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The map label for this gene is rhaB [H]

Identifier: 222525708

GI number: 222525708

Start: 3102327

End: 3103763

Strand: Reverse

Name: rhaB [H]

Synonym: Chy400_2459

Alternate gene names: 222525708

Gene position: 3103763-3102327 (Counterclockwise)

Preceding gene: 222525709

Following gene: 222525706

Centisome position: 58.91

GC content: 60.26

Gene sequence:

>1437_bases
ATGACAGAACTGGCACATTTTATTGCGATTGACATCGGTGCTTCGAGCGGGCGCGTCATTCTAGGGCGTTGGGACGGCAC
ACGCTTCACCCTGGAGGAGATCCATCGCTTTCCGAATGGGATGATCGAGCGTGACGGTCATCTGTTTTGGGATGTCAATC
GACTCTGGCACGAGGTGCAGCACGGACTGCGTACCTACGCCCGTCACGAGCAATCAAGCCGGTTAGCCAGCATTGGGATC
GACACCTGGGCAGTCGATTACGGCCTGATTGATGAAGCGGGTAATCTCATCGGTGATCCCTTCGCCTACCGCGATGCTCG
CAATGAAGGCATGGCCGAGCGAGTTGATGCGATTATCCCGCCGACCGAACTATATGAGCGTACCGGGCTGCAACGGCTCC
CTTTCAACACCCTCTACCAGTTGTACGCCGAACGGCAGGGTGACCGCTTGCCGCGAGCAGCCACGATGTTGCTTATACCC
GATCTCTTTCACTACTGGCTGACCGGGAAACGGGTCGCCGAGTATACCAATGCGTCAACGACCATGTTCCTCGATGCCCG
ACGACGGGTATGGGCAACCGATCTCCTGGAGCGGTTGGGCATCCCAACTCACTTGCTACCACCACTGGTTATGCCGGGAA
CGCCGCTTGGCCCTCTCGTGCCCGAACTGCGTGAAGCGCTCGGACTGCCGGGCAACGTTACGGTGGTGGCGGTCGGCACG
CACGACACCGCCAGTGCCGTTGCTGCCGTACCTCACCTTGATGCCCAGAGCGCCTACATCAGTAGTGGGACGTGGAGCCT
GGTAGGGGTGGAGCGCAGCGAACCACTGATCAATGAAGCTGCCCGCCGCCTGAACGTGACGAACGAAGGTGGCGTGTATG
GAACGATTCGCCTGCTCAAAAATGTCAGCGGATTATGGCTCTTGCAAGAGTGTCAGCGCTGCTGGCAGGCCGATGGCCTG
AACCTGAGTTGGGATGCGATCATCGCGCAGGCTGCTGCTGCACCAGCAGGACGTTCATATATCGACCCCGACGCGCCAGA
ATTCCTGGCCGTTGGCGACATGCCGGCCCGCATCCGCGAATACTGCCGACGCAATGGTCAGCCCGTACCAGAGACGGTAG
GCGAGATTGCCCGCTGCTGCCTCGATAGCCTGGCGTTACGTTACCGAGAGGTCATTGATGCGCTGGCCGATCTCACCGGT
CAACCGATCACGACGGTACGGATTGTTGGTGGCGGCAGTCAGAACACGCTCCTCTGCCAGTTAACGGCCGATCTGTGCCG
GCGACCGGTAGTTGCCGGGCCAACCGAAGGCACGGCCCTGGGCAACATTCTGGTGCAGGCGATAGCGATGGGGTATCTGC
CTGATCTGGCGACGGCACGGCAGGTTGCTGCGGCGTCGGTCAGCCAGACTACATACCGGCCGGGGGTGTTGATGTGA

Upstream 100 bases:

>100_bases
TTTCCTGCTCCTGAGCCAGCGGCTGAGTCAGACAACCGGCCAGATCATCACGGTTGACGGCGGACTCCACGAAGCCTTCC
TGCGTTGAGGGGGCAACACC

Downstream 100 bases:

>100_bases
GGATTGGGTGGCGCGGTGACCGAATGAGGAACAGGTGAAGCCACCGCGCGCCCGCACCTCGGCCACGGGAAGAGCAGAGG
TGCGGGGAAGTGGTGTACGT

Product: carbohydrate kinase FGGY

Products: NA

Alternate protein names: Rhamnulose kinase [H]

Number of amino acids: Translated: 478; Mature: 477

Protein sequence:

>478_residues
MTELAHFIAIDIGASSGRVILGRWDGTRFTLEEIHRFPNGMIERDGHLFWDVNRLWHEVQHGLRTYARHEQSSRLASIGI
DTWAVDYGLIDEAGNLIGDPFAYRDARNEGMAERVDAIIPPTELYERTGLQRLPFNTLYQLYAERQGDRLPRAATMLLIP
DLFHYWLTGKRVAEYTNASTTMFLDARRRVWATDLLERLGIPTHLLPPLVMPGTPLGPLVPELREALGLPGNVTVVAVGT
HDTASAVAAVPHLDAQSAYISSGTWSLVGVERSEPLINEAARRLNVTNEGGVYGTIRLLKNVSGLWLLQECQRCWQADGL
NLSWDAIIAQAAAAPAGRSYIDPDAPEFLAVGDMPARIREYCRRNGQPVPETVGEIARCCLDSLALRYREVIDALADLTG
QPITTVRIVGGGSQNTLLCQLTADLCRRPVVAGPTEGTALGNILVQAIAMGYLPDLATARQVAAASVSQTTYRPGVLM

Sequences:

>Translated_478_residues
MTELAHFIAIDIGASSGRVILGRWDGTRFTLEEIHRFPNGMIERDGHLFWDVNRLWHEVQHGLRTYARHEQSSRLASIGI
DTWAVDYGLIDEAGNLIGDPFAYRDARNEGMAERVDAIIPPTELYERTGLQRLPFNTLYQLYAERQGDRLPRAATMLLIP
DLFHYWLTGKRVAEYTNASTTMFLDARRRVWATDLLERLGIPTHLLPPLVMPGTPLGPLVPELREALGLPGNVTVVAVGT
HDTASAVAAVPHLDAQSAYISSGTWSLVGVERSEPLINEAARRLNVTNEGGVYGTIRLLKNVSGLWLLQECQRCWQADGL
NLSWDAIIAQAAAAPAGRSYIDPDAPEFLAVGDMPARIREYCRRNGQPVPETVGEIARCCLDSLALRYREVIDALADLTG
QPITTVRIVGGGSQNTLLCQLTADLCRRPVVAGPTEGTALGNILVQAIAMGYLPDLATARQVAAASVSQTTYRPGVLM
>Mature_477_residues
TELAHFIAIDIGASSGRVILGRWDGTRFTLEEIHRFPNGMIERDGHLFWDVNRLWHEVQHGLRTYARHEQSSRLASIGID
TWAVDYGLIDEAGNLIGDPFAYRDARNEGMAERVDAIIPPTELYERTGLQRLPFNTLYQLYAERQGDRLPRAATMLLIPD
LFHYWLTGKRVAEYTNASTTMFLDARRRVWATDLLERLGIPTHLLPPLVMPGTPLGPLVPELREALGLPGNVTVVAVGTH
DTASAVAAVPHLDAQSAYISSGTWSLVGVERSEPLINEAARRLNVTNEGGVYGTIRLLKNVSGLWLLQECQRCWQADGLN
LSWDAIIAQAAAAPAGRSYIDPDAPEFLAVGDMPARIREYCRRNGQPVPETVGEIARCCLDSLALRYREVIDALADLTGQ
PITTVRIVGGGSQNTLLCQLTADLCRRPVVAGPTEGTALGNILVQAIAMGYLPDLATARQVAAASVSQTTYRPGVLM

Specific function: Metabolism of L-rhamnose; second step. [C]

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rhamnulokinase family [H]

Homologues:

Organism=Escherichia coli, GI1790338, Length=473, Percent_Identity=43.1289640591966, Blast_Score=359, Evalue=1e-100,
Organism=Escherichia coli, GI1789168, Length=465, Percent_Identity=24.5161290322581, Blast_Score=109, Evalue=3e-25,
Organism=Escherichia coli, GI1787789, Length=467, Percent_Identity=21.4132762312634, Blast_Score=62, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018484
- InterPro:   IPR013449 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.5 [H]

Molecular weight: Translated: 52450; Mature: 52318

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTELAHFIAIDIGASSGRVILGRWDGTRFTLEEIHRFPNGMIERDGHLFWDVNRLWHEVQ
CCCCEEEEEEEECCCCCCEEEEECCCCEEEHHHHHHCCCCCEECCCCEEEEHHHHHHHHH
HGLRTYARHEQSSRLASIGIDTWAVDYGLIDEAGNLIGDPFAYRDARNEGMAERVDAIIP
HHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHCCCCCCCCHHHHHHCCCCHHHHHHHCCC
PTELYERTGLQRLPFNTLYQLYAERQGDRLPRAATMLLIPDLFHYWLTGKRVAEYTNAST
CHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCE
TMFLDARRRVWATDLLERLGIPTHLLPPLVMPGTPLGPLVPELREALGLPGNVTVVAVGT
EEEEHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECC
HDTASAVAAVPHLDAQSAYISSGTWSLVGVERSEPLINEAARRLNVTNEGGVYGTIRLLK
CCHHHHHHHCCCCCCCCCEECCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHH
NVSGLWLLQECQRCWQADGLNLSWDAIIAQAAAAPAGRSYIDPDAPEFLAVGDMPARIRE
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHH
YCRRNGQPVPETVGEIARCCLDSLALRYREVIDALADLTGQPITTVRIVGGGSQNTLLCQ
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEE
LTADLCRRPVVAGPTEGTALGNILVQAIAMGYLPDLATARQVAAASVSQTTYRPGVLM
EEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TELAHFIAIDIGASSGRVILGRWDGTRFTLEEIHRFPNGMIERDGHLFWDVNRLWHEVQ
CCCEEEEEEEECCCCCCEEEEECCCCEEEHHHHHHCCCCCEECCCCEEEEHHHHHHHHH
HGLRTYARHEQSSRLASIGIDTWAVDYGLIDEAGNLIGDPFAYRDARNEGMAERVDAIIP
HHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHCCCCCCCCHHHHHHCCCCHHHHHHHCCC
PTELYERTGLQRLPFNTLYQLYAERQGDRLPRAATMLLIPDLFHYWLTGKRVAEYTNAST
CHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCE
TMFLDARRRVWATDLLERLGIPTHLLPPLVMPGTPLGPLVPELREALGLPGNVTVVAVGT
EEEEHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECC
HDTASAVAAVPHLDAQSAYISSGTWSLVGVERSEPLINEAARRLNVTNEGGVYGTIRLLK
CCHHHHHHHCCCCCCCCCEECCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHH
NVSGLWLLQECQRCWQADGLNLSWDAIIAQAAAAPAGRSYIDPDAPEFLAVGDMPARIRE
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHH
YCRRNGQPVPETVGEIARCCLDSLALRYREVIDALADLTGQPITTVRIVGGGSQNTLLCQ
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEE
LTADLCRRPVVAGPTEGTALGNILVQAIAMGYLPDLATARQVAAASVSQTTYRPGVLM
EEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12663928 [H]