| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525772
Identifier: 222525772
GI number: 222525772
Start: 3173057
End: 3173968
Strand: Reverse
Name: 222525772
Synonym: Chy400_2525
Alternate gene names: NA
Gene position: 3173968-3173057 (Counterclockwise)
Preceding gene: 222525773
Following gene: 222525771
Centisome position: 60.24
GC content: 57.35
Gene sequence:
>912_bases ATGACGCTGAGTTTTGCCGAGCGTGTCGCTCAACTTGATACTGCTGAGACTGCCCCAACCCGCGTCGATCTGAAATTGCT GGCCAACCTGGGACCAGAGAGTGTGTACATCTTCTGGGAGCAGTGGCAGCGGTTTAGTCTGGATCGCCGACGCCATATTA TGCACTTGCTGGCCGAGCTGGCTGAAGAGCAGATTCAGCTTGATTACCGACCGGTGTTTCGTGCCTGCCTGGCCGATCAC GATGCTGAGATTCGGGTGCTGGCGATTGAAGGGCTGTGGGAAGATGATCACGAGCAGATGATGGATCGTCTGATCCAGAT GATCCACGATCCGGCTGGCGAAGTGCGGGCAGCCGCAGTGATCAGTCTGGCCCGCTTTGCCTATCGGGCTGAAATCGGTG AATTATCGCTCAGTGCTGCCCAGCGACTGCTTAACGCATTGCTCCAGACTGCTTCTGACCCTGAACAACCATCAGAAGTA CGCCGGCGTGCAGTTGAGGCATTGGGGTATTTTGCCGATTCACAAGAAGCGCAGGCATTGGTTGCCCGTGCCTATAGTAT GGACGACATCTATATGCGCGAGAGCGCCGTCCTGGCAATGGGCCGCTCGATGCGACCGCAGTGGTTTCCGTACATTTTGC GTGAGTTGAAGAGTCCATCGCCATCACTGCGCTACGAAGCAGCACGCGCTGTGGGTGAGATCGGTGAAGATGGACGTGAG TTGCTCCCTGCATTGTTACCGCTGGTCGATGATGAAGATACCGAGATTGCACTGGCTGCAATCTGGGCGCTTGGGCAGGT TGGTGGCTCCGATGCCCGCCGCATTCTGAAGCGGATCGCCCGTTCACGCGACGAGGTGCGCGCCCAGGTTGCCCAGGATG CGCTCGCTGAACTCGACCTTGATACCCTCTGA
Upstream 100 bases:
>100_bases CCGCCGAAGTGGACGCTATATTGAAGAAGATGAGTAGATGTGACAGGCGGCGATCACCAACCCTGATCGCCGCCTGATTG TCATCGTATACAGGTTTACC
Downstream 100 bases:
>100_bases GGATGTATGCCCCTGGTTACCGATCAGGCCATGGCCTTGCCTGATGGCTATCGCCATATTGTGTTGTCGCCGCATCTTGA TGATGCGGCGCTTTCCTGTG
Product: PBS lyase HEAT domain-containing protein repeat-containing protein
Products: NA
Alternate protein names: PBS Lyase HEAT Domain Protein Repeat-Containing Protein; HEAT Domain-Containing Protein; PBS Lyase Heat-Like Repeat Domain Protein; Heat Domain-Containing Protein; Phycocyanin Alpha Phycocyanobilin Lyase Related Protein; PBS Lyase HEAT-Like Repeat Domain Protein
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MTLSFAERVAQLDTAETAPTRVDLKLLANLGPESVYIFWEQWQRFSLDRRRHIMHLLAELAEEQIQLDYRPVFRACLADH DAEIRVLAIEGLWEDDHEQMMDRLIQMIHDPAGEVRAAAVISLARFAYRAEIGELSLSAAQRLLNALLQTASDPEQPSEV RRRAVEALGYFADSQEAQALVARAYSMDDIYMRESAVLAMGRSMRPQWFPYILRELKSPSPSLRYEAARAVGEIGEDGRE LLPALLPLVDDEDTEIALAAIWALGQVGGSDARRILKRIARSRDEVRAQVAQDALAELDLDTL
Sequences:
>Translated_303_residues MTLSFAERVAQLDTAETAPTRVDLKLLANLGPESVYIFWEQWQRFSLDRRRHIMHLLAELAEEQIQLDYRPVFRACLADH DAEIRVLAIEGLWEDDHEQMMDRLIQMIHDPAGEVRAAAVISLARFAYRAEIGELSLSAAQRLLNALLQTASDPEQPSEV RRRAVEALGYFADSQEAQALVARAYSMDDIYMRESAVLAMGRSMRPQWFPYILRELKSPSPSLRYEAARAVGEIGEDGRE LLPALLPLVDDEDTEIALAAIWALGQVGGSDARRILKRIARSRDEVRAQVAQDALAELDLDTL >Mature_302_residues TLSFAERVAQLDTAETAPTRVDLKLLANLGPESVYIFWEQWQRFSLDRRRHIMHLLAELAEEQIQLDYRPVFRACLADHD AEIRVLAIEGLWEDDHEQMMDRLIQMIHDPAGEVRAAAVISLARFAYRAEIGELSLSAAQRLLNALLQTASDPEQPSEVR RRAVEALGYFADSQEAQALVARAYSMDDIYMRESAVLAMGRSMRPQWFPYILRELKSPSPSLRYEAARAVGEIGEDGREL LPALLPLVDDEDTEIALAAIWALGQVGGSDARRILKRIARSRDEVRAQVAQDALAELDLDTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34181; Mature: 34050
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: PS50077 HEAT_REPEAT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSFAERVAQLDTAETAPTRVDLKLLANLGPESVYIFWEQWQRFSLDRRRHIMHLLAEL CCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH AEEQIQLDYRPVFRACLADHDAEIRVLAIEGLWEDDHEQMMDRLIQMIHDPAGEVRAAAV HHHHHHCCHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHH ISLARFAYRAEIGELSLSAAQRLLNALLQTASDPEQPSEVRRRAVEALGYFADSQEAQAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHH VARAYSMDDIYMRESAVLAMGRSMRPQWFPYILRELKSPSPSLRYEAARAVGEIGEDGRE HHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHH LLPALLPLVDDEDTEIALAAIWALGQVGGSDARRILKRIARSRDEVRAQVAQDALAELDL HHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DTL CCC >Mature Secondary Structure TLSFAERVAQLDTAETAPTRVDLKLLANLGPESVYIFWEQWQRFSLDRRRHIMHLLAEL CCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH AEEQIQLDYRPVFRACLADHDAEIRVLAIEGLWEDDHEQMMDRLIQMIHDPAGEVRAAAV HHHHHHCCHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHH ISLARFAYRAEIGELSLSAAQRLLNALLQTASDPEQPSEVRRRAVEALGYFADSQEAQAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHH VARAYSMDDIYMRESAVLAMGRSMRPQWFPYILRELKSPSPSLRYEAARAVGEIGEDGRE HHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHH LLPALLPLVDDEDTEIALAAIWALGQVGGSDARRILKRIARSRDEVRAQVAQDALAELDL HHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DTL CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA