGCCCGTCAGCCGTCAGCGGTTGAACAACGCCTGGCAATGATCGGTCGTGAGTTGTATGCTCCACGCTACATTCCAC
TTGATGAGACACTGCTCCAGGCAAAGATCAGGGCAATTTCCGCCTATTCCAGCCAGTTGGGCGTCCTCTTCGGCAATGCA
GCAGCGATGCCGGCTGCGGTAACCGAATATGCGGCGCGTGTCGCTTCACCGACAATGCGCTATGCCGAACGGCAATGGGT
GAGTTTATGA

Upstream 100 bases:

>100_bases
CCGCATTCTGAAGCGGATCGCCCGTTCACGCGACGAGGTGCGCGCCCAGGTTGCCCAGGATGCGCTCGCTGAACTCGACC
TTGATACCCTCTGAGGATGT

Downstream 100 bases:

>100_bases
AGGGTCGGTGGCGGGTTGATGTTCCATCTGCCGCGCAGTGGGATGCCTTTGTTGCTTCCCATCCCCAGGGAAATGTGTTG
CAGGCCAGTCCGTGGGGTGC

Product: LmbE family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MPLVTDQAMALPDGYRHIVLSPHLDDAALSCGGLIARLTATGERVLVVNICSGSPPSHTEFSPFAQTLHQRWGLPPSAVV
AHRRVEDAAALGVLGADALLLPALDAIYRRPDAYADEQSLFATPVVDDPLTDVVATLIATLIKRYPRATFYVPLAVGMHV
DHQLVFSAATTSLCAAAIHFACYEDFPYARQPSAVEQRLAMIGRELYAPRYIPLDETLLQAKIRAISAYSSQLGVLFGNA
AAMPAAVTEYAARVASPTMRYAERQWVSL

Sequences:

>Translated_269_residues
MPLVTDQAMALPDGYRHIVLSPHLDDAALSCGGLIARLTATGERVLVVNICSGSPPSHTEFSPFAQTLHQRWGLPPSAVV
AHRRVEDAAALGVLGADALLLPALDAIYRRPDAYADEQSLFATPVVDDPLTDVVATLIATLIKRYPRATFYVPLAVGMHV
DHQLVFSAATTSLCAAAIHFACYEDFPYARQPSAVEQRLAMIGRELYAPRYIPLDETLLQAKIRAISAYSSQLGVLFGNA
AAMPAAVTEYAARVASPTMRYAERQWVSL
>Mature_268_residues
PLVTDQAMALPDGYRHIVLSPHLDDAALSCGGLIARLTATGERVLVVNICSGSPPSHTEFSPFAQTLHQRWGLPPSAVVA
HRRVEDAAALGVLGADALLLPALDAIYRRPDAYADEQSLFATPVVDDPLTDVVATLIATLIKRYPRATFYVPLAVGMHVD
HQLVFSAATTSLCAAAIHFACYEDFPYARQPSAVEQRLAMIGRELYAPRYIPLDETLLQAKIRAISAYSSQLGVLFGNAA
AMPAAVTEYAARVASPTMRYAERQWVSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29087; Mature: 28956

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLVTDQAMALPDGYRHIVLSPHLDDAALSCGGLIARLTATGERVLVVNICSGSPPSHTE
CCCCCCCHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCC
FSPFAQTLHQRWGLPPSAVVAHRRVEDAAALGVLGADALLLPALDAIYRRPDAYADEQSL
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCE
FATPVVDDPLTDVVATLIATLIKRYPRATFYVPLAVGMHVDHQLVFSAATTSLCAAAIHF
EECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
ACYEDFPYARQPSAVEQRLAMIGRELYAPRYIPLDETLLQAKIRAISAYSSQLGVLFGNA
HHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCC
AAMPAAVTEYAARVASPTMRYAERQWVSL
HHHHHHHHHHHHHHCCHHHHHHHHHHCCC
>Mature Secondary Structure 
PLVTDQAMALPDGYRHIVLSPHLDDAALSCGGLIARLTATGERVLVVNICSGSPPSHTE
CCCCCCHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCC
FSPFAQTLHQRWGLPPSAVVAHRRVEDAAALGVLGADALLLPALDAIYRRPDAYADEQSL
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCE
FATPVVDDPLTDVVATLIATLIKRYPRATFYVPLAVGMHVDHQLVFSAATTSLCAAAIHF
EECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
ACYEDFPYARQPSAVEQRLAMIGRELYAPRYIPLDETLLQAKIRAISAYSSQLGVLFGNA
HHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCC
AAMPAAVTEYAARVASPTMRYAERQWVSL
HHHHHHHHHHHHHHCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA